Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_035079395.1
Location
JAVHKZ010000009.1:17434769-17437755[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.1 2.6e+03 -1.4 1.7 78 90 71 83 11 151 0.55
2 4 0.38 9.7e+03 -3.3 0.3 72 94 221 243 187 295 0.48
3 4 4.1e-95 1e-90 303.9 9.6 2 218 314 519 313 519 0.89
4 4 0.22 5.6e+03 -2.5 0.8 83 110 689 716 650 726 0.53

Sequence Information

Coding Sequence
ATGAATACCGAGATAGATAAACCGGAAGAGACACTAGCAGAACGAGAATATGATCAAAGCAGAAGTGAAGGATCCGATGACAAAAATGTGATATTGAACAACCATGATCAACTGACGCTAGAAAATTTGTCACCTGTGGAAGAAAGGGAGCAAAATGCGGAAGATTTTCATCGAAATAACGCAGAACAAGTAAATGCAAATCTGATGCCCATTCAAGAAAATGATTGCttcgaaatgaaattagaaaaagcTAATGCTGACGTTCGAGACGAAACCCAAATTCGTCGGATTAATGAAGATACGGAAGGGTCCTCAACACAAATTCATTCGGAAAATGTCACGGACTCGGCCGCGCAAGATAATCCATTCCTTGATGAAAATCGCACTTCATGTGATAAATTTCCGATCGGTGGCATTCATGGTCGAGATGAAggtgaaaaaaagttgaaatctgATTCTAAGACTCACTTCGAAAACGTTGTTCGTCGAGAATCTCTCAGTATTTTAGCGCAAAGTTACGAGGATACAGAGCCAGTCTACTTATCCGGTATTGTCGACCATATCACTAGAAGTAACGAgtacaaatttgaattcaacGCTCGTGAGGATACTGAAAACGAGCTTGTACACGATAGACAAGGCAATGAAAATCTTTCTGTGACTGATTTGATGAGTAACGAATCTATCACTGATGTATTTGACAGAGTCTACGATATGAATTCGAGGAGAGAAGACTGTTCGGATGTGAACgtcgtcgaaaattttcataatgcacTTATTAACCAAAATGATCCAGAAAACGAACTAACAAGTAGTAGTAGTGGTAGTGGTTTTTCCGAAGTAGACGGCGCGTTAAAACTTACGAATACAAAAATCAAAAGTAGTTTGAAACGACCTAACGACGATAGAATTTACGACAAAGAAAAATCCTACAAAAAAGCACGAAAAGGTATTACTTTCGACTCTGTATCTGTGTATTATTTCCCTAGAACTCAAGGATTCACTTGTATTCCTTCGCAGggaGGTTCTACTTTAGGAATGTCATGGAATCATTCGCATAGCCGTAAGTTTTCATTAGGCGAGCACGCCGCCGAGCAACGACGAGCACATAAGCAATATTGTCTACAGCAATTTAACGCTGTCAAAAATTGGAACGAATTATCAACTATGTCGAGTGATGATAGCGACAGCGATGAAATATTGTCAGACTCGGAAGTAGAAttcgaaaattacaatttcctaCAGccTATTCCTACGCGCGAAAGACGAGCTATGCTCAGAGCTGCTGGTATCCACAAGATCGACTCGGGTGAGAAGGACGAATGTCGTACTATTCGATCGTCTCGAGAGTTCTGCGGTTGTACTTGTGAGGTTTATTGTGATCCAGACCGTTGTGTTTGCGCTCAAGCTGGCATTAAATGTCAGGTTGATCGTATGAACTTCCCTTGTAGTTGCACGCGCGACGGCTGTGCCAATGAAAACGGGCGCATCGAATTTAACCCTGTTAGAGTACGGACGCATTATATTCATACTCTTATGCGTctggaaatggaaaaaaagaaagaagatctAGATGAGCAACGAAATCGAGCGTTGATGAGTAATGCGGAAAATTCATCGGAGCAGGTCTATTCTTCGTCGTCTAATATCAATAGCAATCTGATGAACTTTTCTTACCATACCAATCTGCAAACGTGGGGCAATGAATACACTAATTCGATTCCGGGTGCCACTAATTGCTTCAATTTCGGTGGCTATTCGGCGGTCACCGACCATTTCAGTATTGGTTCGATGATCGATAGTCCGTACCACCAGAACATCTCTAGGTTAGCTGCCCCCAGTGGTAGCCCACCGGCTTCAGTACAATATTGCGGTCAACTACCCGGAGAATCCGATGAATGCACGCGAATGTTACATTACAATAATATGAATTCATCGATTTTggaaatgaatcaaaattttcttattcacgATTTAACGAATAgctcaaaaagtacagagagtgAAGTCACTTATGACGTCGATCCGTTGGTGCAGTCGAGGGACAAACATTTTGAGCCACAATTAGATAATACTAGTCAAGGTGAGTCGTTAGACACATCCGCTGAAGTAAGCGAAGAAACGGAGAAAGAAGATTCTGATTCTGAAAACTTCGGtgatattattaaaaaaactATGGTCGAGTCGGTGATCGCATAG
Protein Sequence
MNTEIDKPEETLAEREYDQSRSEGSDDKNVILNNHDQLTLENLSPVEEREQNAEDFHRNNAEQVNANLMPIQENDCFEMKLEKANADVRDETQIRRINEDTEGSSTQIHSENVTDSAAQDNPFLDENRTSCDKFPIGGIHGRDEGEKKLKSDSKTHFENVVRRESLSILAQSYEDTEPVYLSGIVDHITRSNEYKFEFNAREDTENELVHDRQGNENLSVTDLMSNESITDVFDRVYDMNSRREDCSDVNVVENFHNALINQNDPENELTSSSSGSGFSEVDGALKLTNTKIKSSLKRPNDDRIYDKEKSYKKARKGITFDSVSVYYFPRTQGFTCIPSQGGSTLGMSWNHSHSRKFSLGEHAAEQRRAHKQYCLQQFNAVKNWNELSTMSSDDSDSDEILSDSEVEFENYNFLQPIPTRERRAMLRAAGIHKIDSGEKDECRTIRSSREFCGCTCEVYCDPDRCVCAQAGIKCQVDRMNFPCSCTRDGCANENGRIEFNPVRVRTHYIHTLMRLEMEKKKEDLDEQRNRALMSNAENSSEQVYSSSSNINSNLMNFSYHTNLQTWGNEYTNSIPGATNCFNFGGYSAVTDHFSIGSMIDSPYHQNISRLAAPSGSPPASVQYCGQLPGESDECTRMLHYNNMNSSILEMNQNFLIHDLTNSSKSTESEVTYDVDPLVQSRDKHFEPQLDNTSQGESLDTSAEVSEETEKEDSDSENFGDIIKKTMVESVIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-