Aaen046113.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755043.1:11009429-11018782[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.6 5.6e+02 3.4 1.2 1 23 186 208 186 208 0.90 2 13 0.017 2.1 11.0 0.4 1 23 214 236 214 236 0.97 3 13 0.0007 0.086 15.4 4.6 1 23 242 265 242 265 0.95 4 13 0.00013 0.015 17.7 1.0 1 23 276 299 276 299 0.96 5 13 0.00075 0.092 15.3 2.0 2 23 308 329 307 329 0.98 6 13 0.39 48 6.7 3.0 1 13 336 348 336 352 0.89 7 13 0.13 16 8.2 0.0 2 23 444 465 443 465 0.89 8 13 2.1 2.5e+02 4.4 1.9 1 13 469 481 469 493 0.80 9 13 0.37 46 6.8 0.0 1 23 499 521 499 521 0.88 10 13 8.3e-06 0.001 21.4 0.8 1 23 527 550 527 550 0.97 11 13 4e-06 0.00049 22.4 0.3 1 23 561 584 561 584 0.97 12 13 0.0053 0.65 12.6 3.9 2 23 596 618 595 618 0.97 13 13 1.7e-05 0.0021 20.5 1.5 1 23 625 648 625 648 0.97
Sequence Information
- Coding Sequence
- ATGTCCCCGATAAATACAGAATTGATCAAGCATGTTATTGTTATCTTGCAGATAGATAGTTGTGGGGAAAGTATTATAATAGAAATTACTGAATTATGTCCCGAAGATGAGACTCAAAATCAGGAGATAAAATTTGTAAATCCAGATCGTAGTAGGTATCAAAACTCTGAAAATTCATCAATTATATTAAACATTGATGGTGAATCTGAAatagaagaaaattttaattttggttatAATAGAGCAGACCAGATAGATAAAAATACAGATCTTGAATTTAATTCTCAAACAGTCAATAGTctaaattataattatattgATTCGAAACAATTAGATGATAAGGCGAATTTAAATGATTACAGTCAAACGGATCAGTTTATGATTACCCATAAGGATTTAgaagCACTTGAATCACCTAATAATTCAGAAACCCCGCGAAAAATCTCACTTCCAATAAAACAGGCCGATATTTTACACAAGTGTGACCTATGCAAATACCCAAAATCTTTAACCTTGAAAGACTTGGTTTTGCACAAATTCCAACATCTTCAAAGGTACGAATGTCCTCTTTGCGAGTTCCAGTCATCAAGCAGGCCGTCATGTTTAGTCCACGTAAAGCGACACGAGGGAAAGTTCACTTACTCTTGTGAAATTTGTGGTATGGGATTTTTCAGTCAAACGACGAAAGATAACCATTTAGAAATGCATGAGGGTATACCGAAATACGAGTGCCAATACTGCCATCGAAAATTTACTGTTAGGAAGTATTTACAGGTCCATTTGCAATTCAATCATAAAAAAGAAGTCCTCGGAGTAGAAGAACACTTTCAGTGCAATGTATGTTCTAGAAAATTCTCGTTTGAAAAATCTCTAGTTAGACATTTAAGTGTTATTCATAATATAGGTGAGAATAGACGTAAACAATGTTGCATTTGTAGCAAAATTCTCGCCGACACCTACGGTTTAAACAAACATATGAGAACACACTCCACAACAGAATATACATATTGTTGCGAGACATGTGGAAAGAAATTTTCAGACGAAAGGAAGAATAACGTAAATGAATATACTGTGGTCATCAAAGTTAAAAAGGCTACAAAACAGACTGCAAAGTCTAAAGATAATCAACAATTCATTGAAGCcagtgatgatgatgatgacaGTTCGGTACATGTCGTAGAACAATGTACATTTTGTGGAAAGTTCGTAAATGGCTTAAGTAAACACATTGATAAAGAACACAGATCGAAATGTGAAAAATGTACCGCTTTTGTTCCAGAACCGGATCTTGAAGCTCACCAAGCATTGCACGAATCCGAGAAACGTCAAGAATGCAGCGTTTGTAATCAGGTCTTTATGACTGTGGCAGATCTTGCGATACACAACTACGAACATACTCAAGAATATTCATGCCCCATCTGCGGATTCGTGAGCAAAACTAAAATCAGGGACGCCATAATTAGTCACATCAAAAGACACGAAGGTCAATACAAATATATCTGCGGAGTATGTGGCAAAGGATTTCTAGGCAGAATTCCGATGGAAGCCCATATGGAAGTACATGAAAATCTTCCGAAATATGAATGCGACATCTGTAATAAGACATTCGCAGTAAGAGAGTATCTGAAAACGCATCAAAAACTAAACCATAAAAAGGAGCTCTTCGGAATTGAAGAAATTTTTCAGTGTGACGTCTGCGGAAGAAATTTCTCGTTTGAAGTGTCCCTGAAGCGTCATATACAAGTAGTTCATAGAATCGGAACCACTGATCATTTTAAACCTTCAGAGTGTCACATTTGCAAAAAGATTTTTGCCTGCAGGGCCAACATGAACAAGCACATTAGAAAAATTCATTCCGACGTTAAGGAAGTGTTTCAATGCGATATATGCGGTGCTAATCTTTCAAGATCTTCGCATCTTAAACGCCACAAACAATCTGTTCATAAATTATCAGACGATGTTAACTCAAAACCTACTTATGCAGATCAGACAGAATCAGAttaa
- Protein Sequence
- MSPINTELIKHVIVILQIDSCGESIIIEITELCPEDETQNQEIKFVNPDRSRYQNSENSSIILNIDGESEIEENFNFGYNRADQIDKNTDLEFNSQTVNSLNYNYIDSKQLDDKANLNDYSQTDQFMITHKDLEALESPNNSETPRKISLPIKQADILHKCDLCKYPKSLTLKDLVLHKFQHLQRYECPLCEFQSSSRPSCLVHVKRHEGKFTYSCEICGMGFFSQTTKDNHLEMHEGIPKYECQYCHRKFTVRKYLQVHLQFNHKKEVLGVEEHFQCNVCSRKFSFEKSLVRHLSVIHNIGENRRKQCCICSKILADTYGLNKHMRTHSTTEYTYCCETCGKKFSDERKNNVNEYTVVIKVKKATKQTAKSKDNQQFIEASDDDDDSSVHVVEQCTFCGKFVNGLSKHIDKEHRSKCEKCTAFVPEPDLEAHQALHESEKRQECSVCNQVFMTVADLAIHNYEHTQEYSCPICGFVSKTKIRDAIISHIKRHEGQYKYICGVCGKGFLGRIPMEAHMEVHENLPKYECDICNKTFAVREYLKTHQKLNHKKELFGIEEIFQCDVCGRNFSFEVSLKRHIQVVHRIGTTDHFKPSECHICKKIFACRANMNKHIRKIHSDVKEVFQCDICGANLSRSSHLKRHKQSVHKLSDDVNSKPTYADQTESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -