Aaen057326.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755044.1:89674158-89687063[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0042 0.52 12.9 5.3 1 23 183 206 183 206 0.95 2 14 0.0012 0.15 14.6 1.6 1 23 215 237 215 237 0.99 3 14 0.082 10 8.9 0.3 3 23 272 292 270 292 0.96 4 14 0.0074 0.9 12.2 0.9 1 23 301 324 301 324 0.95 5 14 0.0024 0.29 13.7 2.0 2 23 338 359 337 359 0.97 6 14 0.24 30 7.4 3.2 2 23 369 390 368 390 0.95 7 14 0.00032 0.039 16.5 0.4 1 23 397 419 397 419 0.92 8 14 0.039 4.8 9.9 0.9 2 23 430 451 429 451 0.97 9 14 0.03 3.7 10.2 4.3 1 23 456 478 456 478 0.97 10 14 0.01 1.2 11.7 1.8 1 23 487 511 487 511 0.92 11 14 0.017 2 11.0 0.3 3 23 535 555 533 555 0.95 12 14 0.072 8.8 9.0 2.7 1 23 564 586 564 586 0.99 13 14 0.2 24 7.7 0.8 3 23 594 613 592 613 0.96 14 14 0.1 12 8.6 2.4 1 23 622 645 622 645 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACCAACACGAAGATATAGATAAAGATGGAGATTCATTGCTACAAAGACTGCTCGCTTTAAAAGATAATGAAGACAGTTACGATGACAAGATGTGGTTTGAGGCTCCAAAGGAAGACGAATCTTCGAGCGATCTTCCCTTGATTAGAAAGGTTAGCTCTGATGGCATAGCAGGCATTGTTGTTAAGGAGGAGGAGGTGAAGTCTAATGAAATGCAGGTCAAAAAGAGGAATAATAGTGAGGAAAATGAAAGcGATGAAGACGAATTCAAAAACGAGCTGCCCACgggaaataaaaaagataaagatTATAACTTTGAATACAAAAAGGTGATCGTAAAATGTTACAAATCCAGTTTTGCAAAAGATCAACCCGAAGAAAATGTGAATTCTTTATTCAAAGAAAATGATCTAGAAACCGAAAAGGCATCTTTTCACCGGAAAATTTTTAACGACCTGTTTGAAAATATGGAAAAGAAAAAATTGGAGGAGCTCCAGTTAAGATATGTTGAATATTTGCGAACAGCTGCCGATTTAGAAACGTTTAAATGTCTTAAGTGTGACTATAAAACTATTCATAAGTCGAATTTGAAAAGCCACCTGCATTTAATTCACAAAAGGGACCTTCAAGAAACGTGGTACAAATGTCTTCAGTGTCGATATAAAGTAAAGAGTTTGGCTTCCTTGCAAAGACATCAGGAAACCCACGAAGAAAGTAGCAGTAGCAGCGATGAGGAGGCATACCTCAGCGACTTTTACGACCTGCCATTGCAAGATCGATCAAACGACGATGCGAGAGATCACTGGGACTGCGACTTTTGTCCCTTTGACACTAACGATAAAGACGCGTTTGAAAAGCACAAAATCACGCACAAAGATCCGACTGACCCGAAAAGATACATGTGCTATCGTTGTGATTACGGGGTGGTTCAAAAGAAGTCTCTTCAAAGGCACTTGGTTAAGAACCACCAGATTGAACTAAAAGgcTACCAACACAGCGAAGACTTAAAGTGTCCCCACTGTGACTACAAAACCGACTTGAAATCATCCTACAATATCCATATGATGCAACATAAAAATCCCGACGAAATCACCTGGCTCACTTGCAAGTACTGCGAATTCAAAACCAAACATAAAGCGAGTATCAGGAATCATGTTTTAAATCACGAAAACCCGGAGAAAAAGTTTATGTGTGAGGTTTGTAGTAAACGGTTTCGAACTAAAGGTGAATTACAAGGTCACAGTGTAGTGCACAAAGACATTAGTGAATTGTCTGAAATCCAAAAATGTCCCGAGTGTTCCTTTCAAACTAAATATAAATTGGGACTAAAGCAGCATATGGAACTTCACCGAGAGCCAGAGTTTATTTGTGACATATGCGGTTTTAAAAGTAGGCGTAAATATAATCACAAAATGCATATGCAGCGTCACAAAGATGAAAGGGAGTGTGAAATATATCGATGCGCGGTTTGTCCATATTATACAAAGTTTAAAGCTCATTTAAAAGCTCATCTAAATAAAGGAAAACATAAACCCATGGATTGGAAACCCAGATCTGATATATGCCCTGCAAACAAGTTTCAAAGTAAATCAACAATTTGTAGCACTTGTGGTCTTCAACTGTCTTCAAAATCAGCCCTTATAACACATTCCAAACTTCATAAAGACCCAAGCGAGATTCAAATGTATAAATGTGAAAAGTGCAATTTTGAAAGTCGATATAAGGCAAGTTATGACGTTCACAAAAAGACACACGAACCTCCTGAACTCATGGCATGCGAAGTTTGTGGCATGAAACTAAAAaagaagaattacaaaatgCACCTGCTGACCCATCAGACCGTCAGTGAAGCAGAGTTATTTACTTGTGCTCTCTGCAGTTATCAAACTAAATTTAGGGCATACCTGAGGGAGCATCTTAAGAAAAGACATAATATTATAACAGCGGGAAGACCGGGCAGAAAGATATCCAATATCATGAGGTATAAAGAGCTACCACAAGATCCAATAACGCAACATCAGCTGCAACAAGGGACCTCAATGCCAATTCCCAATTAA
- Protein Sequence
- MENQHEDIDKDGDSLLQRLLALKDNEDSYDDKMWFEAPKEDESSSDLPLIRKVSSDGIAGIVVKEEEVKSNEMQVKKRNNSEENESDEDEFKNELPTGNKKDKDYNFEYKKVIVKCYKSSFAKDQPEENVNSLFKENDLETEKASFHRKIFNDLFENMEKKKLEELQLRYVEYLRTAADLETFKCLKCDYKTIHKSNLKSHLHLIHKRDLQETWYKCLQCRYKVKSLASLQRHQETHEESSSSSDEEAYLSDFYDLPLQDRSNDDARDHWDCDFCPFDTNDKDAFEKHKITHKDPTDPKRYMCYRCDYGVVQKKSLQRHLVKNHQIELKGYQHSEDLKCPHCDYKTDLKSSYNIHMMQHKNPDEITWLTCKYCEFKTKHKASIRNHVLNHENPEKKFMCEVCSKRFRTKGELQGHSVVHKDISELSEIQKCPECSFQTKYKLGLKQHMELHREPEFICDICGFKSRRKYNHKMHMQRHKDERECEIYRCAVCPYYTKFKAHLKAHLNKGKHKPMDWKPRSDICPANKFQSKSTICSTCGLQLSSKSALITHSKLHKDPSEIQMYKCEKCNFESRYKASYDVHKKTHEPPELMACEVCGMKLKKKNYKMHLLTHQTVSEAELFTCALCSYQTKFRAYLREHLKKRHNIITAGRPGRKISNIMRYKELPQDPITQHQLQQGTSMPIPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -