Aaen044113.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755042.1:79820198-79856727[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.055 6.7 9.4 2.5 1 23 494 517 494 517 0.96 2 11 2.1 2.6e+02 4.4 0.2 5 23 525 543 522 543 0.90 3 11 0.0037 0.45 13.1 2.4 2 23 574 595 573 595 0.96 4 11 9.8e-06 0.0012 21.2 0.3 2 23 603 625 602 625 0.97 5 11 0.0014 0.18 14.4 1.2 1 23 630 653 630 654 0.92 6 11 0.0004 0.05 16.1 0.1 2 23 663 684 662 684 0.96 7 11 0.04 4.9 9.8 0.2 3 22 691 710 690 713 0.88 8 11 0.0012 0.15 14.6 2.0 1 23 716 739 716 739 0.98 9 11 0.00042 0.051 16.1 0.4 1 23 798 820 798 820 0.96 10 11 3.9e-05 0.0047 19.3 1.3 1 20 825 844 825 847 0.94 11 11 0.00025 0.03 16.8 4.7 1 23 853 875 853 875 0.98
Sequence Information
- Coding Sequence
- ATGTTCTGGAGAACCCTGGAAATATTTAGAATAACTATGGAAAACTTGAGAAATGTTCTGGAAATCTTCAGGACAAATCTTGAGAAACTCGGAAAATATTCTGAAAACTCTGGACATGTTCAGGAAAAATCtggaaatgttcaggaaaaATGGCCTGCTGATACAAGTCAAAGAATCTACTGGCAGACATGTTTGGGAATTCAGGAAGCACCCATTGACCTCACCAAATCTGATCTGTATATCTGCTCAGATCATTTCGACCCCATGCAGATGATTAGGAAGAACACTGCTTTAAGAAAGGATGCATTCCCTAAAAAGTATGACGGGCCAGTCCCGCCCCCAGAGATTGATCATCCAAAGATGGAGATTACAGTAGAACCTTCATATGTCAAGGATGAAGATTCTGCAGACATAGATCCATCAACTCTTTTTGACGATGATGAGATCATGCCAGAAGAACTCAGCATGGCAAAATTGGTTAAACTATTTCAAGCTGCCGTTAAAGACAGACCGTCTTCGATAACTCCTTTGGTTACACCAATTGCAACAGAGACCAAGGCATTTTCCAATATTCTAATTGATAGGCAAGAAAGGTACCTAGATATTTACTGCAAAGCCTGCTTGAGACAAGCAGAACTCGTCAACATGTTAGAAGCTAACTGCGAAGGTTTTCCAGTAATTGTGATGTACAAGACTGTGTTAATGACTGATATTACTACATCCCAATCCCCACAGCTGATGTGTCACACTTGCATCGGTCTGCTGTTTCAATGCTTCAAATTTGCCACAATGACTCAAACGTCGTCTGAAGTTCTCCGGGCGGCGAGAGAGCGCTTCAAGTACCTTCCGGCTTTGGATGATGGTACTTTTGATGCCAAAAATATTCCTATCAAGTATAGCGCCAAACCGAACCGCGCCGTTATCGAAGATGATTCTGACGATGACGATAAAGATGACATCAAGCTGTCAGAACTTGTCAAAAAGAGAAAACTGCCGCctaaaaagaaagaaaaagacTCGCCTCCGGCAAAGAAAGGGAGGAGGGTGTCCAGCAGAAGAGCCAGCGAAAAAGCCAAGCAGGCTAGCAAAAAGATTGTTGCAGAGAGTTCAGATTCTGACAACAATGATAACTTTGACAATGATGAAGCGGATCCCGACTTTGAGGAGATGCCTGAGGTGAAAGACGAGACGCCTGAGAATAGTGAGGTTGATGAAAAGGAAGAGAAGGACTCAGATGATGGAGAAGGGGACAACAAGGAGGATGAGGACAACTACTGTATGCTCTGCAGACACCAGTTCACGAATATGGCGAGGCACATGGAAAAAGTGCACCGTGTGGACTGGGAGTCGAAGAGCTGCGAACGCAAGCATAGGAAATCCAAAAAGAAGCGAAAACTAGagaaaatcaaaataaaattcgAAAGGCCAGAAAGTAcagaagaaaaagaagaaaatcaaaaGCCAGGCAAACCGCAATGGTACAAATGTttaaaatgtgacaaaaaatctaaaaatttcaaagAAATGTTCGAACATCTGCAACAAATACACACAAACGATTTAGATTGCATATTTTGCGGTACAGAGTTTGATCACGAAATTCAACTAATGGATCATCTGGGCGAACACGGACGTTGCGTGTATTGTCGCATCCATTTTAAGGCCTTTGACAGTTACAAGGAGTGGCACGAACACGTGACGTTGCCCAAGCATGAACTGGTGTGTGGAATTTGCGAAAAAACGTTTAAAACGAGAAGTGGTAGAGACACCCACCACAAGACACATCTGAAACCCGACGAAGAGATAAAGTGTCCACAGTGCCCTCTAGTTTATGGCTCTAGTACCAATCTAAGAAGGCACATTCGCACATTTCATGAAAAACATTCTTATTTGTGCGCAGATTGTGGACAAGCTTTTACTACTTTACACACCCTCAAACTTCATGCGGCCAAAATTCACCATAAAGGCAGTGGTAAAGAGTCCATACAGTGCGAGATCTGTGGAAAAATATTCGCCGATCGCAAAACTGTACAAGCGCACGAAGCGAAACATTATGGCAAGACGGAGATATGTCAGTATTGTGGGAAATTCTTTGAAAATGTggagatattgaaaaaacaCGTTGAGACTTTAAACCACTACTTGTATCAATGCGAGACCTGTTGGGCCACATTTAAGAAGAAAACCTCATACATCAACCACTTAATGAAGAAGCATAAAATCACATTGCATGACGTAACTGAAATGCACTTGGAAAGAAAAGgtttccAAATGATCAAAACGAAAAGCGACTACAAACGGGCCAAAAATGATGTAAAGGCCATTGCGCGGAGAGGAAGGCCGCGAGGTACTGATCGACCGGACGTCAAAGTAATTAACGGGAAGAGACATTACATTTGTCTCATTTGCAACAAGGTGTTCATGAATGATTCGAATATGCAAAGGCACAAGGATATACATACCGAACGCAAATACAAATGTCCTCACTGCGACAAGAGTTTCGCTCAAAAGCAGGGTGTGAAAAAACACCTTCCCGTTCACAGCGACGAGCGACCGTTCGAGTGCAAAATCTGCGGAAAACGATACAAGGACTCGTGCACTATGTATAAACACAGAAGGGTGCACGGAAAAGGATCTTTGATCGGTATAAATAGTGCCAGTTTAAATCCTAGAAGaaagaaattaatcaaaaacaGATCGCCAGGAACCGAATCGTTTGGTGACAGTCAGCCAGCGTTTCATGGTTCCGACTTTTACGTTTACAATGCGTAA
- Protein Sequence
- MFWRTLEIFRITMENLRNVLEIFRTNLEKLGKYSENSGHVQEKSGNVQEKWPADTSQRIYWQTCLGIQEAPIDLTKSDLYICSDHFDPMQMIRKNTALRKDAFPKKYDGPVPPPEIDHPKMEITVEPSYVKDEDSADIDPSTLFDDDEIMPEELSMAKLVKLFQAAVKDRPSSITPLVTPIATETKAFSNILIDRQERYLDIYCKACLRQAELVNMLEANCEGFPVIVMYKTVLMTDITTSQSPQLMCHTCIGLLFQCFKFATMTQTSSEVLRAARERFKYLPALDDGTFDAKNIPIKYSAKPNRAVIEDDSDDDDKDDIKLSELVKKRKLPPKKKEKDSPPAKKGRRVSSRRASEKAKQASKKIVAESSDSDNNDNFDNDEADPDFEEMPEVKDETPENSEVDEKEEKDSDDGEGDNKEDEDNYCMLCRHQFTNMARHMEKVHRVDWESKSCERKHRKSKKKRKLEKIKIKFERPESTEEKEENQKPGKPQWYKCLKCDKKSKNFKEMFEHLQQIHTNDLDCIFCGTEFDHEIQLMDHLGEHGRCVYCRIHFKAFDSYKEWHEHVTLPKHELVCGICEKTFKTRSGRDTHHKTHLKPDEEIKCPQCPLVYGSSTNLRRHIRTFHEKHSYLCADCGQAFTTLHTLKLHAAKIHHKGSGKESIQCEICGKIFADRKTVQAHEAKHYGKTEICQYCGKFFENVEILKKHVETLNHYLYQCETCWATFKKKTSYINHLMKKHKITLHDVTEMHLERKGFQMIKTKSDYKRAKNDVKAIARRGRPRGTDRPDVKVINGKRHYICLICNKVFMNDSNMQRHKDIHTERKYKCPHCDKSFAQKQGVKKHLPVHSDERPFECKICGKRYKDSCTMYKHRRVHGKGSLIGINSASLNPRRKKLIKNRSPGTESFGDSQPAFHGSDFYVYNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -