Basic Information

Gene Symbol
Xbp1
Assembly
GCA_035079395.1
Location
JAVHKZ010000007.1:4711143-4712556[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-13 5.5e-10 39.6 11.4 2 58 57 113 57 118 0.93
2 2 0.00046 0.5 10.9 6.1 26 63 95 132 94 139 0.82

Sequence Information

Coding Sequence
ATGAACGTTAATAGTTCGAGGAGAACTATTATAATTAATGGTATCAGATCCAATATCCTGTATCCCGCCTCGAATAACTCGCTAGCCGTATGTACCATGGATACGAACGTCAATAGTTTAGACATTCAGAAGAAAGGTCGGAAAAGATCTTTGGAACATTTGtcatttgaggaaaaattattgagaaaaaaactaaaaaatcgcGAAGCGGCCCAATCATCAAGAGATAGGAAGAAAGCTCGTATGGACGACCTGGAAAAATCAGTCAAAGTTTTAGCGAGAAGAAATAATGACCTCTCCTGTCAGGTAGCAGACTTGAAATGCGAAAGGACAGAATTATGTCACAAAGTAACAGAATTACAACTGGAGAATGATAGATTGAGAGAGGAAAATCGATGTTTACGTAACGGATGTTCTCTTGAGTCTCAAACAGGATCTGCTGAATCCTTTGTTTTCCCTCTGCTGAAGGGTCACTCGAGACAGCCGGTAACGTTCCCGAATCCTCTCACGATTCAAATAGTTCTCCTCCAGATGATTGCCTTCATTGGTTCGCTGAAAATTGCGACTGCGATCTCACCAATCTTGATCAATTGGTCAAAGACCTCTTCGCTCAATCCAACAGATTATGATAAATTCATCGACGAAATGGTGGGGTCGTCATCAACGTTGTTGGAACCCAGTAGAACAGAATCAGAATTACCTACAAGTTGTATCAACCGCTTAAGTTTACCTGAAATCGCATCTTTTGACGGTAACTCCCTAATTGATACGTCTTCGTTACTCTTCAATGAGGAAGAACCTTCAATTAGTGCTGATACCAAAGATATTGTCACtgaaaatgagaaaggaaaTGTTCTGATTCCTTTATCCGAAATCAAAGAAGAGTCGAAGTTTATCATCTCACCAGAATTGAAACTCGAAGTCGGATGTACGACGAGCGATGAAATGTTCGTTGAAATGATTTCCGAGGAAGTGGTTGTCACATCAGAAGATGTGATCACGTCAGAGGATGCATCATTGTACGAAGCATATGTAATTAAGCCGGATATGAATAGTGTTTGTAGTGATACAGACATAGATGAAAGGAATAGTGACCAAGGGTACGAATCAATTGACTCTCCTAATAGTGACATTGACCATTCCTTTTCTGAATTATTCCCTGATTTGGTTTATTAA
Protein Sequence
MNVNSSRRTIIINGIRSNILYPASNNSLAVCTMDTNVNSLDIQKKGRKRSLEHLSFEEKLLRKKLKNREAAQSSRDRKKARMDDLEKSVKVLARRNNDLSCQVADLKCERTELCHKVTELQLENDRLREENRCLRNGCSLESQTGSAESFVFPLLKGHSRQPVTFPNPLTIQIVLLQMIAFIGSLKIATAISPILINWSKTSSLNPTDYDKFIDEMVGSSSTLLEPSRTESELPTSCINRLSLPEIASFDGNSLIDTSSLLFNEEEPSISADTKDIVTENEKGNVLIPLSEIKEESKFIISPELKLEVGCTTSDEMFVEMISEEVVVTSEDVITSEDASLYEAYVIKPDMNSVCSDTDIDERNSDQGYESIDSPNSDIDHSFSELFPDLVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-