Basic Information

Insect: Aspidapion aeneum
Gene Symbol: -
Assembly: GCA_963576565.1
Location: OY755045.1:13942539-13944227[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.1 1.3e+02 5.3 1.9 1 21 235 255 235 256 0.93

2 10 2e-05 0.0024 20.2 0.4 2 23 296 318 295 318 0.97

3 10 0.64 78 6.1 3.6 2 23 325 346 325 346 0.96

4 10 0.0013 0.16 14.5 0.2 1 23 351 373 351 373 0.96

5 10 0.05 6.1 9.5 0.1 2 23 397 419 396 419 0.95

6 10 0.063 7.8 9.2 1.2 1 23 424 446 424 446 0.97

7 10 0.0002 0.025 17.1 2.8 1 23 453 475 453 475 0.97

8 10 4.8e-05 0.0058 19.0 3.6 1 23 481 503 481 503 0.97

9 10 3e-05 0.0036 19.7 0.6 1 23 509 531 509 531 0.99

10 10 0.00012 0.014 17.8 1.8 1 23 537 560 537 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.1	1.3e+02	5.3	1.9	1	21	235	255	235	256	0.93
2	10	2e-05	0.0024	20.2	0.4	2	23	296	318	295	318	0.97
3	10	0.64	78	6.1	3.6	2	23	325	346	325	346	0.96
4	10	0.0013	0.16	14.5	0.2	1	23	351	373	351	373	0.96
5	10	0.05	6.1	9.5	0.1	2	23	397	419	396	419	0.95
6	10	0.063	7.8	9.2	1.2	1	23	424	446	424	446	0.97
7	10	0.0002	0.025	17.1	2.8	1	23	453	475	453	475	0.97
8	10	4.8e-05	0.0058	19.0	3.6	1	23	481	503	481	503	0.97
9	10	3e-05	0.0036	19.7	0.6	1	23	509	531	509	531	0.99
10	10	0.00012	0.014	17.8	1.8	1	23	537	560	537	560	0.98

Sequence Information

Coding Sequence: atGAACGCTATTCCTTTGGTGGTCTCTACTATTCCGTTCCTAAATTCAAAATCATTTAGCAACATTTGTCGCCTTTGCTTGCAAACGGAGAATCTGTTTATAATTGATGAAATCCATTGGGAAAGGTCAAAACTGAAAGGAATTTTGAATCAGTGGATATATTTTGATCGAATACGTGATAACAAGTTTCCTCAAAAAGTGTGTAAGTCGTGCATCAAATGGGCCTATAACAcggattattttttaaaacagattcAGAGAAATCAAGAAATACTGCAAATCTCGTTAGGTTATGAGCAGTTAGGGGCATCAAAGAAGGAAAATGAATTAGAAAATGTGAAAAAGAAAACCAAGATATTCTTAGAAATTCCTCAAGAAgaagtagtaataaaaattgaAGATCATGATTACTGTGAGGCTGATAATGATTCCTCtgttttagaagaaaaaaaatataaagattTATTCAAAACTGAGCCAGAACAGTCAAATGAAGTAATAACCTACCCACTAAGTGAAGAGGTGCCCTCCAATGCACTTGGTTTTGAATTAAAAGATGAAAAAAATGACTATATAATTGAAATTTTACCAGAAAATGATACAGCTTCTACACCTAGTGTTGCTGCAGATGATGAAGCTGTTGTGGAAGAAAATGACCAGGCAACTAAAATACAGggtcaaatttatttagaatGCTTTAACTACTTCTGTGGAGCCTGCAAGCAGGGATTTAAAACTGATAAAGAATTGTTACATCATAAAAAGTTCATTAAGTCACATTTTCATGGTGGTTGTATATTTATTTGTCATCCATGCAAATTTAAAACCAATGAAAGATTTAGATTTCAAGTTCACATGGATCGTCATCAAAACATAAAGTCACAACAATGTTCTACATGTGGTAAAATGTTTAGAGTTGTTGGAGATTTACGAAAGCACATTAACAAAATTCACCTAAATGTTAGGAAACCTAAATGTAAGTTTTGTTACAAAATatttgctaataaagaaagCTGTGAGGAGCATGAAAAATCACATCAAGATATAGTTTATATATGTTCATTTTGTGGTGAATCTTTTAAAGTGTGGGAGAAATGGTTTGCACATGAAAAAGGACACAAACAAAATAAGTCGAATAGGACAAGAGTTGGGAAAAGAGCACCAACTAATAATAAACCAATCCAGACACCTTGTGATCTCTGTGAAGAGATTTTGGCATCCAAGGCACAGTTGATCACTCATAGGAAAAATATACATAACCAAAGCCACTTTATTTGTCAAACATGTGGGCTCAAAACGAAATACATTCAGACTTATGAGATGCACATGACAACTCATAAGGGCTTAAGAAAATTGCATCAATGTAATTATTGTGAAAAATCATTTGTTGATGTTAAATGGTACAAAAATCATTTGAAATTACATACAAATGAAACAAAGCACAACTGTCCATATTGCTCTAAGCCTTGTATAGATAAAAGAAATCTGACTACCCATTTGCGAGTCCACACTGgcgaaaaaaattataagtgCACTCTTTGCCTGAAAGTTTTTGCAGCAAGTGAAAATCTAAAACTTCATTTAAAAACTCATGCAGGTCCTCCAACTTTTAAATGTTTACTTTGCCCTAGAGCCTTTTATATGAATTACATGCTCCAGCGCcatattaaaaagaaacataacACTTAA
Protein Sequence: MNAIPLVVSTIPFLNSKSFSNICRLCLQTENLFIIDEIHWERSKLKGILNQWIYFDRIRDNKFPQKVCKSCIKWAYNTDYFLKQIQRNQEILQISLGYEQLGASKKENELENVKKKTKIFLEIPQEEVVIKIEDHDYCEADNDSSVLEEKKYKDLFKTEPEQSNEVITYPLSEEVPSNALGFELKDEKNDYIIEILPENDTASTPSVAADDEAVVEENDQATKIQGQIYLECFNYFCGACKQGFKTDKELLHHKKFIKSHFHGGCIFICHPCKFKTNERFRFQVHMDRHQNIKSQQCSTCGKMFRVVGDLRKHINKIHLNVRKPKCKFCYKIFANKESCEEHEKSHQDIVYICSFCGESFKVWEKWFAHEKGHKQNKSNRTRVGKRAPTNNKPIQTPCDLCEEILASKAQLITHRKNIHNQSHFICQTCGLKTKYIQTYEMHMTTHKGLRKLHQCNYCEKSFVDVKWYKNHLKLHTNETKHNCPYCSKPCIDKRNLTTHLRVHTGEKNYKCTLCLKVFAASENLKLHLKTHAGPPTFKCLLCPRAFYMNYMLQRHIKKKHNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -