Basic Information

Insect: Aspidapion aeneum
Gene Symbol: -
Assembly: GCA_963576565.1
Location: OY755045.1:20584314-20587325[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.2 1e+03 2.6 0.1 1 23 39 62 39 62 0.90

2 14 0.022 2.6 10.7 2.6 1 23 71 93 71 93 0.98

3 14 0.045 5.5 9.7 0.1 2 23 186 207 185 207 0.97

4 14 1.5 1.8e+02 4.9 2.0 2 23 246 268 245 268 0.93

5 14 2 2.5e+02 4.5 6.0 1 23 309 331 309 331 0.97

6 14 0.00021 0.026 17.0 2.2 1 23 341 363 341 363 0.98

7 14 1.7e-05 0.0021 20.4 3.3 1 23 372 394 372 394 0.99

8 14 4.5e-05 0.0055 19.1 6.0 1 23 403 425 403 425 0.99

9 14 2.4 2.9e+02 4.2 1.5 1 23 434 458 434 458 0.92

10 14 0.0033 0.4 13.3 0.2 2 23 474 495 473 495 0.97

11 14 4.8 5.9e+02 3.3 1.0 1 23 507 529 507 529 0.86

12 14 0.0001 0.012 18.0 2.4 1 23 538 561 538 561 0.97

13 14 8e-05 0.0097 18.3 2.7 1 23 570 592 570 592 0.99

14 14 0.057 7 9.4 2.7 2 23 602 624 601 624 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.2	1e+03	2.6	0.1	1	23	39	62	39	62	0.90
2	14	0.022	2.6	10.7	2.6	1	23	71	93	71	93	0.98
3	14	0.045	5.5	9.7	0.1	2	23	186	207	185	207	0.97
4	14	1.5	1.8e+02	4.9	2.0	2	23	246	268	245	268	0.93
5	14	2	2.5e+02	4.5	6.0	1	23	309	331	309	331	0.97
6	14	0.00021	0.026	17.0	2.2	1	23	341	363	341	363	0.98
7	14	1.7e-05	0.0021	20.4	3.3	1	23	372	394	372	394	0.99
8	14	4.5e-05	0.0055	19.1	6.0	1	23	403	425	403	425	0.99
9	14	2.4	2.9e+02	4.2	1.5	1	23	434	458	434	458	0.92
10	14	0.0033	0.4	13.3	0.2	2	23	474	495	473	495	0.97
11	14	4.8	5.9e+02	3.3	1.0	1	23	507	529	507	529	0.86
12	14	0.0001	0.012	18.0	2.4	1	23	538	561	538	561	0.97
13	14	8e-05	0.0097	18.3	2.7	1	23	570	592	570	592	0.99
14	14	0.057	7	9.4	2.7	2	23	602	624	601	624	0.96

