Aaen002587.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755038.1:21746709-21768304[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.92 1.1e+02 5.6 6.5 1 23 158 180 158 180 0.96 2 16 0.02 2.5 10.8 3.0 1 23 189 211 189 211 0.97 3 16 0.00017 0.02 17.3 1.4 1 23 220 242 220 242 0.97 4 16 0.0018 0.21 14.1 3.4 1 23 251 273 251 273 0.96 5 16 0.02 2.5 10.8 1.2 1 23 430 452 430 452 0.97 6 16 0.00096 0.12 14.9 3.3 1 23 461 483 461 483 0.98 7 16 7.2e-05 0.0088 18.5 0.7 1 23 492 515 492 515 0.95 8 16 0.016 1.9 11.1 1.6 1 21 524 544 524 545 0.95 9 16 0.005 0.61 12.7 1.2 1 23 555 578 555 578 0.95 10 16 5.5e-05 0.0067 18.9 2.0 1 23 587 610 587 610 0.97 11 16 0.00018 0.022 17.2 0.7 2 23 620 642 619 642 0.94 12 16 0.12 14 8.4 2.8 1 23 651 673 651 673 0.96 13 16 0.00059 0.073 15.6 3.6 1 20 682 701 682 705 0.95 14 16 0.073 9 9.0 2.3 1 23 714 736 714 736 0.96 15 16 0.0053 0.65 12.6 2.6 1 23 745 767 745 767 0.96 16 16 0.027 3.3 10.4 5.2 2 23 777 798 776 798 0.97
Sequence Information
- Coding Sequence
- ATGTACCGTCGTAAGCTAGATAGATGTGACGGAGACGTACGGAACGataaaattaaaaaagaaatatctGCAGATAATGTTGGACCAGGTTGCAGTACCTTAAAAGAAGAAGTGGCAGCTGAAAGCAATTCCAAGAAAATTGAACATAAACTCCTTGAAGACAGTGTTAGTTTTGGCATGTTGGACACTTATTTACCTGACCCTTCATCATCCAGCATAAAATGGGAACCTGAAGACTTTGAGCTAAACACTGAGGAGATAAAGCAGGAGTTGATTTTGGATGAGAGCTCATCTAACATGTTGGAAACTCATTTAACTGGCCCCTCAATATCCAGCATACAATGGGAACCTGATGACTTTAGGCTAAAGACTGAAGAATTAAAGGAGGAGTTGATCTTGGATAACAGCTTATCTGAattGGATATTCCAGATAGTCACAGAAACAAAAGAACGAAGGAAGAAATTATTTGGTTCAAATgcgaccagtgtgattacaaggccaaacggAAGACCCATTTAAATTGCCATTTGCTGCAGCACAAAAATGTAGATGAAATCATTTGGtataaatgcaatcagtgtgattacaaggccaaacagaAGTCCTATTTGCACGGACATTGGCTGCAACACAAAACTGCAGATGAAATCActtggtttaaatgcgaccagtgtAATTACATGGCCAAACGGAAGTCCAATTTGAACGAACATTTGCTGCAGCACAAAAGTGCAGATGAAATCActtggtttaaatgcaaccagtgtgattacatGACCAAACGGAAGTTCAATTTGAACGAACATTTTCTGCAGCACAAAAATGcagatgaaatcaattggtttaaatgcgaccagtgtGATTACCAAGataaaattaaaaaagaaatatctGTAGATAATGTTGGACCAGGTTGCAGCACATTGGAAGAAGAAGTGGCAGCTGAAAGCAATTCCAAGAAAATTGAAAATGAATTCCTTGAAGACAGTGTTAGTTTTGGCCCATTGGAAAGTAATTTACCTGGCCCTTCATCAGCCAGCATAAAATGGGAACCTGCAGATTTTGAGCTAAAGACTGAGGAGATAAAGCAGGAGTTGATGTTGGATGACAGCTTATCTGAcaTGTTGAACACTCATTTTTATGGCCCTTCCTCATCCAACATAAAATGGGAACCTGAAGACTTTGAGCTAAAGAGTGAGGAGATAAAGCAGGAGTTGGTGTTGGATGACACCTTATCTAAacCGGATATTCCAGATGGTCAAAGAAAGGAAAGGAAGAAGGATTGGTTTGAATGCAAacagtgtgattacaaggccaagTTGAAGGCCTATTTGAAGAGCCATTTGCTGCAACACAAAAGTGCaaataaaatcaattggtttaaatgtgaCCAGTGTGAATATAAGGCCAAACGAAAGTCCCACTTGATCAGTCATTTGCTGCGGCACAAAACTTCAGATGAAATTCATTGGTTCAAATGCGACCAGTGTGACTACAACGCCATCCGCCAGTCCAATTTGAAGAGACATATTTTGTGGAAGCACAAAGCTGCagatgaaattaattggtttaaatgttaccaatgtgattacaagacCAAAGAGAAGTCTAAATTAAAGGTACATTTGTTGCAGTACAAAAGTGCAGAGGAAATCACTTGGTTTAGATGcaaccagtgtgactacaaggaCATACGGAAGTCCAATTTGAAGACACATATTTTGTGGAACCACAAAAGTGCAGATGAActcaattggtttaaatgtaacgaatgtgattacaaggccaaacgTAATTTTAATTTGCAGAGACATATCTTATCATATCACAAAAGTACAGATGAAATTCATTGGCTAAAATGCgaccagtgtgactacaaggccatACGCAAGTCCAATTTGAAGAGACATATTTTGTGGAAGCACAAAACTGCcgatgaaatcaattggtttaaatgttaccaatgtgattacaaggccaaagAGAAGTCTAAATTAAAGGTACATTTCTTGCAGCACAAAAGTGCAGAGGAAATCAATTGGTataaatgcaaccagtgtgactacaaggccgCACGCAAGTCCAATTTGAAGAGACATATTTTGTGTAAGCACAAAAGTTCAGATGAActcaattggtttaaatgtgaCAAATGTGATTATAAGGCCAAAGAGAAATCTAGATTAAAGGTACATTTCCTGCAGCACAAAAGTGcagatgaaatcaattggtttaaatgcgaccaatgtgattacaaggccaaacagaAGTCTAAATTAAAGGTACATTTCCTGCAGCACAAAAGTGCAGATGAAATCAGTTGGTTAAAATGCGACCACTGTAATTTCAAGACCAAGGAGAATCGTTATTTAAAGAGACATTTGCTGAAGCACAAAAACGAAGATGCAATTAAATAG
- Protein Sequence
- MYRRKLDRCDGDVRNDKIKKEISADNVGPGCSTLKEEVAAESNSKKIEHKLLEDSVSFGMLDTYLPDPSSSSIKWEPEDFELNTEEIKQELILDESSSNMLETHLTGPSISSIQWEPDDFRLKTEELKEELILDNSLSELDIPDSHRNKRTKEEIIWFKCDQCDYKAKRKTHLNCHLLQHKNVDEIIWYKCNQCDYKAKQKSYLHGHWLQHKTADEITWFKCDQCNYMAKRKSNLNEHLLQHKSADEITWFKCNQCDYMTKRKFNLNEHFLQHKNADEINWFKCDQCDYQDKIKKEISVDNVGPGCSTLEEEVAAESNSKKIENEFLEDSVSFGPLESNLPGPSSASIKWEPADFELKTEEIKQELMLDDSLSDMLNTHFYGPSSSNIKWEPEDFELKSEEIKQELVLDDTLSKPDIPDGQRKERKKDWFECKQCDYKAKLKAYLKSHLLQHKSANKINWFKCDQCEYKAKRKSHLISHLLRHKTSDEIHWFKCDQCDYNAIRQSNLKRHILWKHKAADEINWFKCYQCDYKTKEKSKLKVHLLQYKSAEEITWFRCNQCDYKDIRKSNLKTHILWNHKSADELNWFKCNECDYKAKRNFNLQRHILSYHKSTDEIHWLKCDQCDYKAIRKSNLKRHILWKHKTADEINWFKCYQCDYKAKEKSKLKVHFLQHKSAEEINWYKCNQCDYKAARKSNLKRHILCKHKSSDELNWFKCDKCDYKAKEKSRLKVHFLQHKSADEINWFKCDQCDYKAKQKSKLKVHFLQHKSADEISWLKCDHCNFKTKENRYLKRHLLKHKNEDAIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -