Ades011498.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000008.1:6145664-6152803[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00015 0.013 16.4 2.1 1 23 97 119 97 119 0.97 2 13 0.001 0.086 13.8 2.9 1 23 202 224 202 224 0.97 3 13 0.00015 0.013 16.4 0.1 1 23 234 257 234 257 0.97 4 13 3.8e-05 0.0032 18.3 2.0 1 23 263 286 263 286 0.91 5 13 1.6e-06 0.00014 22.6 0.3 3 23 298 318 296 318 0.98 6 13 8.7e-05 0.0074 17.2 0.7 1 23 328 351 328 351 0.97 7 13 8.2e-07 6.9e-05 23.5 3.6 1 23 357 380 357 380 0.98 8 13 7.7e-05 0.0065 17.3 4.1 1 23 390 412 390 412 0.97 9 13 1.1e-05 0.00094 20.0 1.4 1 21 422 442 422 443 0.95 10 13 3.8e-05 0.0032 18.3 4.1 1 23 447 469 447 469 0.94 11 13 0.00039 0.033 15.1 3.2 1 23 479 502 479 502 0.97 12 13 0.00013 0.011 16.7 1.7 1 23 508 531 508 531 0.96 13 13 0.00024 0.021 15.8 2.3 1 21 541 561 541 562 0.95
Sequence Information
- Coding Sequence
- ATGGATAAATCTGGCACAAATATCAGTTTAcaagaagatatgaaacaccAGTCTTTCTCACTGTCCAAACAGGAATCCTCCTCTTTCCCAGTTTcccagaagaagaaaattgcgaAGATAATTTCTGCCACTGTAGCAAGATCAGGATTAGAAGGGGAACAGAATGGACATGATGGTTCAGAAAATATTGTAAGAAAGAAACAAGGAGTTTGTGATATTTCGAAAAAAGGTAGAAGTATAAGTAACCCCATGATTGCGCACGTAGAAAAACCAAAACCTATGCGAGTTTTTTGTTGTAACGTTTGTCAAAAGGGATTCAAATGGAAAGGAAATTTGACTAGACATCTACTCATCCACGAACCCAATCGTCTATTGGAGAAACCATTTAGTTGTGGAGAATTTTcccagaagaagaaaattgcaaaGATAATTTCTGCCACTGTAACAAGATCAGGATTAGAAGGGGAACGGAATGGACATGATGGTTCAGAAAGTATTATAAGAAAGAAACAAAGAGTTTGTGATATTTTGAGCAAAGCTAGAAGTATAAGTAGGCCTAACCCTATAATTGCGCATGTAGAAAAACCAAAACCTATGCAAGTTTTTTGTTGTGACACTTGTCAGAAGGGATTCAAgtggaaacaaaatttgaccAGACATCTGATCATCCACAGAACCAACTGTCTATTGGAGGAATCATTTAGTTGTGAAGAATGTGAGAATCTGTTCTCCCGGAAGCCAGATTTGGAACGACACATTCTATCTGTACACTACAATCAGAAACGTCATATTTGTAATCACTGTAAAAAGGCGTTCCGAGATAAAGCCGGGCTTAAAAATCATACGGGAGTAGTTCATCTGAAAGATTCTAAGTTTACAAAACGATTTGGATGTGAAAACTGTGGGAGAGCTTTCTCGCAGAGAAGTAATTTGATTCTTCATCTTCAGTCGCATGAGACTAAAGTTCAATTGAGAAGACCGTTCAAGTGCGCGGAATGTAAAAAACGTTTTTTGAACAAATCACTCCTGAAGGAACATATTTTAGTATTACACTTGAATCAGAGACAATATACTTGTCACTATTGTCAGAAAGCTTTTGGCTATAAGTCTAGCCTTACAAAACACATTAAGTCAATCCACCTGAATGATACCAATTATATGAAACGCTTTGTGTGCCTGAACTGCAAGAAAAGGTTTTGTTCTCAATATTCTTTAACTCAGCATCTCCAAGCTCATCAAAGAGGTCTCCTAGAGAGAAAACTATTCAGTTGTAGCAGGTGTCAAGCAAGCTTCACACAAAAGAGTAATTTGAAACGACACGTTAAAAATCAAAAATCTCATGCTTGTAACCACTGTAAAAAGGCGTTTCGAAATAAAGCTGAACTTAAAAATCATACGGGATCGCATGAGACCAAAGTTCAGTTGAGAAAACCGTTCAAGTGCGCGGAATGTAGAAaacgttttttgaagaaatcacATCTGAAACAACATATTTTGGTATTACACTCGAATCAAAGACAATATATTTGTGACTATTGTAAGAAAGCGTTTGGAAAGAAGCATACTGTTACAAGACACATTGAGTCAATCCACCTAAGAGATCTCAATTATATGAAACGCTTTGTGtgcaaaaaatgcaaaaaaggtTTTTGTTCTGAAAATGGTTTAACTCGGCATCTTCAGAATCAAAAGTCCTCTAGAGAAGAAACTATTTAG
- Protein Sequence
- MDKSGTNISLQEDMKHQSFSLSKQESSSFPVSQKKKIAKIISATVARSGLEGEQNGHDGSENIVRKKQGVCDISKKGRSISNPMIAHVEKPKPMRVFCCNVCQKGFKWKGNLTRHLLIHEPNRLLEKPFSCGEFSQKKKIAKIISATVTRSGLEGERNGHDGSESIIRKKQRVCDILSKARSISRPNPIIAHVEKPKPMQVFCCDTCQKGFKWKQNLTRHLIIHRTNCLLEESFSCEECENLFSRKPDLERHILSVHYNQKRHICNHCKKAFRDKAGLKNHTGVVHLKDSKFTKRFGCENCGRAFSQRSNLILHLQSHETKVQLRRPFKCAECKKRFLNKSLLKEHILVLHLNQRQYTCHYCQKAFGYKSSLTKHIKSIHLNDTNYMKRFVCLNCKKRFCSQYSLTQHLQAHQRGLLERKLFSCSRCQASFTQKSNLKRHVKNQKSHACNHCKKAFRNKAELKNHTGSHETKVQLRKPFKCAECRKRFLKKSHLKQHILVLHSNQRQYICDYCKKAFGKKHTVTRHIESIHLRDLNYMKRFVCKKCKKGFCSENGLTRHLQNQKSSREETI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -