Basic Information

Gene Symbol
CDC5L
Assembly
GCA_035079395.1
Location
JAVHKZ010000003.1:40900373-40905797[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-16 1.2e-13 51.4 1.5 2 46 9 54 8 54 0.97
2 3 2.5e-11 3e-08 34.1 0.4 1 46 60 104 60 104 0.95
3 3 3.6 4.3e+03 -1.6 0.5 3 18 430 445 429 446 0.82

Sequence Information

Coding Sequence
ATGGGGCGAATAATGATCAAGGGTGGTGTCTGGAGAAACACCGAGGATGAAATCCTCAAAGCGGCTGTGATGAAATATGGTAAAAATCAGTGGTCTCGAATCGCATCACTCCTGCACAGAAAGTCGGCTAAACAGTGTAAAGCGCGTTGGTTTGAGTGGTTGGATCCTAGCATTAAGAAAACTGAATGGAGCcgagaagaagacgaaaaattaCTTCATATGGCGAAGTTGATGCCTACTCAATGGAGAACTATTTCTCAGATAATCCGTCGAACTTCTGCCCAGTGTTTAGAACGTTACGAAACGTTATTGGACCAGGctcaaagaagagaagaaggagAAAGTGGAGATGACCCGAGGAAACTCAAACCTGGAGAAATCGATCCTAATCCCGAAACAAAACCTGCTCGTCCAGATCCCAAAGATATGGATGAAGACGAGTTGGAAATGTTATCGGAAGCTAGAGCTCGTCTTGCCAACACGCAAGGAAAAAAAGCTAAGCGGAAAGCAAGAGAGAAACAGTTGGAGGAAGCAAGACGATTAGCTGCTCTTCAGAAACGGCGAGAATTGAGAGCTGCCGGTATAGAAACGTTCAACCGCAATCGAAGAAAACGAGGCATCGATTACAACAGAGAAATACCATTTGAAAAGAAACCAGCAGCAGGATTCTATGATACTTCGGAAGAAGTGATCGATCCTTTTGCCCCGAATTTTAAACGTTTAAGACAACAAAATCTAGACGGAGAATTTCGAAGTGAAAAAGAAGAGAAAGAGCGTCAAAAAGATCgtcagaaaatgaaagaaaagaaagagaatcaaaTTCCAGCGGCCATGTTGGCAAATCAAGAGCCCGCTAAGAAAATCGGCAAATTAGTTCTTCCAGAGCCGCAGATCACGGATCAGGATTTGCATCAACAAGTTCCGCACCAAGAGGAACAACAACAACAGCTACAACAACGGGTAGAAGAAATTATTGTTGAAGCCATTGTGCCAGATCAAGCCGATCTCGATCaacggaaagaagaagaagaagctaaAAATCGTGAAATTGAATTCAAGAGACGATCTCAAGTTGTTCAACGGAATCTTCCTAGACCGATCGATATTTCCATTCCTCTAAGATCCAGTAAAGCAGATTCAAATATGACTGATTTACAAAAGGCTGAAGAGTTGATTAAAGCTGAAATGATTACCATGTTACATTACGATGCTCTGCATAATCCTGTTCCTAACGATAAATTCGCTCCAACGGATCACCAGCTGTATCTTAAACAACGTTCTTACGAGCGTTTTACAGATGAAGAAATCGAAAATGCTGAAGAACTTCTTAGTAAAGAAATGGATGTAGTCAAGCAAGGTATGAGTCATGGTGATTTACCTTTAGATGCGTACACTCAAGTATGGCAAGAATGTTATAAACAGgtTTTATATCTACCCGGACAAGGAAGGTATGTTCGTGCTAATTTAGCCTCGAAAAGAGAACGCTTAGATGCTATGGAGAAGAAATTAGAACAGAATAGAAATCATATGTCACGGGAGGCTAAAAAAGCTGCGAAGGTAGAAAAGAAGCTCAAGGTTCATTTGGGAGGTTATCAATACAAAGCCGGAGTGTTGACAAAGAAATTAAGTGAAATGCAAGATCAGGTAGAGAAAGCGGATATCGAATTATCTACGttcaaatatttacaaaaacaGGAAGAATTTGCAATACCTCGAAGAATCCAGTCGCTGGAAGATGATGTCCACCGTCAAATGGAACGTGAAGTAGAGTTACAAAAGAAATACGCCGAATTAGAACAACAATTAAACGAATTAAGTGTCGAACTATGA
Protein Sequence
MGRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHMAKLMPTQWRTISQIIRRTSAQCLERYETLLDQAQRREEGESGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIETFNRNRRKRGIDYNREIPFEKKPAAGFYDTSEEVIDPFAPNFKRLRQQNLDGEFRSEKEEKERQKDRQKMKEKKENQIPAAMLANQEPAKKIGKLVLPEPQITDQDLHQQVPHQEEQQQQLQQRVEEIIVEAIVPDQADLDQRKEEEEAKNREIEFKRRSQVVQRNLPRPIDISIPLRSSKADSNMTDLQKAEELIKAEMITMLHYDALHNPVPNDKFAPTDHQLYLKQRSYERFTDEEIENAEELLSKEMDVVKQGMSHGDLPLDAYTQVWQECYKQVLYLPGQGRYVRANLASKRERLDAMEKKLEQNRNHMSREAKKAAKVEKKLKVHLGGYQYKAGVLTKKLSEMQDQVEKADIELSTFKYLQKQEEFAIPRRIQSLEDDVHRQMEREVELQKKYAELEQQLNELSVEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00005398;
90% Identity
-
80% Identity
-