Sequence Information

Coding Sequence: ATGCCAAATTTTCAAtttAGCGACGGTAACACAGTTCTGTTTTGTCACAGTTTCTGCAAATCCGCTTCACGTGAGGACGAAAAAACCGGAAGAAAATCATCTAAAAAAGAACTATTCACCTGCACTCCTTGCAGCTACGAATCGGAAGAATTGATTGACTTAAAAAGTCACATAAAACTGATCCATCAGATCAACGGAGCTACTGAGTTGTTCCGATGTAAAAAATGCAATCAGCAAAGGGAAGATTGGAAGACTATGAAGACCCATCTTCTAACTCACGCAAAGGAAGACTTAGTCGTATTTAACTGCAGTTTTGAAACCAAGAAAAAGGAATGCAAGCCACGAACAAAACATAAAAGAGAACCAAAACAACGTAGATGTAAGATTAAGGAGTTTTATTTTGATGGTGACTTAAGTAACGATGATGAGCAACCAGAAATAAAAGCACGCTGTCATACGGCCAAGGTAAAACTTTTAGAACCAGATTTTGATGATGGTGTCAGTCTTGAAATTGCAAACGATGGCAATGAACTTGATAACAAAATTGAAGCTTTAACCTGTACCATATGTCCTTTTGAAGCTGTTGACGAGGAATCTTTTAAAAACCATTTAAAAAGTCATCAAgaattaaaacttttaaaatgcGATTTTTGTTCGTTTGAAACTGACGATGATCTTACCATGAGAACGCACGTTGATATTACCCACGGTAGTTCTAAAGATTCTACCACATTAAAGTGTAGTTTTTGCAAATTTGAAACCAGAAAAAGGTTGGTTTTAAGAAGGCACATGTATAATGCTCATCAAATAGCTACGAAAATGGTAGataaagaaaaccaaaaagGTCATGATTCTAGTTCACCCAGATCACCTTTAAGTAGACTCCGAAAAAAACGAGGTGCGAAACAAGAAAAATCCGACTGGTATTACTGTGATAAATGCGAATTTAAAACAAGATTTAGATGTAGTTTGAAAACACATGGTCTCAAACACAAATCACCGcatgaaattgaaaaaaaattcatgtGCGAAACGTGTAGTGCGTGTTTCCGAACAAGAGCCTATTTGGCGTCTCATATGCTGAAACACAAATCACTCGATGAATGCCAAACTTATCAGTGTAGCGATTGTGATTACAGAACAAAGTTTAAGTATAATTTAACGAAACACATTCTGAAACACAAAGATCCCAGCGAATGCCCCATGTTTCAATGTGAAATTTGCGGATTTAAGTGTAAACGAAAATACAACTTTAAAAATCACCAATTGACGCATAAAAGCGAGGACGAAGTTCCGGTGTATAAATGCGCCATATGTGCTTACCAAACCAAATGCAAAGATTACCTTGCCGCGCATTTAAAGAAAGGCACCCATCTAGGACAAAGAAAACGTGGTAAAGTGCGAAAATTCACTGATACTAAGTGTAATGTATGTGGCGTGCAGATGAGGGATCCCGGCAACTTGTATAGACACACGCTAACACACAAAAATATCGACGAAGTTGATGAGAACATGATTTTCAGATGCGACCAGTGCGATTACAAAACTCTCTTTAAAGGCAGGTTGGTCATGCATGAAAAAATTCACAAAAGAATGGAAGAAGTCGAAACCTTTTCATGTCCTCACTGCGACTACAAATCAAAAATGAAAGGCAACTTAAAACAGCATATAAACAAAGTTCACGTTCATCCTAGCGAACGAAAAACGTTTCAATGCCACGTTTGTTCAATACAACTGAAATCAAGTTCGAATCTCAAGACGCACTTGATGACACACAAAAGTTCTTTCGAAGCTGAAATGATCAAGTGTCAAATTTGCTCATACGAGACCAAATTTAAATCGTACATGCGGATGCATTTAAAGAAGAAACACAATATTTTGGCGCCTTCAGCGAAAAGGAGAGGGATTTCTTATACAAACCAGAACACAGATGAGCGTGGTGTTCCTCCaccatatttttaa
Protein Sequence: MPNFQFSDGNTVLFCHSFCKSASREDEKTGRKSSKKELFTCTPCSYESEELIDLKSHIKLIHQINGATELFRCKKCNQQREDWKTMKTHLLTHAKEDLVVFNCSFETKKKECKPRTKHKREPKQRRCKIKEFYFDGDLSNDDEQPEIKARCHTAKVKLLEPDFDDGVSLEIANDGNELDNKIEALTCTICPFEAVDEESFKNHLKSHQELKLLKCDFCSFETDDDLTMRTHVDITHGSSKDSTTLKCSFCKFETRKRLVLRRHMYNAHQIATKMVDKENQKGHDSSSPRSPLSRLRKKRGAKQEKSDWYYCDKCEFKTRFRCSLKTHGLKHKSPHEIEKKFMCETCSACFRTRAYLASHMLKHKSLDECQTYQCSDCDYRTKFKYNLTKHILKHKDPSECPMFQCEICGFKCKRKYNFKNHQLTHKSEDEVPVYKCAICAYQTKCKDYLAAHLKKGTHLGQRKRGKVRKFTDTKCNVCGVQMRDPGNLYRHTLTHKNIDEVDENMIFRCDQCDYKTLFKGRLVMHEKIHKRMEEVETFSCPHCDYKSKMKGNLKQHINKVHVHPSERKTFQCHVCSIQLKSSSNLKTHLMTHKSSFEAEMIKCQICSYETKFKSYMRMHLKKKHNILAPSAKRRGISYTNQNTDERGVPPPYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -