Basic Information

Gene Symbol
ONECUT1
Assembly
GCA_035079395.1
Location
JAVHKZ010000002.1:12748268-12772669[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4 2.7e+03 -1.1 0.1 20 32 388 400 383 405 0.80
2 2 4.1e-37 8e-34 116.0 0.6 2 78 525 601 524 602 0.97

Sequence Information

Coding Sequence
ATGGGCGAAGGTCATCAACTTCATGGAGATAGTACAGCTGCCACAATTACGCCAATTCGTGGTGGCACGAGCGCTTTAGCCGCGTTAGCGGCACGAGCTCATGTCGAACTGGCCAATCTTCAACGCGAGGAACTCTCGAGACCGGCTGTTCTCATACCAGCACCCTCTTCCAATACACGTAATGGAAATGAGACGCGAGTCATCGAAGAGGTTCCCGTGACCGctattaaaattgattatacCAACATAAAAGCTAACTTTtgcaacaaaagaaaaaagttttccgtCATAGTTAACCATCCGGACGACTCGCGTGATTCGGATGAAATTTGTTCGGACAAGTTGTCCAATAACTCCGGTAGCTCGGGCTCGATGGAGTGTTCGACGACCGACTACCGAGGTAATTATAACCAAAACCAGAGTTCCTCGTATCCGCATATTTCCAATCTGAATGGTCGAGTGTCGCCACAAAGGTATAGTCCGAATTCTTCGTATGCGACTCTGACCCCGTTACAACCTTTACCACCGATTTCTACTGTATCTGATAAATTTGCTTATGGCCATTCAAGTAATGTTACCGGATCGTTCAATGTTATGCAACATAACATAGCAATAGGCATGCATTCGCCGTACGGTTATGACAAAATCATGTCGCCTCCTCACCCGTATTCGTCGAATATGGTTATGCAACAAAATTCGCCAGACTCGCCTCAAAGTGGGTACAGTCAAAATGGACTCAGTTCACCTCCGAGAAGTGGCACTCCGAACAGTTGCTACGATTCACCTTATACCCAGGATATTGTACGAGATCAAGTTACATCTTCGAGAAGTCCAAATGCGAGTCCTCGTTCCGCGTCGCTAGGTTCTCCTCCACCACCACACATCGTGGGCCCAAATTATTCTAGTCCAAATACACCGTCCATGATACCTTCTATCAATGGTTTGATTACCGCAGCACATGTTATTGCGTCCAATTCTGGACGTTGTTCTCCCTTATCACCTCCACTTGTTCATCCGAGACAACCATCGTTGATCCAGTCTCTAGCTATGGGCTCACCACCTATGCAGCAACCGCCTCCTATATCCCCTCCGACTGAGCCTCCGCAACCTCAATCGTTACCTCAACATTTACAGCCTCTGACGCCAACGAATTTAACGCACCATCAGCAGATACAGCAAGCAATTCTAGCCCAGCATATAGAAAACGAAGTTGTTGTCGTGTCTTCACCCTCGCCTCCGAAACATATCCAGCATCAACAATCATTACAGCAGCATCAAGCTAACCAAGCAGCTCAACAGAAtcagcaacaacagcagcagcagcgaTCTCAATCGCAAGAATCGCAGCAATCCTTACCATTACACCAACCTATCTCTATTCAAACGTGTATTCAAACCCAACAAACACAAGTGAGGCCACCTTCTCAGCAACAGCAACAACCTCATCAACAACAACCAACTGTGACTGCTGTGCAACAAAACCAGCAACAACCGCAATCGCAGCAAATGTCTGTAGTAAAAGTGCTTCCTCAAAGTAGTGTGACGTCACCCATGAGTACGGGTACAACCGACATGGAAGAGATCAACACGAAAGAACTCGCTCAGAGGATAAGCGCCGAACTGAAACGATATAGTATACCGCAAGCAATTTTCGCTCAAAGGGTGCTGTGCCGATCACAAGGTACTTTATCGGATCTCTTGCGCAACCCTAAACCTTGGTCCAAACTAAAATCTGGAAGAGAGACGTTCCGGAGGATGTGGAAGTGGCTGCAGGAGCCCGAATTCCAGCGTATGTCTGCTTTAAGATTGGCAGCGCCGTGTAAACGTAAAGAAGAGGGGCAGACACCACCAAGCAACACGAACAGCAATTCCACGACGCCGAAAAAACCTCGTCTCGTGTTTACCGACTTACAGAGACGTACTCTGCAAGCTATATTTAAGGAAACGAAGAGGCCGTCAAAGGAAATGCAAGTAACGATAGCTCGTCAGCTGGGACTCGAACCGACCACGGTCGGAAATTTCTTCATGAACGCTAGAAGACGCTCAATGGATAAGTGGAAAGAAGATGAACCTCCGAAAAGTGCGTCGCCCGTTCAGCAAGACTTTCAAGGCGAACCGATTCCTTCAGTCAATATAATTACCCAGCAGCCTGATAATATTTTATAA
Protein Sequence
MGEGHQLHGDSTAATITPIRGGTSALAALAARAHVELANLQREELSRPAVLIPAPSSNTRNGNETRVIEEVPVTAIKIDYTNIKANFCNKRKKFSVIVNHPDDSRDSDEICSDKLSNNSGSSGSMECSTTDYRGNYNQNQSSSYPHISNLNGRVSPQRYSPNSSYATLTPLQPLPPISTVSDKFAYGHSSNVTGSFNVMQHNIAIGMHSPYGYDKIMSPPHPYSSNMVMQQNSPDSPQSGYSQNGLSSPPRSGTPNSCYDSPYTQDIVRDQVTSSRSPNASPRSASLGSPPPPHIVGPNYSSPNTPSMIPSINGLITAAHVIASNSGRCSPLSPPLVHPRQPSLIQSLAMGSPPMQQPPPISPPTEPPQPQSLPQHLQPLTPTNLTHHQQIQQAILAQHIENEVVVVSSPSPPKHIQHQQSLQQHQANQAAQQNQQQQQQQRSQSQESQQSLPLHQPISIQTCIQTQQTQVRPPSQQQQQPHQQQPTVTAVQQNQQQPQSQQMSVVKVLPQSSVTSPMSTGTTDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAAPCKRKEEGQTPPSNTNSNSTTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKEDEPPKSASPVQQDFQGEPIPSVNIITQQPDNIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00005194;
90% Identity
iTF_00170568;
80% Identity
iTF_00170568;