Basic Information

Gene Symbol
lov
Assembly
GCA_035079395.1
Location
JAVHKZ010000007.1:13177647-13197300[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.7e-14 5.1e-11 42.6 0.0 1 44 422 465 422 466 0.94

Sequence Information

Coding Sequence
ATGGGATCGGCGAAATACAGTTTACGATGGAATAATCATCAGACGCATTTGCTGAACGCTTTCGAAGGCCTACTACACAATGAAACTTTAGTCGACGTCACGTTGGTATGTCAAGAAACCAAATTCAAAGCACACAAAGTCGTACTCTCCGCATGCAGTCCATACTTCCAAAGGATATTCTGCGAAACTCCATGTAAACATCCTGTGATAGTACTTAATGATCTCAAAGCGTGGGAAATACAAGCGATCGTTGATTTCATGTACAAGGGCGAAATTAGCGTCGAACACGAGCAACTCGCGTCCCTTATGAGCGCCGCCGAATCATTACAAGTTAGAGGATTGGCGCAAACCGAACAAATACCTATGTGCAATATCGACAGTACTCCTAATAAAGACGAGAGCAACTCGAGTAATAATAGTAACGCGTCTGTGAAAACAAATAGTAACCATCCAGCGAGAAGATCGACACCTTGTTATCCTCTGTCCCCACCGAGTGACATCTATCAGAATCATAATTCGCACCATTTAAATTCGCCGCCGACGATGTTATCGGGTTACGATTCTCATGTTAGATTACCTCAATTACCACTTATGCCGAATATTTCGTTTAACAACAGCGATTCGCAAAGCGATCGCAATTGTCAGTCGCCGTTGCAAAGACGAAAACAGGCGCGACCTCGGAGAAGATCCGGCGAATCGATCGGACCGCAAGACTTGAGTAAAGGCTGCTCTCAACAACAAAGCGATTCAGAAATGGCTGAAAATCTGTCGttgaaaaaatctccaagcAGGTCAAACAATCGTAGCGTTACTCCGACCAGACCAGCGTCTAGAGGGCAAACATCTCCTAATCAAAATTCGTTGAAAGGAGAAAGCGAAGAATCTGATATTGGTGATTCTACGACGCAGAGTCATCCGATAGAGTTGACGACGACTCCTGTCATGGTAGATTCTAGACACGAAATGATGATGCGCTTTGATAGTTTAACGTTGGATCATTCGGCAGCGCTAATGCACCATCGAGCTGCTCAAGACCATTTGGGCCCAGAGAATTCAACCAGTCATTTACCGTCTCTATCAGGTCTTCCTCTTACTCCTCCACATAATTTATTTCCGACGGCATTGGACGCTAATCGAGGCTATCTTCTAAACGATATTCTAGATGTGAAACACGATAGTCAGCTAAGTTTACCtcataaaaagaaaaTGTGCCGGCCGAAAGGACAGCATAGTGCGCCTCGAGGCGGACCTCCGCGTTCGTGGACGAACGCCGACTTGCGAGACGCCCTCCTTCAAGTATGGACCAAAAAAATGACCACCTCGCAAGCGTCACGCATGTACGGTATACCGTACAACAGTCTATTGATGTACGTTCGCGGTAAATACGGTAAATcgttaaaattagaaaaactaaAACACGACTGCTTCGGAAGCGAGAATATCGGCTCGCTAGATCTGCTCTCCATCAACTCGATTAGCAATCACAACAATAACAACAATCATAGCAgcaacaataataacaactcGAGTAAGGCGCTCAAGCTACCCGAACCCGATCTCATGCTCGGCCCGCCGGGCTTCAATCAGACGCCGTATCCGTCACCCAATTTCTACCCAGATTTCGGCGCCTCGTATCCCCTACCAATGGGGCTGATGCATTTACTGCCGCAATCCGACCGTATCAGAGACTCGTTTCACGACCGTGAAATGTCCGCTCTGTCCATGCACGTGGGCTACCACGGTAATAGAGGTGAGCACCAAGAGACGAATAACCAGCGTAGCAGTTCGGCCCCTATTGATTACAATAAGAACGAGAGAGACCTATGCGATAGCAGTCCGTTGGACTTTGCTAAGGATCTGTCCTCGCCGTTTCAGTCTACCAATATGAAGATGGAGGACGATTCGGTGAATAGTCCGCAATCGGATAAGGAGGACGTACCGGTACCGTTGCAGAGGGTATCTTTAGAGCAGAACGCTCAAGACTGA
Protein Sequence
MGSAKYSLRWNNHQTHLLNAFEGLLHNETLVDVTLVCQETKFKAHKVVLSACSPYFQRIFCETPCKHPVIVLNDLKAWEIQAIVDFMYKGEISVEHEQLASLMSAAESLQVRGLAQTEQIPMCNIDSTPNKDESNSSNNSNASVKTNSNHPARRSTPCYPLSPPSDIYQNHNSHHLNSPPTMLSGYDSHVRLPQLPLMPNISFNNSDSQSDRNCQSPLQRRKQARPRRRSGESIGPQDLSKGCSQQQSDSEMAENLSLKKSPSRSNNRSVTPTRPASRGQTSPNQNSLKGESEESDIGDSTTQSHPIELTTTPVMVDSRHEMMMRFDSLTLDHSAALMHHRAAQDHLGPENSTSHLPSLSGLPLTPPHNLFPTALDANRGYLLNDILDVKHDSQLSLPHKKKMCRPKGQHSAPRGGPPRSWTNADLRDALLQVWTKKMTTSQASRMYGIPYNSLLMYVRGKYGKSLKLEKLKHDCFGSENIGSLDLLSINSISNHNNNNNHSSNNNNNSSKALKLPEPDLMLGPPGFNQTPYPSPNFYPDFGASYPLPMGLMHLLPQSDRIRDSFHDREMSALSMHVGYHGNRGEHQETNNQRSSSAPIDYNKNERDLCDSSPLDFAKDLSSPFQSTNMKMEDDSVNSPQSDKEDVPVPLQRVSLEQNAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00170921;
90% Identity
iTF_00170921;
80% Identity
iTF_00170921;