Ades017209.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000015.1:4590987-4592318[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.4e-06 0.00029 21.6 1.6 1 23 25 48 25 48 0.97 2 13 0.00037 0.032 15.2 0.1 1 23 53 76 53 76 0.95 3 13 0.0032 0.27 12.2 4.2 2 23 82 104 81 104 0.91 4 13 5.1e-05 0.0043 17.9 1.3 1 23 109 132 109 132 0.96 5 13 1.7e-06 0.00015 22.5 0.8 3 23 139 160 137 160 0.97 6 13 3.2e-05 0.0027 18.5 1.0 1 23 166 189 166 189 0.95 7 13 2.8e-06 0.00024 21.9 0.8 1 23 194 217 194 217 0.97 8 13 0.00018 0.015 16.2 4.5 3 23 224 245 224 245 0.96 9 13 2.4e-05 0.002 18.9 0.5 1 23 250 273 250 273 0.96 10 13 4.2e-06 0.00036 21.3 1.9 1 23 278 301 278 301 0.96 11 13 3.5e-08 3e-06 27.8 1.2 1 23 306 329 306 329 0.97 12 13 2.1e-06 0.00018 22.2 1.3 1 23 334 357 334 357 0.95 13 13 5.7e-06 0.00049 20.9 0.5 1 21 362 382 362 383 0.94
Sequence Information
- Coding Sequence
- ATGCTGCACAATAACAAAATGGACGAGTATAATTGTAATCAGCAAGAAGAAAGAGTTCATGATCTTGTGAAATTTAAATGCAAAGATTGTGATATGGAATTCAACCGCAAAGTCTATCTGAAAAAGCATGCTAATAGGGTTCACGGTGCTAAGAAGTTTGAATGCAAAGTTTGTGATAGAAAATTCGGCGCCAAGGATGTACTTAAAGCGCATATTAATGACGTTCATGGTCCTAAGACACTCAAATGCAAACATTGTGACAAAAAATTCAGCCGTGAAATCTTACTGAAATGCCATATTGAAAATGTTCATGATCCCAAGAAGTTTGAATGCAAAGATTGTGGTAAAAAATTTGGTTACAAAAATGTATTCAAAACGCATATTAATAACATTCATAATCCTCAGACGTTTGGATGCAAAGATTGTGATAAAAACTTCACTAGTCAGGTCTACCTGCAATATCACATTAGAAAGGTTCATGATCATGCCAATCAATTTAAATGCAAAGATTGTGATATGGAATTCAACTACAAATACTATCTGGAAAGTCATGCTATGAATGTTCATGGTCCTAAGAAGTTTGAATGCAAAGtttgtgataaaaaatttggtacTAAGGTTAAACTTGAAACacatattaataaaattcatgatCCTAAGACACTCGGATGCAAAAATTGTGATAAAAAGTTCAGCAGGAAATACTTCCTGAAATGGCATGTTAAACATGTTCATGCTCCCAAGAAGTTTGAATGCAACGATTGTGGTAGAAAATATGGCTACAAAAGTGTATTAAAAACGCATATTAATAACGTTCATGTTCCTAAGAAGTATGTATGCAaagtttgtaatgaaaaattttgcagtgCGGACTCACTGAAGCGGCATGTTAAAAATGTTCATGATCCTAAGACGTTTGAATGCAAAGATTGTGATAAAAAATTTCGCAGTGCGGACTCACTGAAACGGCATATTAAAAATATCCATTATCCTAAGACGTTTGAATGCAAAGATTGTGACAAAAAATTCAGCCGTCCAGGCCTCATGAACAGGCACTTCAAAAATGTTCATAATGATGAGAAATTTAAATGCAAAGATTGTGATGTAGGATTCACCTACAAATCCAATCTGGTAAGGCATGCTAAGAATGTTGACGGTCCTGAAAGGTTTGAGTCCAAAGATTGTGATGAGAAATTTAGCTGCGAAGAGAATCTAAAAAAGCAAAGAACCGTTCATAGTcccaaaaagtttgaattcGAAAATAGTGATGACGGCGATCGGAtgtataaattacaaaaaattttagatttctTCACTGATCATGAAAATTAG
- Protein Sequence
- MLHNNKMDEYNCNQQEERVHDLVKFKCKDCDMEFNRKVYLKKHANRVHGAKKFECKVCDRKFGAKDVLKAHINDVHGPKTLKCKHCDKKFSREILLKCHIENVHDPKKFECKDCGKKFGYKNVFKTHINNIHNPQTFGCKDCDKNFTSQVYLQYHIRKVHDHANQFKCKDCDMEFNYKYYLESHAMNVHGPKKFECKVCDKKFGTKVKLETHINKIHDPKTLGCKNCDKKFSRKYFLKWHVKHVHAPKKFECNDCGRKYGYKSVLKTHINNVHVPKKYVCKVCNEKFCSADSLKRHVKNVHDPKTFECKDCDKKFRSADSLKRHIKNIHYPKTFECKDCDKKFSRPGLMNRHFKNVHNDEKFKCKDCDVGFTYKSNLVRHAKNVDGPERFESKDCDEKFSCEENLKKQRTVHSPKKFEFENSDDGDRMYKLQKILDFFTDHEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -