Basic Information

Gene Symbol
kn
Assembly
GCA_035079395.1
Location
JAVHKZ010000010.1:4585953-4594442[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-101 2.2e-97 327.3 0.0 209 388 10 196 7 203 0.98
2 2 2.1e-06 0.027 13.3 22.2 407 537 194 326 192 353 0.56

Sequence Information

Coding Sequence
ATGGAGTACACATACGCAGGTGCTGTTAACGTTTGGATTTCAACGCAAGTGAATGTAGAGATGGCCTCTTTAGCTGTCTCCGAGAATATGTTCGTGCACAACAATTCTAAGCACGGACGCCGAGCAAAACGACTTGATCCTCCTGATGGATTATACCCACCGTTACCACTAGCCTCGCCTTGCATCAAAACAATCAGTCCTAGCGAAGGCTGGACAACTGGTGGATCAACCGTGATTGTCATCGGAGATAACTTTTTCGAGGGATTACATGTGAATTTCGGTCCGAATCTTGTCTGGAGCGAAATACTAACCCCGCACGCCATACGAGTTCAGATACCACCTCGTCATTCAGCAGGCGTAGTAGAAGTGACCTTGTCGTTTAAAGGAAAAACATTCTGTAAAGGGAATCCGGGTCGCTTTGTTTACGTTTCTCTACAAGAGCCGACGTTAGATTACGGATTTCAGAGATTGCAGAAACTTATACCAAGACATCCCGGAGACCCGGATAAATTACCAAAGGAAATCATACTGAAACGAGCCGCCGACCTAGCCGAACTTTTTTATCAAGTGCCATCGCGGAATCAACTTGCCTTAGCCACAGCACGATCACCAACCAACAACGGCGGTATGTCTGGCGGATTCAATTCTTACCCTGGACAATTGGCGGTTTCCGTTCAAGAAAATGGCAATAGTCAGTGGGCTGAAGAGGAATTTTCTAGAGGGCAGAGTAGCAGCGTTTCACCGCGAGGTGGTTACGGCTCGAGTGCATCAACTCCACACTCCTCCAACGGAGGAGGCTCTTATAATAGTGGCAATACGAACAACGGAGGCGGAAGTGGCGGAGTGACAACAAGCTCAGCGTATCCCAGTTCAACTAACGCTAATGCCAACTCCAATTTAGGATCGCCGACTAGTGGTTCTCTTCTGTTTAATTCATCGTCGAGAGCTGGAACTAGCGGTAGTATCATATCGTCTCCCTTCGCAACCATGAATCCGTTCGGACTCAAGGCGACAGAAGAAACAGTGACGAGTGAGGACGAGTCATTCACGTGCGCTTCGCCCATCCTCATACGCTTACCACCAGAACAGACGCGCATATTTGATATTTCACTACACATATTACTTATAGAAACTCCGAGAGGACAAGTTGGTAAATGGTCAGTAATGAAGAACACCCAGCCAACTCGCGTCAGAAAACCGATGTAA
Protein Sequence
MEYTYAGAVNVWISTQVNVEMASLAVSENMFVHNNSKHGRRAKRLDPPDGLYPPLPLASPCIKTISPSEGWTTGGSTVIVIGDNFFEGLHVNFGPNLVWSEILTPHAIRVQIPPRHSAGVVEVTLSFKGKTFCKGNPGRFVYVSLQEPTLDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAELFYQVPSRNQLALATARSPTNNGGMSGGFNSYPGQLAVSVQENGNSQWAEEEFSRGQSSSVSPRGGYGSSASTPHSSNGGGSYNSGNTNNGGGSGGVTTSSAYPSSTNANANSNLGSPTSGSLLFNSSSRAGTSGSIISSPFATMNPFGLKATEETVTSEDESFTCASPILIRLPPEQTRIFDISLHILLIETPRGQVGKWSVMKNTQPTRVRKPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-