Basic Information

Insect: Aspidapion aeneum
Gene Symbol: -
Assembly: GCA_963576565.1
Location: OY755046.1:58700102-58702386[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0029 0.36 13.4 2.3 2 23 60 82 59 82 0.95

2 11 0.00011 0.013 18.0 0.9 1 23 187 210 187 210 0.94

3 11 0.19 23 7.7 2.6 1 23 256 279 256 279 0.94

4 11 0.0028 0.34 13.5 0.6 1 23 285 308 285 308 0.96

5 11 2.8e-05 0.0035 19.8 1.2 1 23 313 336 313 336 0.97

6 11 0.0024 0.3 13.7 1.3 1 23 342 365 342 365 0.95

7 11 8.1e-05 0.0099 18.3 1.4 1 23 373 395 373 395 0.98

8 11 3.5e-05 0.0042 19.5 6.1 1 23 401 423 401 423 0.97

9 11 0.0005 0.062 15.8 0.5 1 23 432 456 432 456 0.95

10 11 0.00017 0.021 17.3 4.0 1 23 471 493 471 493 0.97

11 11 1.4e-05 0.0017 20.7 2.6 1 23 499 522 499 522 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0029	0.36	13.4	2.3	2	23	60	82	59	82	0.95
2	11	0.00011	0.013	18.0	0.9	1	23	187	210	187	210	0.94
3	11	0.19	23	7.7	2.6	1	23	256	279	256	279	0.94
4	11	0.0028	0.34	13.5	0.6	1	23	285	308	285	308	0.96
5	11	2.8e-05	0.0035	19.8	1.2	1	23	313	336	313	336	0.97
6	11	0.0024	0.3	13.7	1.3	1	23	342	365	342	365	0.95
7	11	8.1e-05	0.0099	18.3	1.4	1	23	373	395	373	395	0.98
8	11	3.5e-05	0.0042	19.5	6.1	1	23	401	423	401	423	0.97
9	11	0.0005	0.062	15.8	0.5	1	23	432	456	432	456	0.95
10	11	0.00017	0.021	17.3	4.0	1	23	471	493	471	493	0.97
11	11	1.4e-05	0.0017	20.7	2.6	1	23	499	522	499	522	0.94

Sequence Information

Coding Sequence: atGCTTTCAGTTTGTACTCCACTTCAGCACTGGTCTACAGACTTCCAGATCTGTCAGAATTGCCTTCCCAAACTCCAAGAAGCCCATACTTTCATCAAACAATGCATAAACAGTGAAGAGTTGAGGGAAAACCTTATTCAAGAGTTAGAACTGGATGTTAAAGTGGACAATAAATGGGTATGTCAGTACTGTAATGAGATTTGTGCAACAAAGCAATCTCTAAATCGGCATAAGCTAAGGAAACATAAAGCACAACTTGAGCTGCAAGAAATATTCAAGGAAAAGACAAAAcaagaaacaaataaaacaGATGACAACCAGGTCACAGATGAAAACAAACAGAAATTTGAAGATGAATTTGCAGAGAATGACTGTCATAGTCCTGACACTTTAATAAAAGAAGAACTAAATGAAATAAAACTTGAAGAAAAAGATTATGAATGCAGAAGTAGTGATTGTGGTGATTTATTTGCCAACCAAGGTCCAACAGAAATAAAGCAAGAAAATCCTAAAACTAAAAAGTCAACAAATTCATTAAAAACTGATAGAACGAAAAGACATTCCTGTGAACAATGTGGTGAATCTTTTACCACCTTGGCCTCTGTTAGACGCCATATTGGTAGAAAACATACTAAATCACCAAATGATCAATTAGAACCCAACAAACCTAGTGACAATAGTACATTGAGCcaagaaaatattttggaaGATATAAAACCAAGTTTAAATAAACCTACTGATAAATTAATGTCTATAAATGGACGCTTTAAGTGTCCACACTGTGAGGAATTATTTCGTTGGAAAAGGGAACTTAGTACTCACAAATATATGTCTCATCTGGCTGAAAGACCTTTTCAATGCAAAAACTGTATAGCACGGTTTAGTAGAAAGGCCAGTCTTATGATACACTTAAAAGAGATGCATAAAAACAAAGTATTTGTGTGTGAAAATTGTAATAAAAGGTTTGATAGTCAAgcaaaattgacataccataTAAGTACGACACATTCAAACAAACGAGAATATCAGTGTGAGCTGTgtggaaaaaattataacacaAAACAAACTCTACTTTTTCACAAACGGGTAGTTCACACTGATCCATCAAAATCTCCTCATGTCTGCAACATTTGCAGTAAAAGATTTGCTTTAAAGAATGGTTTGGAAAACCACATAAAACGGCACATGGGAATCAAAGAATTTATCTGCCACATTTGCTCAAAATGCTTTATTGACAACCACGAtttaaaaaagcatttaatttcACATCAAGCTCTCGAAGAACGCCCTTCATTTTCTTGTACTCTTTGTCCTGATAAAAGTTTTAGAACCAAAGACGGGCTTAAAGCGCATTTAGCTCGAAGACATAACATTGGTAAGATTTATCCTGAATATAGAAAGAAAAATAGATATTCTTGCACCTTGTGCCCAAAAGGTTTTTCTACAAAAGAAAAACTCCAAACTCATTTTTGTTCCCATACAGGAGACCGACCGTATCCTTGCGAACATTGCGGCAAAGGATTTACAGATAAATATAACAGAAAGAAGCATATAACAGAAAAACATCAGATGGTACAAGACCAGTTACTAGAAGTTGCTCAAGAAGTAGCAGTATTCGGTAAAAATCAGTTTGAAGATGATGATCCAGTCATTTCTTATGTTGATAGTAAAGAAAATGGTGGTTTCTAA
Protein Sequence: MLSVCTPLQHWSTDFQICQNCLPKLQEAHTFIKQCINSEELRENLIQELELDVKVDNKWVCQYCNEICATKQSLNRHKLRKHKAQLELQEIFKEKTKQETNKTDDNQVTDENKQKFEDEFAENDCHSPDTLIKEELNEIKLEEKDYECRSSDCGDLFANQGPTEIKQENPKTKKSTNSLKTDRTKRHSCEQCGESFTTLASVRRHIGRKHTKSPNDQLEPNKPSDNSTLSQENILEDIKPSLNKPTDKLMSINGRFKCPHCEELFRWKRELSTHKYMSHLAERPFQCKNCIARFSRKASLMIHLKEMHKNKVFVCENCNKRFDSQAKLTYHISTTHSNKREYQCELCGKNYNTKQTLLFHKRVVHTDPSKSPHVCNICSKRFALKNGLENHIKRHMGIKEFICHICSKCFIDNHDLKKHLISHQALEERPSFSCTLCPDKSFRTKDGLKAHLARRHNIGKIYPEYRKKNRYSCTLCPKGFSTKEKLQTHFCSHTGDRPYPCEHCGKGFTDKYNRKKHITEKHQMVQDQLLEVAQEVAVFGKNQFEDDDPVISYVDSKENGGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -