Aaen061576.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755045.1:72263890-72273572[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.052 6.3 9.5 0.9 1 23 170 193 170 193 0.93
2 16 0.25 31 7.3 3.8 1 23 202 224 202 224 0.98
3 16 2 2.5e+02 4.5 3.5 1 23 327 350 327 351 0.86
4 16 1.6 2e+02 4.8 0.3 2 23 359 380 358 380 0.95
5 16 0.2 25 7.6 1.7 1 23 389 412 389 412 0.97
6 16 0.042 5.2 9.8 0.2 1 23 425 447 425 447 0.97
7 16 0.65 79 6.0 5.1 1 23 456 478 456 478 0.98
8 16 0.00014 0.017 17.6 3.0 1 23 488 510 488 510 0.98
9 16 0.0011 0.13 14.8 3.7 1 23 521 543 521 543 0.98
10 16 0.00047 0.058 15.9 0.3 1 23 552 574 552 574 0.98
11 16 0.13 16 8.2 4.8 1 23 583 606 583 607 0.97
12 16 0.71 86 5.9 5.9 2 23 618 639 617 639 0.97
13 16 0.044 5.4 9.7 2.9 1 23 650 672 650 672 0.98
14 16 5e-05 0.0061 19.0 3.2 1 23 681 703 681 703 0.99
15 16 2.2e-05 0.0027 20.1 0.4 1 23 712 734 712 734 0.95
16 16 2.3 2.8e+02 4.3 3.6 2 23 744 766 743 766 0.96

Sequence Information

Coding Sequence
ATGTGGGGAGATGCAGGGAATGAGGGGAGCCTAGACCTCATGGAACCTTTGTTTGAAGTTCCCAGCCACAAGATCTTTCAGGGAACTGCCTTGGAGTTAAAAGGAGAAGATATCAACATTCTAGAGAATCCTTCAGAGAACCCTATAGAAAATAAAGAAGATATTCCTCTGGATGTCATCATCAAAGAGGAGGAAAAAAAGGATTCTGAATATCCTTCTAATGGttcaGTAAAATCGGAACCGACAGAAAAAGTCTACCCCATAGGTAAGAAGaggaaaaaatttgaaaaagttcTCACAAAAGGTTACACTTTGGACACATATAAAGAAGAACCTATTTTAGATATATCCAAAGTGTTTAAGGACaactttataaattttgaaaaacaacagTTTCATCaacaaatttttgataaatttgttgAAGATTTCGAAGCTGAGTTAAAAGTGACTGATCTTGAAAATCACTACCTCAAACATATTCGCCGAGCAGCAAAATTGGAAGTTTATACCTGTTCTATCTGTCAATATCAGaccataaaaaaatcaaatatcagACTGCATTTGTTTTTAATTCATAAAATAGAAATTAACACTAATACTTTTAAATGTTTACAATGTTCATATACTTGTAAGAATGTCAAGGGcataaaaaaacatgttttaacaCATGAGAAAGAAGAAACTCAGGAACCTGTTTTAAATGAAAAGAATGAAAATGATTCTGAtattgaaatgttttttaataatgttGATGATACTTACTTTTCcaatgatgatgatgatgaagaTTTTATTCCAGAAAAATCCGGTAAAAGGAACCAGTccatcaaacaaaaaattacttATACTGATGAAAATAATGAAGTTTCAGATGACTTTTCGACATCAGATGATGAACCTTTGCAAAAAAGAGTcaatcaaaataaaaagaaaagcaatagtccagttagaaaaaaatacaatgtaaataaaattcacAAATGCTTAAAATGTGATTTTTTCGAAGGTGTGAAAAAGTCTGAATTAACTAAGCACATTCAGATCCATCATCCAGAAGATTTAAAAGTACTTTCATGTGACTTTTGTGTGTATGAAACAGGAGATAAAGAAGATTTTAATGAACACAAACAATCTCACAGATGTCCAGATAATATGAGAAAGTTTCAGTGTTACAAGTGTGAAATGCAATATTTGGACAAGTGGAAGTTAAAGAAACATTTGTTAAAGGTTCacgaaattaaaacaaaagatATTGATTCCATTAAAATTTACAAGTGTAACGTTTGCGAGTATGAGACGGATCTTCCAAAATCTTTACAAATTCATGAATTATCACACAAAAACCCTGATGAAATCGAATGGTTTCAGTGCACTCAATGCGAGTTTAGAACTAAATTTAAGAAATCTTACACAGAACATCTGTTTAGACACAAAAAACCCGAAGAGATAGTTAAAAGCTTCATGTGTGAAATGTGTAGTTACAGTTGTCGAACTAAAGGTGCTCtcaaaaagcatttattaaCACACAAAAGTGTCGAGGATACCAACATCACCTGGTACAAATGCCCAGAGTGTGATCACAAAACCAAGTTTAGAAACCACTTAAAAGTGCATCTGGCAGTCCACAAGGATCCGTCTGAAATCAAAATGTACATCTGTGAAATTTGCGGAATGCAAAGCAAACGAAAATGGAATTACGAAATGCATCTCCTAACTCATAAAGATAATGAAGAAGTTGAAATGTTCAAATGTGCAGCTTGTAATTACAAAACGAAATTCAAAGATAGATTAAAGAGACATTTAAAGAAAGGACATCACGGCAACAGGGGGCGTGAAGGGAAGCTTCAGAGGTGTTCAATCTGTAATTACGAATGCAATAATAGAAAAGTCTTCTGCCGTCACGTGATGAGCCACAAAGAAGGCATTGATTCGACAGATGGCGCGTATACGTGCGACGTTTGCGGGTTTAAAACCATGTATAAGAGTTCGTTTGACAAGCACAAAACAACCCATAAAAGCCTTGACGAAGTGGAAACGTTTAGGTGCCCAGAGTGCGACTACAGAACTAGGTTCAAGGGAAACCTAAAACACCATGTGAACACCCACAAAGATCCCAGTGAAATCCCAATGTTTAAATGTGAAATATGTGGAATTCAGTTTAGAAGAAAGGAGAACTTGAGTGTGCATTCGTTGTTGCACAAAAGCCCCGACGAGGTTCCCATAATAAAATGCACACTGTGTTCGTACCACACGAAATTCCGAGCGTATATGGTCACCCATTTGAAAAAGACGCATAAAATAATCACGAGAAAAAGCGAGTTTAAAGATTATGCCACTATTATTGATCCGATGACTAATAATGTTCCAATTCAACAATAG
Protein Sequence
MWGDAGNEGSLDLMEPLFEVPSHKIFQGTALELKGEDINILENPSENPIENKEDIPLDVIIKEEEKKDSEYPSNGSVKSEPTEKVYPIGKKRKKFEKVLTKGYTLDTYKEEPILDISKVFKDNFINFEKQQFHQQIFDKFVEDFEAELKVTDLENHYLKHIRRAAKLEVYTCSICQYQTIKKSNIRLHLFLIHKIEINTNTFKCLQCSYTCKNVKGIKKHVLTHEKEETQEPVLNEKNENDSDIEMFFNNVDDTYFSNDDDDEDFIPEKSGKRNQSIKQKITYTDENNEVSDDFSTSDDEPLQKRVNQNKKKSNSPVRKKYNVNKIHKCLKCDFFEGVKKSELTKHIQIHHPEDLKVLSCDFCVYETGDKEDFNEHKQSHRCPDNMRKFQCYKCEMQYLDKWKLKKHLLKVHEIKTKDIDSIKIYKCNVCEYETDLPKSLQIHELSHKNPDEIEWFQCTQCEFRTKFKKSYTEHLFRHKKPEEIVKSFMCEMCSYSCRTKGALKKHLLTHKSVEDTNITWYKCPECDHKTKFRNHLKVHLAVHKDPSEIKMYICEICGMQSKRKWNYEMHLLTHKDNEEVEMFKCAACNYKTKFKDRLKRHLKKGHHGNRGREGKLQRCSICNYECNNRKVFCRHVMSHKEGIDSTDGAYTCDVCGFKTMYKSSFDKHKTTHKSLDEVETFRCPECDYRTRFKGNLKHHVNTHKDPSEIPMFKCEICGIQFRRKENLSVHSLLHKSPDEVPIIKCTLCSYHTKFRAYMVTHLKKTHKIITRKSEFKDYATIIDPMTNNVPIQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-