Basic Information

Gene Symbol
cnc
Assembly
GCA_035079395.1
Location
JAVHKZ010000002.1:19039663-19052388[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-17 2.1e-14 53.7 8.5 3 63 408 468 406 470 0.95

Sequence Information

Coding Sequence
ATGTTATCCGTCGGTCCCTCAGCACGACGTATGACCCCCAATAAAAGAAAAaGTCGATCGATTCCACCTTACGTCAGATCAATGGGCATGGAGCATAGATGGGATTTTCCTACTATGAATTTTCCTGATCCAAATCATGGATCCTCGTATCATCATCACCACCATTATCATCCGACGGCAGCTTCGGCCTCGTCTCATTACTCGCCATCAATGGCGAACACCTATCCATCGCATCATTTACAAATAGCCGCTTCAACGGAAAATTCAAACGCTCGTAGTGCTCTTATACCAAATTCCGGGTTACCCGGATCCATGAGTGATCCGAACCACGTATCTTATTCTGGTCTTAATAATAATGGCTGTAGTGTGGGAACGACAGTTGCCAATTCGATGAATTTAGCCAATAACTCTGTCGCGGAAACAGTGATCAGCAGCGACAATGCGGCACCCGCATTCAAAATCGAGCCCAGTCACCAAGATGTTGTTTATTCTTATCAAAACAGTGGTACCGAAATGAATCACACGCCCGAAGGACTTCTCCTAtcgtctcttttgaacgacGAAGATTTGCAGATGGTGGACATGGCCATGAATGAAGGAATAGCAGGAATGTATCCAATGCGTATGCCAGATAATGGTTGTAATATGACGCAGAATTGCGTCGAACGGGGCACAGACTCGGACAGTGCCGTCAGCTCTATGGGCTCAGAACGAGTACCATCCTTATCGTCGGATACTGAATGGATGGAGACAAATTCTGATTCTGGACACACACCTGCCGACCACCTTACATCTGACTACTGTAAGTACAGGTGGTACGATAATTATGTGTACGGACCCCGAGTCCCCACGACCGGAGAAAGCTCACCAAACAGTACGTCGTCGAGACTGTCTCAATTACCGCAAAAGAAGTATCAACTTTACGGTCGAAGAAGTTTTCAAGACCAAAATACGAGTCATCATATTATGCATAATCACACGTATCACGTGCCGCCGGAGGCAATGAATGGTGCTACTGGAACGATTCAAAGACCAATTTTCCGTGATAAGATGAGATCTAAGTCAGGTCGTAGAAGTGAAGATGAGCAAATGACTCGCGACGAAAAACGTGCTAAAAGTTTGAGCATTCCGATAAATGTAtttgatattattaatttaccAATGGAcgaattcaatgaaaaaatatcaaaatatgaTCTCTCTGATTCGCAATTATCTCTTATTAAGGACATcagaagaagagggaaaaataaGGTTGCTGCTCAAAACTGTAGAAAACGTAAACTAGATCAAATTACTAGTCTTGAAGAAGAAGTAAAACAAATGAAAGACcgtaaatataaattattaagTGATCGAGAATTATTAATGCGAGAAAAACAAAGATATCAATCTAAATATATTCAGATCTACAGGCACATAATGTCGAAATTAGAAGAACATGACCGACACGAGTTTCAACTCTATGAATCTACCGGGCTGCCGTCGACCAATGGAAGTAATGGATGTAGTTTACCACTAGACATGAATCATTCATCTGGATTTAATTCACGAGCTTCTAAAAATAAAGATCGCAAGCCGTGA
Protein Sequence
MLSVGPSARRMTPNKRKSRSIPPYVRSMGMEHRWDFPTMNFPDPNHGSSYHHHHHYHPTAASASSHYSPSMANTYPSHHLQIAASTENSNARSALIPNSGLPGSMSDPNHVSYSGLNNNGCSVGTTVANSMNLANNSVAETVISSDNAAPAFKIEPSHQDVVYSYQNSGTEMNHTPEGLLLSSLLNDEDLQMVDMAMNEGIAGMYPMRMPDNGCNMTQNCVERGTDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHTPADHLTSDYCKYRWYDNYVYGPRVPTTGESSPNSTSSRLSQLPQKKYQLYGRRSFQDQNTSHHIMHNHTYHVPPEAMNGATGTIQRPIFRDKMRSKSGRRSEDEQMTRDEKRAKSLSIPINVFDIINLPMDEFNEKISKYDLSDSQLSLIKDIRRRGKNKVAAQNCRKRKLDQITSLEEEVKQMKDRKYKLLSDRELLMREKQRYQSKYIQIYRHIMSKLEEHDRHEFQLYESTGLPSTNGSNGCSLPLDMNHSSGFNSRASKNKDRKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-