Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035079395.1
Location
JAVHKZ010000018.1:3715475-3720112[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-22 3.3e-19 69.5 0.1 3 89 98 180 96 180 0.94
2 2 1.6 4.9e+03 -1.5 0.0 6 48 188 229 183 235 0.71

Sequence Information

Coding Sequence
ATGGGTCCTTCAAATCACCATTCTTTTATTGACCCTGCAACCTATACTCAGAATGGTGAGTTTGTTTTTAAGATACCACCAGAAGCTCCAGTTTTTGAACCAACAGTTGAGGAATTCTTGGATCCACTGGCCTACATAAACAAAATTCGCCCAGTTGCAGAACGAACAGGTATTTGTAAAGTAAAACCTCCTCCTGAATGGCATCCCCCGTTTGCAGTTGATGTCGACCATTTCAAGTTCACACCCCgcatacaaaaattgaatgaattggATGCAAATACGCGTGTGAAACTTTACTTCTTGGACAGATTAGCCACATATTGGAATTATAGTGGGGTTCAAATCCGAATACCAGCTATTGAAGATAAAACAGTTGATATGTACTCCTTGTATAAGTTGGTTGAATTAGAGGGTGGATTTGATAAGATTAGTGCTGAAAGGAAATGGCCTAAAATAGCCGCACGAATGGGGTATGTTAATGAAAAGACAGTTGCACCTCTTTTGAGGCAACATTATAAACGTTTGTTGATGccttatgaaaaatttgaaaagtcgaaaattctaGAGCAGCAGCAAAAATCTAATGAGAGTAATGACGATAAAATATGTGCAGAAAAATCTAACATCTCTGGTAAAAATGTAGACATTACTTCCATCAAAAAAGAATTGGAAGGTGGGATGGAAACTAATGGAAAACAAAGGATTAATGGTGGTAGACGTTGTACCCGCTCAAACTGCAATGACAGTGTTACTGAAATTTTAGTCAGTGACACATTTAAGAACCCTACCATGGCtgataaaaataaagaactTCAGCGGCTCACATTTTATGGACCTGGCCCAAAGATTTTGGGCTTGAATAAATCTAAAGTCAATATAagcatgaagaaaaattcaacttctgatGCTAGTTTTGACCTTTTGGCTGACTCAGCATGTATGGTTTGCAACAGTGGTGAttcggaagaaaatattttgttatgTGATGGATGTGATGATGGTTACCATACATTTTGTTTGGTGCCTGCGTTAAACTCAGTACCAAAAGGTGAATGGCGTTGTCCTAAGTGCATTGCAGATGTAGTCAGTAAGGCAAATGATACAACTTTTGGATTTGAACAAGCAGAGCGAGAATACTCATTGCAACAATTCGGTGAAATGGCTGACCAATTTAAATCAAATTACTTCAATATGCCTGTCCATATGGTTCCTACAGAACAAGTTGAACaagaatattggaaaattttgtcatcAATGGATTCAAGTGTGACTGTTGAATATGGTGCTGATTTACACAGTATGGATCATGGATCAGGTTTCCCAACACAGATGGCATTAAAACagtcagaaaatgaaaatcattattACAAATCATATGTTGAATCTAATTGGAACTTAAATAATATACCGGTACTTGAAGGCTCAGTTCTGGGCTATATAAATGCTGATATTTCGGGTATGAAAGTACCTTGGATGTACGTTGGTATgtgtttttcaacattttgttgGCATAATGAAGACCATTGGAGTTATTCCATAAATTATCTCCATTGGGGAGAGCCAAAAACTTGGTATGGTGTTCCTGGTTTTAtggctgaaaaatttgaacaagttATGCGAGAAACAACTCCAGATCTTTTTCGTAATCAACCAGACCTCCTGCACCAGCTGGTTACAATTTTAAATCCTAATATATTGATGGATCAAGGTATTCCAGTGTACCACATAGATCAAGCTGCTGGTGAATTTGTGCTGACCTTCCCACGTGCTTATCATGCTGGTTTCAATCATGGTTACAATTTTGCCGAAGCTGTAAATTTTGCACCAGTTGACTGGATACCATTGGGGCGTGAATGTGTTGAACATTATTCCAACTTACATCGTTATTGCGTTTTCTCTCATGATGAACTCATTTGTAAAATGGCCTCAGTTCCAGAAAACTTGAATTCAAGATTAGCATCTGCTACGCATCAGGATATGTTGGAAATGTTAGATATTGAAAATAAGCAGCGAAAAGCCCTGCTTGAATGGGGTGTGGTAAATGCCGAGCGTGAAGCATTCGAATTGCTGGCTGACGATGAGCGGAAGTGTTCTGAATGTAATACAACATGCTTCTTATCGGCTGTGACATGTAAATGTAGCTCCAAGAAATTAACTTGTTTACGACATTTTAAAAATCATTGTATGTGTGCAGCAATTGAACATACACTCCGATACAGATATACACTTGATGAACTACCAGTCATGTTGGAAAAATTAAAGGAGAAAGCAGACTCTGTAGCAGTTTGGGCGTCTAAAGTTCATGATGCTTTAGATATTAACACACCTCGTACAATCACATTATCAGGTCTAAAAGAATTACTGAATGAAGCTTGTGAGAAACATTTTCCTGATGACCCATCACTAAAATTACTATCAAAAGCAATTAAATCTGTGCAAGATGCTTTAGCTGTTGATTTCAAGAACATTCTATCTCATAAGCAGACTCTCAGTAAAAAAGTTACCCTCATGGAAATACAGAGTTATTATGAAGAATTACAGCGTATTCCATGCACACTCCCTCAAGAAAACACAGTAAAGCACTTCCTAAAATTCTTAGAAGAGTTGGAAGAAGCTGTTGAAAAACTGATGCTAAACAATTCTCCTAGTCTTGAAGAAGTTGATACCCTTTTGAAGAGAGGTCAATTTCCAAATGTTGAAATACCTTGTTTAACTAAATTGGAAGAACTTCGAAATGTCGTTGAAATTATTGAGGatcataaaaaaatgaaaaaaatgtccaAACCTCATTCAAATTTAGTTGATCAGTTACTCAATCGCTGTGCAGCCATCAAACATCCAACCAATGCTATCAACTCCATTGTAAAAGAGTTGACAACTCTCTCAGAGAGTGTGAATTTATGGGAGAAGAAAGCCAAAATATTTTCCGATAGAACCATTTGTAGCAATGATTCTAAACCAACATTAGGTCAAATTGAGGAGTTGATTCAAGAATTGGAAAACTTGGATGTAGTACCGCCAAGCTCTGAAAGTTTGGTCAGTGTCCtgcaaaaagttttgaaatggcGTGAACAAATTCATAATCTCCTCACTCAGAcagaaatattcccattctgcGAACAATTTGAACGTGCTCTGGATGAAGTGAGAAGTTTAAGAATTGATTTAGAGGAGATAACTCAATTGAAAACAGTCATTACCGAAGTTGTCAGATGGAAAGAAGAAGTGCACGACCTATTCCTTGGTGATTGTCGCGTATTTGGTCTTTTAGAGGTGCTCACTCCACGCCGAAATTTGCCGCCAAAATGCAAGTACAATACCATAGGTGTTGTATCTGCACCTGGGTCTGATTCCTATGATTTTCTCAGTGCTGATAGTAATGTGAAAGATGATATTGATGTTGAAAAGATTAAAGCTTCACTCCAGGTAGCTGAAAAACGTGAATTTGAGTTACTCCGAGCGCTGCGGGTCAAAAATACTTACAAAAGGAAACAGCCTGATGCTACTTTCTGTCTATGTAATGACTCATCAACATTCTCAATGAAGGAGTGTATTTTGTGTAAAGAACTTTTCCACATCCAGTGTTTGAAACAGTTGCCCAATTTATGGAACAATCTTGAAGAAAATGTGGTATTCTTGTGCCCGTTTTGTCAACGCACTAAACGACCAGAAGCAAAAGCAGTAACAATAAGTCTGAAGAAGTTAGAACAATTGCGTGTACAAACACTTGAAAGTGTTTCTATGCAATGTCTCCTTGACCGAGAAGTTAAATGGAAGGAGTTGGTTGATGATCTCCTTAAAACACCAGAAATGTTGACAATTTCCCGAGCTGCCACTGACCCTAAGCCAAGAAATACTAGAAGTGCTCACCTCACGTTGAGTAATGAAAACAAAGGTATTTTAGAGACATTGTTATTCCGAGGTTTTTTGCTTGAGCTTGACGTACCTGAAAATAAACTCATTTACAAGATATTGCACAAATTGGACAGAGAGCCAATCAATaaagtttcaacttttgatGAGTCTACTATTAATATAGAATTAATCAATGAAACGTGTTGGCTGGAGAATGAATTATCTTCATCTTGCTTAATGTCTTCAGCAAAAGAGAAGAATAATGAATTTCCCTTGtatatgaagaatattgggtATGATAAGAGTCATACAGATGATTATCAACTTTTCActttgggaaaaaagaaaatatcttcaGTGACTACAATGTGCAGAAGGAAACGAAAGATGCCTAAAACAGAAGACGATCTAGATCAaccagaaaattctaaaatgaaTGAGCTTCTTCATAATATTGAAACAAGAAAGAATAAACAGAAGAATATTATGAATGTAGAGgatgaagaagagaatgaaTGCGAAGCAAAAGAATGTCTAAGACCTACTGGTGAGCATGTTGATTGGGTTCAATGTGATTTCTGTAAAAACTGGTTGCATATGATATGTATTGGGGTAACCAAGGGTGAGGTTGATGATCAAACTGAATTCATGTGTAGCCTATGTAAAAAAGTTGATGGTGGAAACTCAACAGATGACAAAAATCGAGAAGATGATGACGAcgacaatgatgatgatgatcgaTTACTCTTGATGGAGTATACAAATCGAAATTCTCCCATCTAA
Protein Sequence
MGPSNHHSFIDPATYTQNGEFVFKIPPEAPVFEPTVEEFLDPLAYINKIRPVAERTGICKVKPPPEWHPPFAVDVDHFKFTPRIQKLNELDANTRVKLYFLDRLATYWNYSGVQIRIPAIEDKTVDMYSLYKLVELEGGFDKISAERKWPKIAARMGYVNEKTVAPLLRQHYKRLLMPYEKFEKSKILEQQQKSNESNDDKICAEKSNISGKNVDITSIKKELEGGMETNGKQRINGGRRCTRSNCNDSVTEILVSDTFKNPTMADKNKELQRLTFYGPGPKILGLNKSKVNISMKKNSTSDASFDLLADSACMVCNSGDSEENILLCDGCDDGYHTFCLVPALNSVPKGEWRCPKCIADVVSKANDTTFGFEQAEREYSLQQFGEMADQFKSNYFNMPVHMVPTEQVEQEYWKILSSMDSSVTVEYGADLHSMDHGSGFPTQMALKQSENENHYYKSYVESNWNLNNIPVLEGSVLGYINADISGMKVPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGFMAEKFEQVMRETTPDLFRNQPDLLHQLVTILNPNILMDQGIPVYHIDQAAGEFVLTFPRAYHAGFNHGYNFAEAVNFAPVDWIPLGRECVEHYSNLHRYCVFSHDELICKMASVPENLNSRLASATHQDMLEMLDIENKQRKALLEWGVVNAEREAFELLADDERKCSECNTTCFLSAVTCKCSSKKLTCLRHFKNHCMCAAIEHTLRYRYTLDELPVMLEKLKEKADSVAVWASKVHDALDINTPRTITLSGLKELLNEACEKHFPDDPSLKLLSKAIKSVQDALAVDFKNILSHKQTLSKKVTLMEIQSYYEELQRIPCTLPQENTVKHFLKFLEELEEAVEKLMLNNSPSLEEVDTLLKRGQFPNVEIPCLTKLEELRNVVEIIEDHKKMKKMSKPHSNLVDQLLNRCAAIKHPTNAINSIVKELTTLSESVNLWEKKAKIFSDRTICSNDSKPTLGQIEELIQELENLDVVPPSSESLVSVLQKVLKWREQIHNLLTQTEIFPFCEQFERALDEVRSLRIDLEEITQLKTVITEVVRWKEEVHDLFLGDCRVFGLLEVLTPRRNLPPKCKYNTIGVVSAPGSDSYDFLSADSNVKDDIDVEKIKASLQVAEKREFELLRALRVKNTYKRKQPDATFCLCNDSSTFSMKECILCKELFHIQCLKQLPNLWNNLEENVVFLCPFCQRTKRPEAKAVTISLKKLEQLRVQTLESVSMQCLLDREVKWKELVDDLLKTPEMLTISRAATDPKPRNTRSAHLTLSNENKGILETLLFRGFLLELDVPENKLIYKILHKLDREPINKVSTFDESTINIELINETCWLENELSSSCLMSSAKEKNNEFPLYMKNIGYDKSHTDDYQLFTLGKKKISSVTTMCRRKRKMPKTEDDLDQPENSKMNELLHNIETRKNKQKNIMNVEDEEENECEAKECLRPTGEHVDWVQCDFCKNWLHMICIGVTKGEVDDQTEFMCSLCKKVDGGNSTDDKNREDDDDDNDDDDRLLLMEYTNRNSPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-