Aaen046155.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755043.1:11212831-11217229[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.22 27 7.5 6.9 1 23 107 129 107 129 0.96 2 13 0.0004 0.049 16.1 0.1 1 20 148 167 148 169 0.94 3 13 0.00086 0.11 15.1 1.6 1 23 258 281 258 281 0.94 4 13 0.0034 0.42 13.2 0.4 3 23 292 313 291 313 0.96 5 13 0.45 54 6.6 4.4 1 23 412 435 412 435 0.93 6 13 0.00017 0.021 17.3 0.5 1 23 454 476 454 476 0.98 7 13 0.068 8.3 9.1 1.1 1 23 536 559 536 560 0.94 8 13 0.0019 0.23 14.0 2.4 1 23 566 589 566 589 0.93 9 13 0.0022 0.26 13.8 0.5 3 23 601 622 600 622 0.93 10 13 0.00018 0.022 17.2 1.3 1 23 632 654 632 654 0.98 11 13 0.003 0.37 13.4 0.2 1 23 660 683 660 683 0.93 12 13 1.2e-05 0.0015 20.9 2.9 1 23 689 711 689 711 0.98 13 13 0.00054 0.066 15.7 2.3 1 20 716 735 716 737 0.93
Sequence Information
- Coding Sequence
- ATGAAAAAAACATCTGATCCTGATGATTCTGACCCACTGACAAGCAATTTCATTTTTAGGACAGAGCCAGAAGATGATAATTTTACTGATGATGATTCAAGTTTTTTTATTACCGAATCTGATGTAGCAAATTTAAATGCTTATCTTGTTCAAACGCAATTTGTAGAAAAAGCTTTACCACTTTCTGACCTCGATAAGAAATTTAAAGAGGAAAAGGACGACTTTGATAGTAAGGATTCTTCAGAAGATAAAACCGTAAATCATAAATTGACAGGAGGCAATTCGATAAAACATTATTACAAAAGAACGTTAAATGGATTTTGTTGCTCCATATGTTTTAAAAGTTATCAATCACATAAGCTTCTTAGATATCACATATCCAACCACAGATTTGCAGAACGAATGCCTACATATAGAGTTGATGAAACCACACCGAAAACGTTTACATGTAACACATGTTCGAAAGCATTCTCGACACAGGAGAATATTGAAGATCATTTGGAAATTCGTACTTATTTATGTACAATTtgtaaagaatttttttttcacccACTGCATTTGGGTTGTCATTTAGCTGAGCATGACCCTGATGGAAATGTATGCTGTACGTTTTGTGAATTCAAAACTCATTCAGCCACTGATTTAAAACGTCATTTCGACAAAGACCACGCCAATCACAAAATACGATTTAAATATCCTTTGTGCGATGCCTCTTATGCTACACTTGTACACGAACATAATATCGACAGAGACCAGCGTTATATTAAGAACTATAAATGTGTAGTCTGTAAAAAATTCTTCAGCGCAAGTAGGAGCCTTTTGAGGCATCAGCTAGACAAACACAGAGTCCATACaggttttaataaaattctGTGCAATTTGTGCCAGCGGAGTTTTGCTTCAGAAGGAACTCTAGAAGATCATACGAAGAACATGCATAGCGAAATTTCCAATAGTTCCAAAAGgacgGATATAGAAGAATATAATTTCATCGATAGTGAATCAATTTTTGTCGTTATTGAATCTGATATGGGCAATTTAAGTGGTAATTTCGTTAAAATGGAATTTTTAGAAGATGTTATAGCAGATAAGAAATTTTTTGTTCTTGATAATCAATTGAAAGGGGAAAAGGACGGCTTTGAAAATGACGTTTTGTCAGAAGATAAAACCATAAATCATAAATTGGCAGGAGGGCCTTTTATAAAACGTTATTACAAGAAAACGTTAAATGGATTTTGTTGTTCCATATGTTCAAAGAATTATCAATCATTTAAGCTTCTCAGATATCATATATACAACCTTCACAGATTTGCAGAGATGATCGCCTCATACAGGGTTAATGAAACTATACCGAAAACGTTTACATGTAACACTTGTTCCACAGCATTCTCTACAAAGGACAATATTGAAGATCATCTAGAAAGTCATACTTATTTATGTACAATCTGTAGAGAAAAATTTTTTCACCCACTGCATTTGGGTTGCCACTTAGCTGAGCATGACCCTGATGGAAATGTATGCTGTACGTTTTGCGAATTCAAGACTCATTTAGCCACTGATTTAAAACGTCATTTCGACAAAGAACATGCCGATCACAGAATACGATTTAAATGTCATTTGTGCGATGCCTCTTATTCTTCACTTCTTCGCGTAAACCAACATATCGATAGAGACCATCATCATATGAGGATACACCATAATTGTGTAGTCTGTCAAAAAATCTTTACCACAACTAAAAGCCTTTTGAGGCATCAGCTAGAAAAACACAGAGTCCATACAGGTACTTCTCATAAAATTCTGTGTAATTTGTGCCAGAGAAGTTTTGCTTCAGAAACAACGCTAAAAGAACATATGGGGAACATGCATAGTAAAATTTCCAGTAATTCCAAAAGGTTTGTATGTGATACGTGTGGAATGACATATGGTTACAAAAAATCTTTAAAGCTTCATCAAAAAAGTCATTCTGGAGTAAAGCCCTTTTTGTGTGAGCTTTGCCCACAATCGTTTAAAGCACTATCATATCTAACAGTACACGTAAAACAAGTTCATACCAACGAAAGGCCATTTAAATGCGACAtatgtaaaatttgttttaagaCAAGCAGTACTTTAGCTAAACATAGAGAAGTTCATCGTGAAAAACGCTTCGAGTGTCCTTTCTGTAGTAAAAAATTTCGAAGACGCCAGCATTTGGAACTGCATTCCAATTCTTGTAGTGTTTAG
- Protein Sequence
- MKKTSDPDDSDPLTSNFIFRTEPEDDNFTDDDSSFFITESDVANLNAYLVQTQFVEKALPLSDLDKKFKEEKDDFDSKDSSEDKTVNHKLTGGNSIKHYYKRTLNGFCCSICFKSYQSHKLLRYHISNHRFAERMPTYRVDETTPKTFTCNTCSKAFSTQENIEDHLEIRTYLCTICKEFFFHPLHLGCHLAEHDPDGNVCCTFCEFKTHSATDLKRHFDKDHANHKIRFKYPLCDASYATLVHEHNIDRDQRYIKNYKCVVCKKFFSASRSLLRHQLDKHRVHTGFNKILCNLCQRSFASEGTLEDHTKNMHSEISNSSKRTDIEEYNFIDSESIFVVIESDMGNLSGNFVKMEFLEDVIADKKFFVLDNQLKGEKDGFENDVLSEDKTINHKLAGGPFIKRYYKKTLNGFCCSICSKNYQSFKLLRYHIYNLHRFAEMIASYRVNETIPKTFTCNTCSTAFSTKDNIEDHLESHTYLCTICREKFFHPLHLGCHLAEHDPDGNVCCTFCEFKTHLATDLKRHFDKEHADHRIRFKCHLCDASYSSLLRVNQHIDRDHHHMRIHHNCVVCQKIFTTTKSLLRHQLEKHRVHTGTSHKILCNLCQRSFASETTLKEHMGNMHSKISSNSKRFVCDTCGMTYGYKKSLKLHQKSHSGVKPFLCELCPQSFKALSYLTVHVKQVHTNERPFKCDICKICFKTSSTLAKHREVHREKRFECPFCSKKFRRRQHLELHSNSCSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -