Aaen038444.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- Mtf1
- Assembly
- GCA_963576565.1
- Location
- OY755041.1:108646959-108674938[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00031 0.038 16.5 2.3 1 23 102 126 102 126 0.96 2 12 0.047 5.8 9.6 0.1 1 23 132 156 132 156 0.96 3 12 0.0061 0.75 12.4 0.7 2 23 163 186 162 186 0.93 4 12 1.9e-06 0.00023 23.5 2.5 1 23 191 215 191 215 0.96 5 12 0.13 16 8.2 0.2 8 23 219 234 218 234 0.94 6 12 0.82 1e+02 5.7 0.1 1 21 240 262 240 263 0.93 7 12 0.15 18 8.0 0.5 8 23 278 293 273 293 0.93 8 12 0.48 59 6.4 0.2 1 23 299 323 299 323 0.94 9 12 0.0061 0.75 12.4 0.7 2 23 330 353 329 353 0.93 10 12 0.079 9.7 8.9 0.9 1 18 358 377 358 382 0.89 11 12 0.00011 0.014 17.9 4.2 1 23 388 412 388 412 0.98 12 12 0.00012 0.014 17.8 2.6 1 23 418 443 418 443 0.96
Sequence Information
- Coding Sequence
- ATGACCAGCTGGGACACAAAACTGCAGGACATGATGGCCCTGGATAGGGCAGTTGACGAAAATTTTGGCCAGTTTCTGTTGGATTTGGATCGTGAGGAGCAGATGAACCAGCCCAAAAAAGACGATTTGAGTTTATCCAAGGACGAAAAAAGCGAGGATGACGAGGGatATATTTCAAACAAGTCTCCTAGCACCAAAGATATGCAAGCCCAACAAACAAGCCCAGAAAAACCAGAAAAGCGCTACACGTTTGTATCAACCACTTTACAAGACTTTCAGGATAACAAAGATAATATAAACAGATTTCACTGTGAGTATGATGGCTGCACAAGAACCTACAGCACAGTGGGAAATTTAAGAACACACATGAAGACTCATAAAGGAGATTACAGATTTAAATGTGCTGTACCAGGCTGTGTGAAGGCTTTCTTGACTTCATACAGTCTAAAAATCCATGAGAGGGTTCATACCAAAGTCAAACCTTTTTTGTGCAACCAAGAAGGCTGTAAAAAGGCGTTTAACACCTTGTACCGTTTGAGAGCACACGAAAGATTGCACAATGGAAAAACGTTCAACTGTGAGGTGGAAGGTTGCAAGAAGTGTTTTACCACCTTGAGTGATCTCAAGAAACATATGAGAATACACACTCGGGAAAAACCTTAcagCACAGTGCGCAATTTGAGAACACACATGAAGACTCATAAAGGAGATTACAGATTTAAATGTGCTGTACCAGGCTGTGTCAAGGCTTTCTTGACTTCATACAGTCTAAAAATCCATGAGAGGAATTTTCTAAAGAATCTAAAAAATAACGGGGGTTGCACAAGAACAAGAACTTACAGCACAGTGCGCAATTTGAGAACACACATGCAGACTCATAAAGGAGATAACAGATTTAAATGTGCTGTACCAGGCTGTGTGAAGGCTTTCTTGACTTCATACAGTCTAAAAATCCATGAAATGTTTCATACCAAAGTCAAACCATTTTTGTGCAACCAGGAAGGCTGTAAAAAGGCGTTTAACACCTTGTATCGTTTGAGAGCACACGAAAGATTGCACAACGGAAAAACGTTCAACTGTGAGGTGGAAGGTTGCAAGAAGTGTTTTATCACCTTGAGTGATCTCAAGAAATATATGAGGATACACACTCGGGAAAAACCTTAcagATGTAAAGAGGATGGCTGTGGAAAATCTTTCTCAGCAAGTCACCATCTTAAAACACACTTTCGAATTCACAGTGGAGAGAAACCTTACGCATGTAAAGAAACCGCAGAATGCCACAGAGCTTTTGCCACCTCACACAGTTTGAAGTCGCATATTAAAACTCATCAGAAAGGAGACAAATATAACGGGCAAGTTAAACTTGAAAAGAATGGTactaatataattattttgagtgaaaaacTGGAGATGCAAGATGCCAAAGACATTACAGATTATACCTTTGAAGATGTTTTGAAACTGGATGATCTTCAAAGCAAACTTGATATAAAAGACGGCTCAGAAGATACCCAAGAAATTTCATCCATGCTAGAAACTCCTACAATGGAAATAAACTTTAACAACATTTACGGCAACTTCAACTACTCAAACAATGACAATAGTAACAACGTTAAAAATAGTATTTCATCAAACATTGATTCAATAAAAGATTCTATAACACAGCTGCAAATTGAAAGCAAAGCTAAATATGCCAATGTGATCGAAAACGATATTACCGATCAATTCGAAACAGCAAACGGTTTGAAAAATTACGCCACAGTCAACACTGCTGAACCTGTCGATATTAAAATTCCGTTTAATATCGGAACAGAGAATATGGAAAGCGTGGTTAAACATGAAAGTTTGATAAATCAAAGCCAACCCGAAGTGGAAGAGAATTCGTTGATCACTGAATTTGAAAACGCTGGTATAAATATGTATGATCCTACCTGGTCCAATTTTGCCGCATCCGGTTTTAACGagaatatgtttttaaacaGTAACGAATCTAAGATTCAGATTGTAGATGTCAAATCTGCTGTGGCTCCACAAGAGATTTCCCCGCTGTTCGTTCAAAAAGAAAGAAGAGTTTTGACATCTCCCGCTCCAGTTCAAATGTCATTGGTTACTCACGAAGAAGTCACAAGCCCCTGGGCAGTTAGTAACTACTCAAATGTCGCTCAAATGGAAGTATTTCAGGGAAACCTTGATGAAAATCCACTAACAGCTATTTCTACAGCCGTTCAAAGTTATATGAACCTACCAGAAGGTAACAACCCACAGATATCTGTTAACTTGCCACAGAAAAGTGTTGATCTAAATCAAGCGTCATCAGTCGTGCAAAGCTATGAAGTTGTCGATCCACAGATATCTGTTAATTTGCCACAGGAAAGTGTTGACCTAAGTGATGCTTCATCAACTCTTGCTGTTCTGTTTAATAATTCTCCAGAAGTCAGGACTGAACAAACCCTCTCAAACAACCGggatattttgaaaaacttgtCAGTTGAAGCGGAAATTTGCAAATGTACCGACTGTAAGTGTGAGAGTGTTGAAGATAGCTGCCAAAATTGCTCTGCTGATGCTAATAATTTAAACGATTTTCCGTATAATGCCGACAATTTTGTAGATGTTACTAATGTAGATATGGTTGATGTTTCTATTGATAATAATGTATGCGAAGTTGataatttaaatattgttgAGTCAGAAATTCGTGCAAAAGACCCGTTAGAACAAAATTGTCGATGCGGCAATAATTGTGAAAATATAAGTCATTGTTGTTCTCAAATTGTTCAAAAAGCTTGTGGTTcgagaaaaaaatattgtggAGAGGGTGATAATACAAAACCAAATCCTTTGGTAGCTAATAACAGCGAAACATTAAGTTCCCATTTAAATAATTCTAAACATTATACACAACCACAAAATTCTGCTTGTTGTGCTAATAATTGCTCACCTAACGCTCGCAATATTTGTAACTGTAGCAATAATAACTGTTCTAATATTGCTGTTGATGTTGAAAATTTAATAGGTATAAATGTAATAAGCGATGGAAGTTTTGAGGCATCTCAAACTTCCGACAATCAAGGTTTTAATAAGTCTCAAGGAAATAATCCGGGTTGTTCTTGTCATTGCGGAAAAAATGCCGTAAACGGTTGCAAGTGTGGCACTAAAAATACGGGAAAACAAGAAAGTAAATGTAGTGGTCCAAATAATTTGGTGAAAATGCTAATGGGGGTGGTTAAAGTAACTGACGGTTGTAGGGATAAGGGGGAACAGTGTTGTGTGATTTTGTGCCTTAAAACTATGGAAAATTTACAGAAAGTTATGAATTTTGCTTCGAGTTGTCGTGGGTTTCAAAATTTTGGAGGTCTAAGGCCTTTTGTCAATAACTGCGGtttgaatatttaa
- Protein Sequence
- MTSWDTKLQDMMALDRAVDENFGQFLLDLDREEQMNQPKKDDLSLSKDEKSEDDEGYISNKSPSTKDMQAQQTSPEKPEKRYTFVSTTLQDFQDNKDNINRFHCEYDGCTRTYSTVGNLRTHMKTHKGDYRFKCAVPGCVKAFLTSYSLKIHERVHTKVKPFLCNQEGCKKAFNTLYRLRAHERLHNGKTFNCEVEGCKKCFTTLSDLKKHMRIHTREKPYSTVRNLRTHMKTHKGDYRFKCAVPGCVKAFLTSYSLKIHERNFLKNLKNNGGCTRTRTYSTVRNLRTHMQTHKGDNRFKCAVPGCVKAFLTSYSLKIHEMFHTKVKPFLCNQEGCKKAFNTLYRLRAHERLHNGKTFNCEVEGCKKCFITLSDLKKYMRIHTREKPYRCKEDGCGKSFSASHHLKTHFRIHSGEKPYACKETAECHRAFATSHSLKSHIKTHQKGDKYNGQVKLEKNGTNIIILSEKLEMQDAKDITDYTFEDVLKLDDLQSKLDIKDGSEDTQEISSMLETPTMEINFNNIYGNFNYSNNDNSNNVKNSISSNIDSIKDSITQLQIESKAKYANVIENDITDQFETANGLKNYATVNTAEPVDIKIPFNIGTENMESVVKHESLINQSQPEVEENSLITEFENAGINMYDPTWSNFAASGFNENMFLNSNESKIQIVDVKSAVAPQEISPLFVQKERRVLTSPAPVQMSLVTHEEVTSPWAVSNYSNVAQMEVFQGNLDENPLTAISTAVQSYMNLPEGNNPQISVNLPQKSVDLNQASSVVQSYEVVDPQISVNLPQESVDLSDASSTLAVLFNNSPEVRTEQTLSNNRDILKNLSVEAEICKCTDCKCESVEDSCQNCSADANNLNDFPYNADNFVDVTNVDMVDVSIDNNVCEVDNLNIVESEIRAKDPLEQNCRCGNNCENISHCCSQIVQKACGSRKKYCGEGDNTKPNPLVANNSETLSSHLNNSKHYTQPQNSACCANNCSPNARNICNCSNNNCSNIAVDVENLIGINVISDGSFEASQTSDNQGFNKSQGNNPGCSCHCGKNAVNGCKCGTKNTGKQESKCSGPNNLVKMLMGVVKVTDGCRDKGEQCCVILCLKTMENLQKVMNFASSCRGFQNFGGLRPFVNNCGLNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -