Aaen046120.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755043.1:11058510-11068197[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.7 4.5e+02 3.7 0.6 5 23 24 43 23 43 0.85 2 19 0.0051 0.63 12.6 0.4 2 23 143 164 142 164 0.96 3 19 0.0018 0.22 14.1 1.4 1 23 199 221 199 221 0.97 4 19 0.0017 0.21 14.2 0.9 1 23 227 250 227 250 0.94 5 19 0.15 19 8.0 0.5 2 19 260 277 259 279 0.94 6 19 0.018 2.2 11.0 5.4 1 23 293 315 293 315 0.96 7 19 6.6e-07 8e-05 24.9 0.2 1 23 321 343 321 343 0.98 8 19 6.9e-05 0.0085 18.5 3.5 1 23 349 371 349 371 0.99 9 19 0.00031 0.038 16.5 0.7 2 23 387 408 386 408 0.96 10 19 1.1 1.3e+02 5.4 0.1 1 23 428 450 428 450 0.94 11 19 0.82 1e+02 5.7 0.6 2 23 455 476 454 476 0.94 12 19 0.0071 0.87 12.2 2.5 2 23 483 505 482 505 0.96 13 19 0.22 27 7.5 1.7 1 23 511 535 511 535 0.93 14 19 0.0056 0.69 12.5 1.9 1 23 541 564 541 564 0.90 15 19 0.031 3.9 10.2 2.2 3 21 575 593 573 594 0.92 16 19 0.031 3.8 10.2 3.6 3 23 610 630 608 630 0.95 17 19 4.4e-06 0.00054 22.3 1.2 1 23 636 658 636 658 0.98 18 19 5.5e-07 6.7e-05 25.2 1.3 1 23 664 686 664 686 0.99 19 19 0.00034 0.042 16.4 0.5 1 21 692 712 692 713 0.95
Sequence Information
- Coding Sequence
- atgaatcATTTAAAGTTGTTTGAAGAAGATCAGAATATTCATACCGGCCAACGACCTTTTAATGGTCTGGTTTGTAAGAAAGAGTTTACCTTAACAAGATACTTACTAATACATCATATGGGAAATCATCAATTTGGTACCAGAGCACAAAAAGTGAAATCCATTGCGCTGGCTGCAATGGATACCTTTATAAACCTCAGGCATTGgAACATCGGAAGAAAATTCTTACGATTAAAAACTGTCAAGAAAAAAGCTTTTAGGAAAGctaagaaaaattttaaaattcaaaataacgTAAAATATCAGATAGAAATTCCCAATGATGAACTCAACGATCTTCAGAACTTATACATCTTAAACATTTCAACAGAATCTGAAGAAAACGCACATTCCaaagattattttaaaacaaattcaGAATCTCTGAGTTGTGAGTTTTGCCAAGAAGTATTTTCCGATCTTTACAAGCTTGGCGTGCATTCTAGAAAACATTCTACGAAAGATTTAATTAAGTGTCCGCTTTGTGCGTACACTATTAAAAAGGCCTGCAACTTCAAGTTCCATTTACATACTCATCATCTTAAAGTATTTCCATTCACCTGTGAAATCTGTGATAAAGGCTTTCACTCTCAAGTTCGCCTAACTGAACATGGTTACACCCATACTGGAGAAAGACCTTATTCGTGTGTAGTTTGTAGTCGAGGATTTACATCAGACAAACATCTATTGAGACACCAGTTGGATGCTCATCAAGTTGGGATTGAAGGTCTTAGAACCAGTTGTCTGTTTTGcaatagatatttttataaaccTACCGCTTTGCAAAAACATGAAGACGGTTGTTCTAAGAGCAAGAAACGAAAAAAGGATAAAAAGTATTTGTGCACGTATTGCGGTCATGCTTGCGAAAAGCAGCATTTGCTTGTGGAGCACACAAGAACTCACACAGGAGAGCATCCCTATGTATGTCCCCGATGTGGAAAAGGCTTCGCTAGGAAGGACTACCTGAAAGTTCACGAACGTGTTCACAATGGAGAAAAACCGTACTCTTGTGAATACTGCGGAAAACGTTTTGCTCAACACACACCTTTTAGAGTTCATAAAAGAACGCACACTGGTGAAAGACCGAAATCTCTGAAGTGTACTCAAAAACATATTGTATGTAAAACATGTTCTGAATCTTTTATTAGTGAAAAGCAGCTAAAAGAACATCAAAAGCTTCACAATTCACTTCAGCTTGATGAATCTCCTTCCTATAAATATGATGATCTACAGGATCTTTACATATGCAATGTTTGTTCTGCTGAATTTCAAACTCGAAATGAAGCAGATGTTCATTTAGATTCGCATATTAGAAAGTTGCAATGTAAAAACTGTTCTGAAAAATTTCTAAACTATTACGAATTAGGAGTTCATTTTCTAATGCATGACGGAAAAGGAAAGGTGCAATGTCCTTTGTGTTCTTACGTTACCAACAAGAAACATAATTTTAAGACACATCTCGACACTCAACATCTAAAACGATTTAGTTTTTACTGTAAATTTGTCGGGTGCGGTAAAGGATTTAACCAACATCTTAGGTTGGTTGAGCATGAGTACAGACATACAAATAAACGCCCCTTTGTATGTATCGTATGCACCAAAGGATTCACTTCAAATAGACATCTGTTGCGGCATCAAATTTTTTCTCATCAGGTTGGTTTTGAAGGTCAAAAAAGTTGTTGCAGTGTTTGCAATAGATACTTTTATCACCCAAATGCTTTAGTAAAGCATCAAAGCAGATGTTTCGCAAAGAAACCTGTAGAAGTCAAACAAAAGAAACACTTATGTGTATATTGTGGTCACGCGTTTAGACATCAAAACGTGATGGTTGAGCATATAAGATCACACACAGGCGAACATCCCTTTGTCTGTTCTCAATGTGGCAAAAGTTTTACAAAGAAAATTTATCTAAAAGATCACGAAAGAATCCACACTGGTGAAAAACCGTACTCCTGTGAATATTGTGGCAAAAGGTTTGCTCGTCCCACCGCTCTCCGTTATCACAAAAGAACCCATACTGGTGAGCGACCTTATCGTTGTGCTTTATGTAATAAAGGATTTACAACAAATCAAGCGTTGAAGGTTCACAAGAAAAATTGCAATTAG
- Protein Sequence
- MNHLKLFEEDQNIHTGQRPFNGLVCKKEFTLTRYLLIHHMGNHQFGTRAQKVKSIALAAMDTFINLRHWNIGRKFLRLKTVKKKAFRKAKKNFKIQNNVKYQIEIPNDELNDLQNLYILNISTESEENAHSKDYFKTNSESLSCEFCQEVFSDLYKLGVHSRKHSTKDLIKCPLCAYTIKKACNFKFHLHTHHLKVFPFTCEICDKGFHSQVRLTEHGYTHTGERPYSCVVCSRGFTSDKHLLRHQLDAHQVGIEGLRTSCLFCNRYFYKPTALQKHEDGCSKSKKRKKDKKYLCTYCGHACEKQHLLVEHTRTHTGEHPYVCPRCGKGFARKDYLKVHERVHNGEKPYSCEYCGKRFAQHTPFRVHKRTHTGERPKSLKCTQKHIVCKTCSESFISEKQLKEHQKLHNSLQLDESPSYKYDDLQDLYICNVCSAEFQTRNEADVHLDSHIRKLQCKNCSEKFLNYYELGVHFLMHDGKGKVQCPLCSYVTNKKHNFKTHLDTQHLKRFSFYCKFVGCGKGFNQHLRLVEHEYRHTNKRPFVCIVCTKGFTSNRHLLRHQIFSHQVGFEGQKSCCSVCNRYFYHPNALVKHQSRCFAKKPVEVKQKKHLCVYCGHAFRHQNVMVEHIRSHTGEHPFVCSQCGKSFTKKIYLKDHERIHTGEKPYSCEYCGKRFARPTALRYHKRTHTGERPYRCALCNKGFTTNQALKVHKKNCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -