Basic Information

Gene Symbol
Snapc4_1
Assembly
GCA_035079395.1
Location
JAVHKZ010000008.1:18703459-18705948[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 6.3e-12 7.6e-09 36.0 0.3 1 44 350 395 350 396 0.94
2 7 1.4e-07 0.00016 22.2 2.2 1 43 402 453 402 456 0.95
3 7 3.3e-07 0.00039 20.9 0.0 1 44 462 504 462 506 0.96
4 7 1.7e-15 2.1e-12 47.4 0.1 2 43 514 556 513 557 0.97
5 7 4.6e-12 5.5e-09 36.5 0.0 2 44 558 600 557 602 0.96
6 7 8.7e-10 1e-06 29.2 0.2 2 43 613 654 612 657 0.95
7 7 6.3e-12 7.5e-09 36.0 0.3 3 44 699 740 697 742 0.95

Sequence Information

Coding Sequence
ATGGATTCTCCGTCGTCTGATTGTATCTGCGAAGAGAATAACGACGATGAAAATGACGCTGAATTATTGCGCCTCCTTATTAATGAACGCCGAAATGCTACCGCTAAAGAAGAACCTGGGTTAAATGAAAGCGAAGATGATATGAAAAGAGAGTACCATACTCTTGAAAATATAACTCCAATTTCCGTTGAAAGCGAAAATGTCGGAACTAGCACGCAAACTCACGCCgcctttgaaaatttaatcacGTGTGAGAATGTCGGAGAATATTTTCCTGAGTTCGAAAGTGCCGTAGCAGAGATGTTTGTAGAAGAGGAGAATATAGATCTTCAATTATCGGATATTTCTGAAGTGATGACCAGATTCACGGCTGACGGTTATAAAAATAAACGTATTTTAGAGATGAGTAAAGAAATCGAAAGTAATCTCGCAAAGTGTCGTCTTCTTACCTTGGAAGCAAAAGTTACTCTAtcgcaaaaaatgaatttacaacGTGAACTGAATACTTTGAACGAACAAATAGCGTTTTATACCTTGGAAGACGCTAAGtacagaaaaattcagaaaaagagagGTACCGAGAGTGCCAAGACAGGAACGTACCGTCGAACGTATTTCTGTCGCTTCGGTATTCCATACTTCAAGACGAAAGATCGGTTTCCAGCCGAGAAAAATGATGACTTGAAAGAGTTGTGCAGAAACAATGAGTGTATGGTCATAAGAATGCCGGCAGTTCGAAGAATTCTGCCCCATGACACGAGAACGCTCGATACCAGCATATTGAATCAGCTAAAAATGAAACGAATTAAACAACtacaatcaaaattaaaaaaattgataccagCAAAGGACGGCAACCTTGAATATGAGCAGCAAACGCAAAACTTACGTTTAGCTATTGAGAATACGAAGTCCGTAAATGATATCCGAAATACGAAAGACTGGAACATTCCGGTTGACTTCAACGCGCTTACTAAACTGAATCCACGATTTAACGTTGAAGATTACGAACGTATGTGGGAATTGTTGGGTAATCCCAACTTATCGagagaagatttttcaaaagaagaactAGATAGGTTGAAACATTTGGTgcataaatataaaaatcagGACTGGGATCGAATAGCTCAAGAGCTCGGTACAAACCGTTCTGGATTTGTTTGTTTCAATAGATGGGTAACTTCGACAAGAAAGGGAACTCGAGAACCGTGGACTAAAGAAGAAGATGACCTACTTCGTAAATTATGTAGTAAGTTGGATCATATTAAAGACTCGGCCAATTTATATCACTGGTGGCGGTATATTCGTCGTCAATTTCCTCATAGAACTTATACTCAAATACACGGTCATTGGACGTACAAATTGGCACCCTCTTTGAAGAAAGGTCGTTTTACGGAAAACGAGACGCAGAAATTAGAATATTTGATTCGCGAAGGTAAATCTTTTGGTGAGATTGCCTCGATCTTTCGTACGCGATCTAGCGTTCAGCTTCGGTCGCATTACAATCAAATTGTCGAGCGCGCGACGCATAACTCGGGTCCATGGACTGACGAAGAAGAGAGTGCTCTATTCCAACTTATCGATAAGTACGGTACGAATAATTGGGTGCAAATTAGCAAAGAGTTGGGCTCGCGAAATCGATCGCAGTGCCGATTAAAGTATCTTCAGGGCGCTTGGAATCCGGAAGAAACACAAAAGTTCCAAATTCTTATGGAGAAGTATGGGACTGACTTTGAAAGAATTAGTCAAGAATTGACAAGTAAAACAGCTGGACAGTGTCGCCTTAGATACATTCGTCAGAGAGACTCCGAACCAGAACGTCCGTTCAATGAAGGTCGCTGGACTAGAAAAGAGAATCGTCTCTTTCGAGATCTTGTCTTTAAATACGGACAGGACTATGTACTTATCAGTCAAGAATTGAAAACGAGAAATGTGGAGCAATGTCAGGAAAAATACGAGAGAATGATTTATCGAAAGGCGGTTCCTCCAATTAAGAAGATTGAAGTTAAAATCCTTGATGGCAAACAagaggataaaattttgaatatataCCCAGCTGAGACGAATTTGATTGCGAAAAGTAGATCTTCACGCTGGACTATGcgcgagaaaaagaaattcagagagTTACTTCATGAGTACGGTTGTCAGTTTAACAAGATCAGCGACGAATTAGGTTCAAAGTCGATTCAGCAGTGTCGGAATTTGTACAAGAAAATGAACGATGGAAGTCAAGAGTGCTTCATGACTGATGAAGACGTAGGAAAGGACAATTTATGCCCTCCTCCAATCAAACAGAGGAGACCATCGTCTCCTATGATACAGCTTGTGAATGTTGTGGAAAATGAGTTAATTGAATCAGTCCCAATGGCTGACGTACCGGACGAGATCGAGATACTGGATGAACGACGTATCTCGATACAAAAACGAACAAGTTTGGAAATCGACCCCTTACAAGTGGATTTTTTCCACGATCACGATGAATAA
Protein Sequence
MDSPSSDCICEENNDDENDAELLRLLINERRNATAKEEPGLNESEDDMKREYHTLENITPISVESENVGTSTQTHAAFENLITCENVGEYFPEFESAVAEMFVEEENIDLQLSDISEVMTRFTADGYKNKRILEMSKEIESNLAKCRLLTLEAKVTLSQKMNLQRELNTLNEQIAFYTLEDAKYRKIQKKRGTESAKTGTYRRTYFCRFGIPYFKTKDRFPAEKNDDLKELCRNNECMVIRMPAVRRILPHDTRTLDTSILNQLKMKRIKQLQSKLKKLIPAKDGNLEYEQQTQNLRLAIENTKSVNDIRNTKDWNIPVDFNALTKLNPRFNVEDYERMWELLGNPNLSREDFSKEELDRLKHLVHKYKNQDWDRIAQELGTNRSGFVCFNRWVTSTRKGTREPWTKEEDDLLRKLCSKLDHIKDSANLYHWWRYIRRQFPHRTYTQIHGHWTYKLAPSLKKGRFTENETQKLEYLIREGKSFGEIASIFRTRSSVQLRSHYNQIVERATHNSGPWTDEEESALFQLIDKYGTNNWVQISKELGSRNRSQCRLKYLQGAWNPEETQKFQILMEKYGTDFERISQELTSKTAGQCRLRYIRQRDSEPERPFNEGRWTRKENRLFRDLVFKYGQDYVLISQELKTRNVEQCQEKYERMIYRKAVPPIKKIEVKILDGKQEDKILNIYPAETNLIAKSRSSRWTMREKKKFRELLHEYGCQFNKISDELGSKSIQQCRNLYKKMNDGSQECFMTDEDVGKDNLCPPPIKQRRPSSPMIQLVNVVENELIESVPMADVPDEIEILDERRISIQKRTSLEIDPLQVDFFHDHDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-