Ades005361.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- su(Hw)
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000002.1:41907452-41911125[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00054 0.046 14.7 0.1 3 21 45 63 43 64 0.95 2 13 0.0018 0.16 13.0 0.4 1 23 167 190 167 190 0.96 3 13 0.021 1.8 9.7 3.0 3 23 198 218 196 218 0.98 4 13 2.6e-05 0.0022 18.8 1.5 2 19 226 243 225 246 0.93 5 13 8.8e-06 0.00074 20.3 0.8 1 23 257 279 257 279 0.97 6 13 0.016 1.3 10.1 0.7 1 23 289 311 289 311 0.97 7 13 5.7e-06 0.00048 20.9 2.9 1 23 317 339 317 339 0.96 8 13 0.00029 0.025 15.5 0.9 1 23 345 367 345 367 0.99 9 13 0.0001 0.0087 16.9 3.2 1 23 373 395 373 395 0.95 10 13 0.00012 0.01 16.7 0.5 1 23 401 424 401 424 0.95 11 13 1.8e-06 0.00015 22.5 0.2 1 23 430 452 430 452 0.94 12 13 1.6e-06 0.00013 22.6 0.8 1 23 458 480 458 480 0.98 13 13 7.8e-07 6.6e-05 23.6 2.0 2 23 487 509 487 509 0.97
Sequence Information
- Coding Sequence
- ATGGATGTGGAGGATGTTTATGATTTCAATGACGATCAAGATGAATTGAATGTAGTAGATCCAAAAGCGGATTCGAAACGTAAGAAAACAAATCGAATAACTGAACAGAATGGTTTGAGGAAAGAATTTGGCTGTGAATTATGTGATCGAAGCTTTACGACCGTAGCGGGGTTGAAACGACACACTAAAGCTTGTGAGAAAATCAAAGAAGAATATACCGAACCGCAACAAGACATCGAAAATGAAATCATGGCTGACGACGAATACTTGCTGCCTTCTGGTGCCGTGGAAGAGTTTGAAGCTAAAGAAGGAgacgatgatgaagaagaaattgacgAAACGGATATCACGAACAACATACAAAATGTTGACGTTTCAAATTTGCCAGAAGACGTGAACATGTCAAATTATAAAGAATTGGGTATCACTACGTACATCCAACCAGGAAAGTGTGATTGTTGCGGTGAACCTGTTGATACAGCGCATACGGATGGTGAATACGAATGTGTTGATTGTACTTTCTTCCTTTCAACATCCGAAGCCTTAACACGTCATAGAACTATGGTTCACGATGAAGGAGAAACATTTGGCTGTAGTAAATGTTCCGTCCGATGTCCAGATAAGAAATCCTTGAAGTATCATACCCGCGTACATAATCCAAACTTCAAGCCAGTATCGTGCCCGGTTTGTCATAAACAGTTCAGTCGAAAATACCATTTAGTTCGACACAATATGCAAACTGGATGTGACGGATCAGAGagaccgacttttccttgtcaGGTGTGCATGCGTACGTTTACGCGGAAGGATAATTTGAGAGAACATCTCCGCGCACATGCTGGACAAACAAAACGTAAACAGAAGTATACATGCGAGTATTGTAATCAAGAGTTTGCTGGAATGTTTGTTCTAAATCAACACAAAAAACTACATTTAGGAGACAAACCGCACGCTTGCGATTTgtgtgaaaagaaattttcaacgagTGGAGCACTCAAGAAACATCGTAGAAAACACACTGGAGAAAGACCGTACGAATGCAAACAATGCTTCGCTAAATTTGCTGCAAAAGAAACTCTCAATCGGCATACGCGCATTCATACTGGAGACAAACCGCACTCCTGTCTGTTTTGTGGAAAGAGTTTCATTCAGGCGACTCAGTTACGAGCTCATATTTTTCACCATACTGGTGAAAATGGTTTTACATGCGAGGTGTGCGGTAAAGCATTTAACCGAAGAACGCGTTTGGATTTGCACGTAAAATATGTGCACGAGGGTGCAAAACCTTTTGATTGTGAAAAATGCGGCAAATCATTTATTCGTAAAGAGGACTTGGCTCGTCATGAAATTCTCCATTCGGGAGTCAAAGCTCACAAATGCCCGATTTGTGAAAAAGGTTTTGCCATGAAATCATCGTTGAAAATACATTTATTGACACACACTAAGgagCCTCCTCGTTCTTGTGATGAATGTGGTCGCGCGTTTATTAGACAAGATTGCTTGCTTCGTCATATGCGAACAAAACACCGAGAAATGTTGGAAGAGATCATGGCTGAAgcggaaaagaagaaattgcaAGCGCAACTCTTAGCGGTAGCAGCGGCCAGCACTAACGAAGAGGAGAACGAAGGCAACGACAGCGAAGAATTTCAAACTTATCTTCCAGATGATGCTCTTACTGAATCCATTGGTCAGCTTCTGACATTATTAGTCGACGAAACCACGTTGAAATCATTTGGTTGGCCCTCTACATCCATAGATAAGCTTTTGGAGTCAGTAATCAGaCGTTGTGGGCACGCTCCAGCTACTGCAGACGATCTACCTTACCCGGATTGTCTCAGAGAGAATGCCAAACTGCTGTTTACAGTTGTGATCGATGATTCCGCCGTGAAAACCCTATTAAATAACCAAACTGTGGACGAAGTCATAATGCATGTGCTGAAACTTGCAAAGACCTGA
- Protein Sequence
- MDVEDVYDFNDDQDELNVVDPKADSKRKKTNRITEQNGLRKEFGCELCDRSFTTVAGLKRHTKACEKIKEEYTEPQQDIENEIMADDEYLLPSGAVEEFEAKEGDDDEEEIDETDITNNIQNVDVSNLPEDVNMSNYKELGITTYIQPGKCDCCGEPVDTAHTDGEYECVDCTFFLSTSEALTRHRTMVHDEGETFGCSKCSVRCPDKKSLKYHTRVHNPNFKPVSCPVCHKQFSRKYHLVRHNMQTGCDGSERPTFPCQVCMRTFTRKDNLREHLRAHAGQTKRKQKYTCEYCNQEFAGMFVLNQHKKLHLGDKPHACDLCEKKFSTSGALKKHRRKHTGERPYECKQCFAKFAAKETLNRHTRIHTGDKPHSCLFCGKSFIQATQLRAHIFHHTGENGFTCEVCGKAFNRRTRLDLHVKYVHEGAKPFDCEKCGKSFIRKEDLARHEILHSGVKAHKCPICEKGFAMKSSLKIHLLTHTKEPPRSCDECGRAFIRQDCLLRHMRTKHREMLEEIMAEAEKKKLQAQLLAVAAASTNEEENEGNDSEEFQTYLPDDALTESIGQLLTLLVDETTLKSFGWPSTSIDKLLESVIRRCGHAPATADDLPYPDCLRENAKLLFTVVIDDSAVKTLLNNQTVDEVIMHVLKLAKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -