Basic Information

Gene Symbol
Dnttip1
Assembly
GCA_035079395.1
Location
JAVHKZ010000018.1:34076818-34085386[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-07 0.00012 22.1 0.0 1 38 420 456 420 461 0.95

Sequence Information

Coding Sequence
ATGGTGGTGAATAAATTGCAAAGAGGCGTTTCGTGGGATTCTTACACACGTTCGATCAATTCGAACCATGACAGCGCGACTATGGATTGGTCTTTCGAAGACAGATTGAATGGAAACGATGCAGTTCCGATCACTGAAAGGCTCGTGGAGTGGAAAAACACGTTCAATATGCGTCAAGTAACGTTGGAAAATATCGCAGAAGGTGTTAGCGAAAATACCGCCGGGAATAAGATCGCGATCAAGGCTACGAAGATGCACGGTCGTAACGTCGTGAACGCTGCTAAATCTTTAGATCTGCTTCGACAAAACATACAGTctgctataaataatgaaatcgATCTGGTGATCAAAAAATACTTGGACATGTATTTCGTTCCCGCTATCAACAATATAAAGCTGAATCTCGGTCACGGTAGTGTAAATGAGGAGCACGTACGCGAGGTATGTCGGACAATGTTGGATGAGGCTAAACATCTTTACTTGAACTCACCTTTATCTCGAAGTGATTCGCCTTTCAACGCTCCCACGGATACAGACACTCTAATCGATTCCCGGTTTGGCAACAGTCAAGACGATGTCGACGAAGATAAGCGTATTTGCATGTTCATGAGGCCCCGTGATTCCGGAGATCTCACACCTGTATCACCGCTCATGTCAAACCGACAAAAGTCAATTGTTACCGTTACTTCATCGATATCGAAAAACGACCCGTGCAGAATTACCTCGAGAACACTATTCATTCCATCTTCACGAGTTACCAAGGTATTAGGTTGCGGTGGTATGAGAGGGCGACTCTTCCTAAAGCATCCAGATCTTTTTCGTTATTGCGTGGATGCCGAAGATCGCGAATGGCTAATCAAACACAAGCTGCCCTACGTCACGCAGCAAAATGCAAACCCTTCGTATTTGATGATTTTGGACGACGTGTTAGAATTACTTAATTTAGAGTGTTATCGGAACAACGCGAGTGTTATGAGAGCCGAACTGAAAGGTTTCGAAGTACCAGAATTTATGCGGAAGAAAATGAGAACAGCGATCACTACGGGGAAAGCTTTTGTTAACATCATGCAATCAACACCTGAAACCTCAACCAATGGATCCACCGGTACGAGTGTTACCTGTGTAACTACGGACGTACATTCGCACTCAACGCCGGAACACGTCACGATAGAAACTAATTCGATAAACAGCGTCATTCAGGCCACCAACGTCCTTATACAAGtgaaagagaagaaaaaagtacctaagaGTAACTGGACGGAGGATGCGATGCAGAAGGCACTTAGACTGATATCGAGAGGCCGGTCTCAACGTTACGTGGAACGTAAATTTGGTATACCACGACGTACGTTAAGGAATCGTTTGAAGATAGCAGCAATCAGCCGTAAAACTAATTCAATATCATAA
Protein Sequence
MVVNKLQRGVSWDSYTRSINSNHDSATMDWSFEDRLNGNDAVPITERLVEWKNTFNMRQVTLENIAEGVSENTAGNKIAIKATKMHGRNVVNAAKSLDLLRQNIQSAINNEIDLVIKKYLDMYFVPAINNIKLNLGHGSVNEEHVREVCRTMLDEAKHLYLNSPLSRSDSPFNAPTDTDTLIDSRFGNSQDDVDEDKRICMFMRPRDSGDLTPVSPLMSNRQKSIVTVTSSISKNDPCRITSRTLFIPSSRVTKVLGCGGMRGRLFLKHPDLFRYCVDAEDREWLIKHKLPYVTQQNANPSYLMILDDVLELLNLECYRNNASVMRAELKGFEVPEFMRKKMRTAITTGKAFVNIMQSTPETSTNGSTGTSVTCVTTDVHSHSTPEHVTIETNSINSVIQATNVLIQVKEKKKVPKSNWTEDAMQKALRLISRGRSQRYVERKFGIPRRTLRNRLKIAAISRKTNSIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-