Ades013173.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000009.1:5262004-5263854[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0069 0.58 11.2 3.4 1 23 17 39 17 39 0.99 2 21 0.00042 0.036 15.0 0.2 2 23 48 69 47 69 0.95 3 21 0.00033 0.028 15.3 0.0 2 23 75 96 74 96 0.96 4 21 1.1e-05 0.00097 19.9 1.9 1 23 102 124 102 124 0.98 5 21 0.021 1.8 9.7 0.1 3 23 135 155 134 155 0.95 6 21 3.6e-06 0.00031 21.5 0.1 2 23 161 182 160 182 0.96 7 21 0.0013 0.11 13.4 0.1 1 23 191 213 191 213 0.96 8 21 0.0062 0.52 11.3 0.5 1 20 218 237 218 239 0.95 9 21 0.0019 0.16 13.0 3.2 2 23 250 272 249 272 0.94 10 21 0.0068 0.57 11.2 0.4 2 23 279 301 278 301 0.94 11 21 2e-05 0.0017 19.2 2.0 1 23 307 329 307 329 0.98 12 21 6.9e-06 0.00059 20.6 2.3 1 23 335 357 335 357 0.98 13 21 0.00016 0.013 16.4 1.1 1 23 363 385 363 385 0.98 14 21 0.00087 0.073 14.0 3.1 1 23 391 414 391 414 0.95 15 21 0.0017 0.15 13.1 0.1 1 20 420 439 420 441 0.94 16 21 1.5e-05 0.0013 19.6 1.7 1 23 447 470 447 470 0.97 17 21 3.2e-06 0.00027 21.7 0.6 1 23 475 497 475 497 0.98 18 21 1.8e-05 0.0015 19.3 0.5 1 23 503 526 503 526 0.95 19 21 0.0052 0.44 11.6 0.5 1 23 532 555 532 555 0.94 20 21 0.00031 0.027 15.4 2.5 1 23 561 583 561 583 0.97 21 21 8e-05 0.0068 17.3 3.0 1 23 589 611 589 611 0.96
Sequence Information
- Coding Sequence
- ATGCGATTCCGAAAAGAATCCACTCTCGAAGCGCATTTGACCCATGAATTCAAATGTAGCCAATGCGATGAGAAATTTAGATGCAGGCCATCGCTAGGATCACATATGAAAATGCACACGAGCTTATTGAAGAGGGAGCTTGTTTGCCCCGTTTGTgatagaaaatgtaaaaattcagGAGGTCTCAGCGTCCACGTAGCCTCTCATTTTCCAGAGGAATTGCCTTGTGTCGATTGTGAGATGACATTCACAAATATAACCAGCCTTCTAGCACATATCAATGTTCATACCGATAAGGAGACGTACAAGTGTGATATTTGCCATCGAGAATTCAAAATGAGATCGCTGTTGGAGGCGCATAAGCAAGTGCACGTTCCAAGACCTGTAAAACAGAAGCCAATTTGTGCGACATGCGGGAGAAGGTTCAAAAATGTTGCTGCCCGCATAGCAcacgagaaaattcattttccggAAGAATTGCCTTGCACTGAGTGTGGAAAAACACTCAAAAATAAAGGTGCACTGAAAACACACATGGCTGTTCATTTTCGTCCGCAAGACCACAATTTCTTTGCATGCGATCAATGCGGTAAAACATTTCAGTATGAACTCGAATTGGACGAGCATGTATTAACACACGATGATAAGAGATTTTCCTGTTCCATATGCCATATTGAGTTCGGTAGAGAATGCGCTCTCAAGTCTCACATCGATGGTCAGGTTTGTAGTAAACCCGGAAATACCATCGAGTGCAATTACTGTCAAGAAACTTTCCAATTTCAATCCTCGTTGAAGGAACATTTCCTGCGATGTCATCTTAATGAAAAAACAGTTTCATGTAACGTTTGTGAAGAATTGTTTCAAAGCAAAAATGAGCTGAGGAAACATAATAAAGTTATCCACGGTAACGAGAAGCCGTTCCAATGCGTACAATGTAGAAAGACATTCGAATTTCGAAGTTATCTAAAAAGCCACATGATTGTCCACAGTAATGAAAGGCCCTTCCAGTGCAAAATATGTACAAAATCATTCAAACTGCGAACTTATTTGCAGGAACACATGACAGTTCATAGTTTTGAAAAACCATTCCAGTGCGGAGAATGCGGAGTTTTCCTGAAATctaagaaaagtttgaaaatgcaTAAGCGTATTCATACAGATGAAGAACCATTTCAGTGTGAGGAATGCAAAAGcagttttaaatttgaaagtTATCTGAAAAACCATAGATCACTCAAGCATAGTGACGAAAAGCCTTTTCAATGTACCATGTGCAAGGTATCATTCAGGGTAAAGGGTTATTTGGATAATCATCTGGCAGTTTTTGATAATAATCCATTCCAATGTGATGGATGCGACCTTACTTTCGAATCAAAATGTAGTTTGAAACAACACCAGCTCATGGCTCATGAAGGAAATCCGTACGTTTGTAAGTTATGTGGACTTACATTTAAATCAAAAGGCAGTTTTAAAATTCATCAGATTGTACATAGCACTGAGAGGCCATTCCAATGCGCCATGTgcgaaaaaactttcaaaagcaAACCTTCTTTAAGACTACACATTACGCTCGTTCATAACGACGAAAGGCCATTCCAATGTGAAACCTGTAAAGCCTCATTCAAAGCTAAAAAAGCTCTCAGTGAACATTTTATATCAGTTCATACTGTTGAAAGACCATTCCAATGTAAAATTTGCAACAATTCTTTCAAAACGGAGAAGTATCTTCGGTATCATTCGCTTATCCACAGCGATGAGAAGCCATTCAAGTGTAAGCAATGTTCGGCTTCGTTTAGATTTAAAAGTTATTTAAAGAATCATATTTACGCTCATCTCCCACGATTGCAGTGA
- Protein Sequence
- MRFRKESTLEAHLTHEFKCSQCDEKFRCRPSLGSHMKMHTSLLKRELVCPVCDRKCKNSGGLSVHVASHFPEELPCVDCEMTFTNITSLLAHINVHTDKETYKCDICHREFKMRSLLEAHKQVHVPRPVKQKPICATCGRRFKNVAARIAHEKIHFPEELPCTECGKTLKNKGALKTHMAVHFRPQDHNFFACDQCGKTFQYELELDEHVLTHDDKRFSCSICHIEFGRECALKSHIDGQVCSKPGNTIECNYCQETFQFQSSLKEHFLRCHLNEKTVSCNVCEELFQSKNELRKHNKVIHGNEKPFQCVQCRKTFEFRSYLKSHMIVHSNERPFQCKICTKSFKLRTYLQEHMTVHSFEKPFQCGECGVFLKSKKSLKMHKRIHTDEEPFQCEECKSSFKFESYLKNHRSLKHSDEKPFQCTMCKVSFRVKGYLDNHLAVFDNNPFQCDGCDLTFESKCSLKQHQLMAHEGNPYVCKLCGLTFKSKGSFKIHQIVHSTERPFQCAMCEKTFKSKPSLRLHITLVHNDERPFQCETCKASFKAKKALSEHFISVHTVERPFQCKICNNSFKTEKYLRYHSLIHSDEKPFKCKQCSASFRFKSYLKNHIYAHLPRLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -