Aaen044134.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- zfh1
- Assembly
- GCA_963576565.1
- Location
- OY755042.1:80156673-80171606[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.3 37 7.1 0.5 2 20 46 64 45 66 0.92 2 12 1.5 1.8e+02 4.9 3.0 1 23 180 203 180 203 0.96 3 12 5.3 6.4e+02 3.2 0.0 5 23 211 229 208 229 0.88 4 12 0.13 16 8.2 1.6 3 23 230 257 229 257 0.77 5 12 2.1 2.5e+02 4.5 0.5 2 23 260 281 259 281 0.96 6 12 4.9e-05 0.006 19.0 2.1 2 23 289 311 289 311 0.98 7 12 0.00038 0.047 16.2 0.4 1 23 316 339 316 339 0.94 8 12 0.00023 0.028 16.9 2.5 3 23 352 372 350 372 0.95 9 12 0.063 7.7 9.2 3.4 3 22 379 398 378 401 0.91 10 12 0.0095 1.2 11.8 0.7 1 23 404 426 404 426 0.97 11 12 1.6e-05 0.0019 20.6 0.9 1 23 451 473 451 473 0.98 12 12 2.1e-05 0.0025 20.2 2.6 1 23 479 501 479 501 0.99
Sequence Information
- Coding Sequence
- ATGGACCGAAGAATTTTCGACTTCAATATTAGCATCTTATTCTATATTACCCTGTATCTGACAGTCAGATGCAAGGTCTCCTTCGACTTCTCGGAGCCACTTTTTGAACATCTGAAATCCGACGAACATGACATCTCCTGTAGATTCTGCTCCAAACTATTTAGAGGAAAAATCTCGTATAAAAGACACTTGGCATCACGAGTTTGCCGaaataacaaagaaaaaataaaaactttagaGAAGTCAAAACTAGATCAATCAAGCAAAAGAACTACCTCAAAAGTAACCGTAGTgtctaaaaaacaaaatcgaaaaatacaaaattcaaaaattgtgAATAAAAAAGAGATAAAAGAAGAAGTCGATGAAACAAAAGAGGAAGAACAAGACATAAAGATTGATATTCTAGAGGAAGCATTAAACTCAATAAATATTGATGAAAATATTCAACCTGAGCAACGCGAAAACAATAAGGCcgaaaatgtagaaaataatgCAATAAAAGAGCGaaatacaagaaaaataaaaaagtttaaatactTTTGTGCTAAATGCGAAAAGGGCTTTAATGCGTTCTTTGACATATTTGACCATTTAAGAAGATGTCATGATGGAATTTTGGATTGTATCTTTTGTGATGATCGTTTTCCCAATGAGtaTCAACTCTTGGACCACATAGGGGAGCATTGTAAGAGTTTTTACTGTAGGATACATTTTAAAGCTTTCAAAACCAGATCAGAGCTAAGGGCGCATTACAAGGTGCCAAATCATCAGTTAGAATGTGGAATATGTTCCGATGTCTTAAAATCCCGATCAGCGCGATACTCACACAGGCGCAAACATTTATTCCCTGAGGAAGAGGCCAAATGTCCCCACTGTCCTCTGGTATACAAACACTATCCCAATTTGGCTCGCCATATCAAGACTTTTCACATGGAAAAGACTTATCTCTGCGAGCAGTGTGGGGTTTctTATAGCACAAATCACGCTCTTAAAATTCATGTCGAAAGAGATCATGACGGAGTGTACGAAGACAAAAAGGCAGACATTTGCTGCGAAGAATGCGGAAAGACATTTAAGTACATCAAAAATTTGAGGATGCACAAAGGCACTCATTTGGGACATACAGAGTTTTGCAGACACTGTCATGAGAGTTTTCAGAATATTGAGAAGCTGAACGAGCATATGAAGgaaagAGGTCACGAACTTTTTACTTGTGAGCAATGCTCCCAAACGTTTGTTCGTAGAGGAGTTTATTTACTACATTTGGAAAAACACAAATATTCTGGTGATGAGAAAATGAGGAAGAAATTGTACCCTAAACGAAGAAAAACAATAAAACCTAGCTTCTATAGTTGCCCATATTGTGAAAaagagtttaaatcaaaaatccAAATGAAGGAGCACGCCAGAATGCACAGCGATGACAAGCCGTTTAAATGCAATGTCTGTGGAAAATGCTTTAAGCGAGGACCCACGCTCTATGCTCACAAACGCGTCCATTTGGTGTGGAGTCCCTACTACATCAAAGATATAGAAATTCTCGAAAGGATTCAGAGACGAGTCACGAAAATACCACCCGAGCTACACAACTTATCTTACCCGGAGAGGTTGACAAGATTCAAACTAACAACCTTAAAAGAAAGAAGGCATAGGGGAGATTTAATCGAAACATATAAGATTACAAGTGGTTACTACAATTGCAATATTATAGAAATCTTTCATCAAAATCAAAACCATCAACTCAGAGGGCACTCAAAAAAACGTGAGAAAGAAAAAGCTGCAAAGCTACCaagaaagaatttttttattaatcgCGTTGTTTACATGTGGAATGCCCTAGAAGAAAATACAGTCATAGCAACAAGTGTAAACTCATTTAAAAACCGATTGGACAAAGAGTTAAAACAAAGTGCAATGAGAATGGTTCATTATAGTGCTTAA
- Protein Sequence
- MDRRIFDFNISILFYITLYLTVRCKVSFDFSEPLFEHLKSDEHDISCRFCSKLFRGKISYKRHLASRVCRNNKEKIKTLEKSKLDQSSKRTTSKVTVVSKKQNRKIQNSKIVNKKEIKEEVDETKEEEQDIKIDILEEALNSINIDENIQPEQRENNKAENVENNAIKERNTRKIKKFKYFCAKCEKGFNAFFDIFDHLRRCHDGILDCIFCDDRFPNEYQLLDHIGEHCKSFYCRIHFKAFKTRSELRAHYKVPNHQLECGICSDVLKSRSARYSHRRKHLFPEEEAKCPHCPLVYKHYPNLARHIKTFHMEKTYLCEQCGVSYSTNHALKIHVERDHDGVYEDKKADICCEECGKTFKYIKNLRMHKGTHLGHTEFCRHCHESFQNIEKLNEHMKERGHELFTCEQCSQTFVRRGVYLLHLEKHKYSGDEKMRKKLYPKRRKTIKPSFYSCPYCEKEFKSKIQMKEHARMHSDDKPFKCNVCGKCFKRGPTLYAHKRVHLVWSPYYIKDIEILERIQRRVTKIPPELHNLSYPERLTRFKLTTLKERRHRGDLIETYKITSGYYNCNIIEIFHQNQNHQLRGHSKKREKEKAAKLPRKNFFINRVVYMWNALEENTVIATSVNSFKNRLDKELKQSAMRMVHYSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -