Aaen002576.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755038.1:21557870-21565075[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.013 1.6 11.4 2.0 1 23 126 148 126 148 0.97
2 26 1.3 1.6e+02 5.1 4.0 1 19 157 175 157 179 0.85
3 26 0.0044 0.54 12.9 2.8 1 23 188 210 188 210 0.98
4 26 0.00068 0.083 15.4 1.1 2 23 220 241 219 241 0.96
5 26 0.00031 0.038 16.5 0.9 1 23 274 296 274 296 0.97
6 26 0.019 2.4 10.8 2.3 1 23 305 327 305 327 0.98
7 26 0.14 17 8.2 6.7 1 23 336 358 336 358 0.98
8 26 0.0032 0.4 13.3 2.0 1 23 367 389 367 389 0.98
9 26 0.052 6.4 9.5 2.6 1 23 398 420 398 420 0.98
10 26 0.019 2.4 10.8 2.3 1 23 429 451 429 451 0.98
11 26 0.92 1.1e+02 5.6 4.7 1 23 460 482 460 482 0.97
12 26 0.0013 0.16 14.5 2.9 1 23 491 513 491 513 0.98
13 26 1.5 1.8e+02 4.9 6.0 1 23 522 544 522 544 0.90
14 26 0.0013 0.16 14.5 2.9 1 23 553 575 553 575 0.98
15 26 0.00068 0.083 15.4 1.1 2 23 585 606 584 606 0.96
16 26 0.079 9.7 8.9 3.6 1 23 639 661 639 661 0.98
17 26 0.00031 0.038 16.5 0.9 1 23 670 692 670 692 0.97
18 26 0.097 12 8.6 2.0 1 23 701 723 701 723 0.97
19 26 0.14 17 8.2 6.7 1 23 732 754 732 754 0.98
20 26 0.0051 0.62 12.7 1.6 1 23 763 785 763 785 0.98
21 26 0.019 2.4 10.8 2.3 1 23 794 816 794 816 0.98
22 26 0.019 2.4 10.8 2.3 1 23 825 847 825 847 0.98
23 26 0.21 26 7.6 3.3 1 23 856 878 856 878 0.97
24 26 0.051 6.3 9.5 6.9 1 23 887 909 887 909 0.99
25 26 0.0056 0.69 12.5 3.2 1 23 918 940 918 940 0.98
26 26 7.6e-05 0.0093 18.4 1.9 1 23 949 971 949 971 0.97

Sequence Information

Coding Sequence
ATGTTGGACACTGATTTTTCTGGCCCTTCATCAGCCACCATCAAATGGGAACCTGAAGACTTTGAGCTAAAAAGTGAGGAGATAAAGCAGGAGTTAATGTTGCATGACTGCACATCTAACATGTTGGATACTAATTTACCTGGCCCTTCATCGTCCTGCATAAAATGGGAACCTGAAGACATTGAGTTAGAAACTGATGATATAAAGCAGGAGGAGTTGATGGTGGATGACAGCGTATCTGATCATTTGCTGCAACACAAAAGTGCAGATGAAATCAATTGGCTTGAATGCGACCAATGTGATTACAAAAGCAGATGGAAGTTACGATTACAGATGCATGTGCTACAGCACACCAGTGCATATGAActcaattggtttaaatgcgaccagtgtAATTTCAAGGGTAAACGGAAGTCCAGTTTGGACAGTCATTTGTTGCAACACAAAAGTGCAGatgaaataaattggtttacatgcgaccagtgtgattataaagccAAACGGAAGTCCAATTTGGACTGTCATTTCCTGCAACACAAAAGTGCAGacgaaatcaattggtttaaatgcgaccagtgtGAGTATAAGGCCAAACAGAAGCCCCATTTGAACAGGCATTTGCTACAGCACAAAAGTTTagatgaaatcaattggttaaaatgcgaccagtgtgattacaaggccaaagATAAGTCCTATTTGAACAGACATCTCCTGCAGCACAAAAGTGCAGATGAAATCAGTTGGTTTGATTACAATTCCAAGTCCCCGTTGGACAGTCATTTGCTGCAACACAAACATGCAGATGAAATCAATTGTtttaaatgcgaccagtgtgattacaaagcCAATCGAAAGGCCAATTTGAACAGGCATGTGCTACAGCACAAAAGTTTagatgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaagAGAAGTCCAAATTAAAGATACATTTCCTGCGGCACAAAAGTGcagatgaaatcaattggtataaatgcaaccactgtgaTTACAAAGCCAAACATAAGTTTCAGTTGAAACCACATTTAATGAAGCACAAAAGTGCAGATGAAATCAAGTGGTTTGAATGTGACCGGTGTAATTTCAAGGCCAAACAGAAGGATTATTTAAATAGACATTTGCTGCGGCACAAACGTGCAGatgaaataaattattttaaatgcgaccagtgtgattacaaggctAAAGAAAAGTACAAATTAAAGATACATTTCCTGCGGCACAAAAGTGCtgatgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaagAGAAGTCTAAATTAAAGATACATTTCCTGCGGCACAAAAGTGcagatgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaagAGAAGTGCAAATTAAAGATACATTTCCTGCGGCACAAAAGTGCAGacgaaatcaattggtttaaatgcgaccagtgtgattacaaggctAAACAGAAGCCCCATTTGAACAGGCATTTGCTGCAACACAAAAGTGCAGatgaaataaattggtttacatgcgaccagtgtgattataaagccAAACGGAAGTCCAATTTGGAATGTCATTTCCTGCACCACAAAAGTGCAGacgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaacagaAGCCCCATTTGAACAGGCATTTGCTACAGCACAAAAGTTTagatgaaatcaattggttaaaatgcgaccagtgtgattacaaggccaaagATAAGTCCTATTTGAACAGACATCTCCTGCAGCACAAAAGTGCAGATGAAATCAGTTGGTTTGATTACAATTCCAAGTCCCCGTTGGACAGTCATTTGCTGCATCGCAAAAGTACAGATGAAAACAAGTGGTTTAAATGTGACCGGTGTAATTTCAAGTCCATCCACGAGCCTTATTTAAAGAGACATTTGCTTCGGCACAAACATGCAGATGAAATCAATTGTtttaaatgcgaccagtgtgattacaaagcCAATCGAAAGGCCAATTTGAACAGGCATGTGCTACAGCACAAAAGTTTagatgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaagAGACGTCCAAATTAAAGATACATTTCCTGCGGCACGAAAGTGcagatgaaatcaattggtataaatgcaaccactgtgaTTACAAAGCCAAACATAAGTTTCAGTTGAAACCACATTTAATGAAGCACAAAAGTGCAGATGAAATTAAGTGGTTTGAATGTGACCGGTGTAATTTCAAGGCCAACCAGAAGGATTATTTAAATAGACATTTGCTGCGGCACAAACGTGCAGATGaaatcaattattttaaatgcgaccagtgtgattacaaggctAAAGAGAAGTCCAAATTAAAGATACATTTCCTGCGGCACAAAAGTGCtgatgaaatcaattggtttaaatgcgaccagtgtgattacaaggccaaagAGAAGTCCAAATTAAAGATACATTTCCTGCGGCACAAAAGTGcagatgaaatcaattggtttatatgcaaccagtgtgattacaaagcCAAACATAAATTTCAGTTAAAACCACATTTAATGAAGCACAAAAGTAcagatgaaatcaattggtATAAATGCGACCACTGTGATTACAAAGCTAAACATAAGTTTCAGGTGAAACAACATTTAATGAAGCACAAAAGTGCAGATGAAATAAagtggtttaaatgtaaccagtgtaATTTCAAGGCCAACCAAAAGAACTATTTAAATAGACATTTGCTGCGGCACAAACGTGCAGATGaaatcaattattttaaatgcgaccagtgtgattacaaagcCAAACGGAAGTCCAATTTGAACAGGCATGTGCTACAGCACAAAAGTTTAGATGAAATCAACTAG
Protein Sequence
MLDTDFSGPSSATIKWEPEDFELKSEEIKQELMLHDCTSNMLDTNLPGPSSSCIKWEPEDIELETDDIKQEELMVDDSVSDHLLQHKSADEINWLECDQCDYKSRWKLRLQMHVLQHTSAYELNWFKCDQCNFKGKRKSSLDSHLLQHKSADEINWFTCDQCDYKAKRKSNLDCHFLQHKSADEINWFKCDQCEYKAKQKPHLNRHLLQHKSLDEINWLKCDQCDYKAKDKSYLNRHLLQHKSADEISWFDYNSKSPLDSHLLQHKHADEINCFKCDQCDYKANRKANLNRHVLQHKSLDEINWFKCDQCDYKAKEKSKLKIHFLRHKSADEINWYKCNHCDYKAKHKFQLKPHLMKHKSADEIKWFECDRCNFKAKQKDYLNRHLLRHKRADEINYFKCDQCDYKAKEKYKLKIHFLRHKSADEINWFKCDQCDYKAKEKSKLKIHFLRHKSADEINWFKCDQCDYKAKEKCKLKIHFLRHKSADEINWFKCDQCDYKAKQKPHLNRHLLQHKSADEINWFTCDQCDYKAKRKSNLECHFLHHKSADEINWFKCDQCDYKAKQKPHLNRHLLQHKSLDEINWLKCDQCDYKAKDKSYLNRHLLQHKSADEISWFDYNSKSPLDSHLLHRKSTDENKWFKCDRCNFKSIHEPYLKRHLLRHKHADEINCFKCDQCDYKANRKANLNRHVLQHKSLDEINWFKCDQCDYKAKETSKLKIHFLRHESADEINWYKCNHCDYKAKHKFQLKPHLMKHKSADEIKWFECDRCNFKANQKDYLNRHLLRHKRADEINYFKCDQCDYKAKEKSKLKIHFLRHKSADEINWFKCDQCDYKAKEKSKLKIHFLRHKSADEINWFICNQCDYKAKHKFQLKPHLMKHKSTDEINWYKCDHCDYKAKHKFQVKQHLMKHKSADEIKWFKCNQCNFKANQKNYLNRHLLRHKRADEINYFKCDQCDYKAKRKSNLNRHVLQHKSLDEIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-