Aaen062606.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755046.1:4134984-4139705[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.098 12 8.6 2.0 1 23 94 116 94 116 0.97
2 20 0.0092 1.1 11.9 5.3 2 23 126 147 125 147 0.96
3 20 0.48 59 6.4 3.7 3 20 158 175 156 178 0.94
4 20 0.0014 0.17 14.4 2.5 1 23 187 209 187 209 0.98
5 20 2.4 3e+02 4.2 6.2 1 20 218 237 218 240 0.94
6 20 0.0094 1.2 11.8 5.4 1 23 249 271 249 271 0.98
7 20 0.012 1.5 11.5 5.5 1 23 280 302 280 302 0.98
8 20 5.6 6.9e+02 3.1 6.5 3 20 313 330 311 333 0.94
9 20 0.0014 0.17 14.4 2.5 1 23 342 364 342 364 0.98
10 20 2.4 3e+02 4.2 6.2 1 20 373 392 373 395 0.94
11 20 0.00072 0.088 15.3 2.1 1 23 404 426 404 426 0.98
12 20 0.037 4.5 10.0 6.8 1 23 435 457 435 457 0.97
13 20 0.19 23 7.7 8.2 1 20 466 485 466 488 0.95
14 20 0.03 3.7 10.2 2.2 1 23 497 519 497 519 0.98
15 20 0.00012 0.015 17.7 5.9 1 23 528 550 528 550 0.98
16 20 0.73 90 5.9 5.9 1 20 559 578 559 581 0.95
17 20 0.00022 0.026 17.0 3.9 1 23 590 612 590 612 0.98
18 20 0.00017 0.021 17.3 0.5 1 23 621 643 621 643 0.99
19 20 8e-05 0.0098 18.3 2.9 1 23 652 674 652 674 0.98
20 20 6.8e-05 0.0083 18.6 5.4 1 23 683 705 683 705 0.98

Sequence Information

Coding Sequence
atggTCAATCACTCGGTACAATGTCAGATGAAATTATTTGTATGTTTCAGGCAATCAAATAGCAATTTACTTGACTTGCTATCATTCAGTGTAAAATCAGAAGTTGAGGAGTTTGAACTGAAGAGTGAAGAAATCAAGCAGGAAGAGCTCATTCTAGACGACAGCTCATCTGAAACTGAAAAAAATCCACATCAAGTGTCTCATTGCGATTATCAAACCAAATGGAGAGTAAAAATAGACAATGTGTTGCAGCATAAAAGTTTTGACGATATTAATTGCTTCGAATGCTATCATTGTAATTTTCAAACCAAACTTAAGGGTGCCTTGATCACGCATTTGATGCAGCATAGAAGTCGTAATAAAACCAGTGGGATCCAATGCAACTACTGCTACCACAAATTCAAGTTAAAGTCGAGGTTAAAAAGACATCAGTTGCAACATAAAAGTGAgaatgaaattaattggtttggatgctaccaatgtgactacaagacCAAGCTGAAGTCGGATCTTAAAAAACATTTGCTTTGTCATAAAAGTGCAaacgaaatcgattggtttaaatgcaaccagtgtgattacaaggcctATATGAGATATAACCTGGAAAGACATCAGTTGAAACATAAAAGTACAAAcgaaattaattggtttagaTGCCACCAATGTAACTACAAGGCCAAGCTAAAGTCGCAAATTAAAAGACATTTGCTTTGCCATAAAAGTGCAaacgaaatcgattggtttaaatgcaatcacTGTGATTACAAATCCAAATGGAAGTCCAGTTTAAAAAGACACCAGTTACAACACAAAAATGCAAATGAAGTCGTTTtgtttaaatgcaaccactgtAACTACAAGGCCAATAGCAAGTTCAGTTTAAAGACTcaccagttacaacataaaagtgagaatgaaattaattggtttggATGCCACCAATGTGACCACAAGACCAAGCTGAAGTGGGATCTTAAAAAACATTTGCTTTGTCATAAAAGTGCAaacgaaatcgattggtttaaatgcaaccagtgtgattacaaggcctATATGAGATATAACCTGGAAAGACATCAGTTGAAACATAAAAGTACAAAcgaaattaattggtttagaTGCCACCAATGTAACTACAAGGCCAAGCTAAAGTCGCAAATTAAAAGACATTTGCTTTGCCATAAAAGTGCAaacgaaatcgattggtttgaatgcaaccagtgtgattacaaagcCTATAAGAGATATAACCTGGAAAGACATCAGTTGAAACATAAAAGTACAAAcgaaattaattggtttaaatgcaaccactgtAACTACAAGGCCAATAGAAAGTTCAGTTTAAAGACTCACCAGTTTCAACATAAAAGTGAGAAcgaaattaattggtttagaTGCCACCAATGTGACCACAAGACCAAGCTGAAGTCGGATCTTAAAAAACATTTGCTTTGTCATAAAAGTGCAaacgaaatcgattggtttaaatgcaaccagtgtgactacaaAGCCAAATGGAAGTCCAGTTTAAAAACACATCAGTTACAACACAAAAATGCAAATGAAGTCATTTTGTTTGAATGCAGTCACTGTGACTACAAGACCAAGAGAAAGACTAATTTAAAGAATCACCAGTTAAAACATATAAGTGAAAAcgaaattaattggtttagaTGCCACCTGTGTGACCACAAGGCCAAGCTGAAGTCGGATCTTAAAACACATTTGATTTGTCACAAAAGCGCAAgcgaaatcgattggtttaaatgcgatCACTGCGACTACAAAGCCAAACGGAAGGccaatttaaaaacacatcagTTACAACACAAAAATGCAAATGAAGTAGATTGGTTTCAATGCAACCTATGCGGCTACAAGGCCATTTTAAAGTCCAATTTAAAGATTCACCAATTGACACATAAAAGTGGAAAcgaaattaattggtttaaatgcaaccagtgtgattacaaggccaatAGGAAATATAACCTGGAGAAACATCAGTTGAAACATAAAAGTCAaaatgaaatcaattggtttacATGCAACCACTGTGAGTACAGGACCAAACGAAAATCGAATCTGAAAATTCATCAATTGCGACATTAA
Protein Sequence
MVNHSVQCQMKLFVCFRQSNSNLLDLLSFSVKSEVEEFELKSEEIKQEELILDDSSSETEKNPHQVSHCDYQTKWRVKIDNVLQHKSFDDINCFECYHCNFQTKLKGALITHLMQHRSRNKTSGIQCNYCYHKFKLKSRLKRHQLQHKSENEINWFGCYQCDYKTKLKSDLKKHLLCHKSANEIDWFKCNQCDYKAYMRYNLERHQLKHKSTNEINWFRCHQCNYKAKLKSQIKRHLLCHKSANEIDWFKCNHCDYKSKWKSSLKRHQLQHKNANEVVLFKCNHCNYKANSKFSLKTHQLQHKSENEINWFGCHQCDHKTKLKWDLKKHLLCHKSANEIDWFKCNQCDYKAYMRYNLERHQLKHKSTNEINWFRCHQCNYKAKLKSQIKRHLLCHKSANEIDWFECNQCDYKAYKRYNLERHQLKHKSTNEINWFKCNHCNYKANRKFSLKTHQFQHKSENEINWFRCHQCDHKTKLKSDLKKHLLCHKSANEIDWFKCNQCDYKAKWKSSLKTHQLQHKNANEVILFECSHCDYKTKRKTNLKNHQLKHISENEINWFRCHLCDHKAKLKSDLKTHLICHKSASEIDWFKCDHCDYKAKRKANLKTHQLQHKNANEVDWFQCNLCGYKAILKSNLKIHQLTHKSGNEINWFKCNQCDYKANRKYNLEKHQLKHKSQNEINWFTCNHCEYRTKRKSNLKIHQLRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-