Basic Information

Gene Symbol
BAS1
Assembly
GCA_035079395.1
Location
JAVHKZ010000011.1:1348333-1350908[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 8.4e-10 1e-06 29.2 0.0 1 43 324 368 324 371 0.92
2 7 1.1e-06 0.0013 19.3 0.5 2 46 377 430 376 430 0.94
3 7 2.9e-08 3.5e-05 24.3 0.0 1 44 436 478 436 480 0.96
4 7 2.3e-16 2.8e-13 50.2 0.7 2 42 488 528 487 530 0.95
5 7 4.7e-13 5.6e-10 39.6 0.0 4 42 532 570 531 571 0.98
6 7 3.2e-09 3.8e-06 27.4 0.5 2 43 581 622 580 624 0.97
7 7 1.5e-05 0.018 15.6 0.1 3 44 636 677 634 678 0.93

Sequence Information

Coding Sequence
ATGACACTATTTTTCAAGAATGTTTTGCAATTTCTCATGGAAGCTCCTTTGGATGTGTTGAACAATACCGTGAAAGGTGAACCCGATGACGACGATATCAAATTTTTATGTTCCCTCATCAACGAACGAGAAGGAGCCTCGAGCAATGTTGGAAATCATCACTACCTGAAAGGTGAATACTCAGAAACTAAATTTCATACCCTTGAGAATCTGATTCCCGGTATCACTGACGTGGACGACTGTGTGAATTTAAAATACGAATACCAAGAAATATCGAATGATTTTGCTGAACTTCAGCCATTGAATATGAGCAACATTGTCATACCAGTCACCATCGACGCCCAAATGAACGATGCAATTTTTGCATTAGATGAAcagatcaaaaataatattactcGCTGTCACAAACTTGCTTCGCAAGCTGAGACAGTCGCGGTGGAAAAGTTAAATTTTCAACGCAAAGCAGTCGATCTAGACAAATGCATATCCTACCATGAAAGTCAAACCGTCAGAAAGCTCGAAATACGGCTCAAGAAAAAAGGGCGAAACAGATATCGATTCGGTACTCCGTATTTCAAAACGGTAGACCGTTTCCCAGCTCCCTGTAACCaagatttgaaagaaatcaTCGCTAATAACGAAATAATGTTTTTTAGATTCCCCTATCACCCAAAACTTCTACTACGCGATCAATGTAGAATCGAAACGGAAATATTGAACCAGTTGAAGAAAAAACGCGTAGAGCTTTTGAAAGCGCAGCTGAGACAAGTTTCCAAAACCAAACATGGCGATACCTGTCAACAAAAAAGTAATCTAACCAAAGCCATTGATTACGTTAAATCTGTGAAGAATATTCGGGAAACAAAGGGTTGGAATATATCCGtagattttctttcattgggAAATGAACACCGTCGATTCAACTCCGACGACTACGAGAGAATTTGGACGTTATTAGGTAGTACATTCAGAGATGAGTTTTCGACTGACGAATTAAACAATCTAAAATCGTTAGCTAGTCAGTATGGTGGTCAAGATTGGGATCGAATTGCCTCACTCTTAGGTACGGGTCGTTCAGGATATGTGTGCTTCATAAAATGGGTTCGTTTGCCCAAAGCGGAGGGCCCTCAAAGTTGGACGCCGCAGGAAAATGATCTGTTTCGAAAGTTGTGCGAGAATTTGGATAAGATAAAGGATCAAAGTGTGTTTAAGCACTACTGGCACTATATTCGTCGCCAATTTCCTACTAGGACGTATACTCATTTGCATGCTCATTGGAGATATGTGTTACGACCTTCCCTAAAAAAAGGACGATTTACCCAAGAAGAAAGTGAAGATTTGGAGCGTTTCATACGCGAAGGAAAATCGTTTCCGAGCATTGCTTCAATCATGGGGACCAGATCTTGCGTACAATTGCGATCCCATTACAATCGAATCGTTTCGCGTGTATCCTATAACCATGGAATATGgacagaggaagaagaaactAAATTGTTGGAACTTGTTGATAAGTACGGTAGAAACTGGAGAAAGATAAGTGAAGAACTCGGTACGCGCTCGCGAGGGCAATGTCGTTTAAAATTAACGTATATATGGACTAaggaagagttgaaaaaatttagcgaCCTTATCGAAAAGTACGgaccaaattttgagaaaattagcTCCGAACTTGGGACAAAATCGGTGGGACAATGTCGATCTAAGTATAGTTGTTGTTTTCCCGATAGAAATAGGACAGGTAGATGGAGTAGGGGAGAAGCCCAATTATTCGAATCGCTGTTAGCTCAATGGAAAAATGATTTCGTGCGCATTAGTCGAGGTATGCGAACAAGAGACATTGAACAATGTCGTAGAAGATACAATTGGATGCAGACAAAAAAGTCGAAAACAGGGAAGACTTCACGCTGGACGCTCCGAGAGAGGagggaatttaaaaatttggcCCAAATTCACGgcgatgatattgaaaaaatttgcgcAGCTTTGAAGAAGAAATCTCTAGGACAATGTTATAATATGTACAAGAAGATGAGTCTAGACGTAATGACAACGAAAGATGATAAGGTTCCAGTGCATAAGAGATCATCTTGTTCGAAGTCAGGGAAGGGAAAAAAGAGTCGATAG
Protein Sequence
MTLFFKNVLQFLMEAPLDVLNNTVKGEPDDDDIKFLCSLINEREGASSNVGNHHYLKGEYSETKFHTLENLIPGITDVDDCVNLKYEYQEISNDFAELQPLNMSNIVIPVTIDAQMNDAIFALDEQIKNNITRCHKLASQAETVAVEKLNFQRKAVDLDKCISYHESQTVRKLEIRLKKKGRNRYRFGTPYFKTVDRFPAPCNQDLKEIIANNEIMFFRFPYHPKLLLRDQCRIETEILNQLKKKRVELLKAQLRQVSKTKHGDTCQQKSNLTKAIDYVKSVKNIRETKGWNISVDFLSLGNEHRRFNSDDYERIWTLLGSTFRDEFSTDELNNLKSLASQYGGQDWDRIASLLGTGRSGYVCFIKWVRLPKAEGPQSWTPQENDLFRKLCENLDKIKDQSVFKHYWHYIRRQFPTRTYTHLHAHWRYVLRPSLKKGRFTQEESEDLERFIREGKSFPSIASIMGTRSCVQLRSHYNRIVSRVSYNHGIWTEEEETKLLELVDKYGRNWRKISEELGTRSRGQCRLKLTYIWTKEELKKFSDLIEKYGPNFEKISSELGTKSVGQCRSKYSCCFPDRNRTGRWSRGEAQLFESLLAQWKNDFVRISRGMRTRDIEQCRRRYNWMQTKKSKTGKTSRWTLRERREFKNLAQIHGDDIEKICAALKKKSLGQCYNMYKKMSLDVMTTKDDKVPVHKRSSCSKSGKGKKSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-