Aaen057959.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755045.1:9327801-9371327[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2e-05 0.0025 20.2 0.2 1 23 326 348 326 348 0.97 2 12 3.5e-05 0.0043 19.5 1.5 1 23 356 378 356 378 0.99 3 12 5e-05 0.0061 19.0 0.3 2 23 386 407 385 407 0.97 4 12 9.3e-06 0.0011 21.3 1.3 1 23 413 435 413 435 0.98 5 12 3.6e-05 0.0044 19.4 1.6 1 23 442 464 442 464 0.98 6 12 0.016 2 11.1 1.0 1 23 471 493 471 493 0.93 7 12 1.2e-05 0.0015 20.9 0.1 1 23 499 521 499 521 0.98 8 12 3.6e-06 0.00045 22.6 1.4 1 23 527 550 527 550 0.95 9 12 2.2e-05 0.0027 20.1 2.4 1 23 556 579 556 579 0.96 10 12 4.4e-05 0.0054 19.2 2.1 1 23 585 607 585 607 0.99 11 12 3.8e-05 0.0047 19.4 0.3 1 23 613 635 613 635 0.97 12 12 0.04 4.9 9.8 0.1 1 23 641 663 641 663 0.98
Sequence Information
- Coding Sequence
- atGTCAACCTCAGGAAATGTCTGTCTCATCTGTGATGCAGTTTGTACTTCTTTGAGGAACACCTATCAAATTTTCCACAAAGAGGCAACAGATAGGGACCCAGAAGAGATATGCCTTTATAGCCTACTTGAAGAGATTCTTGAGAGAGAAATAAAAGAAGACACAGTCCACACCAAAATACTGTGCAAAAAATGCTATAAACTCATCGATGAATATGACCACAATAAAAGTCGAATTAGAGATataaaaaattctatttttaacCAGTACTCAATACATTGTGAGAATAGGAATGAAATTATGAATCATTTGGAAATAATTGAGGGTACTGGGAAAAATACTTCTAAGGGTGGTGCAAGTTTGAAGATTGTTCAAGGTGGTAATTTGCCCAAGAAGATATTAGATATACCATCAAGTGACGAAGAATATGCTCATGACAGAGGTGATGTAGAGATGTCAGATTTTCAAGAGGAAAATGAATCAGAAGAGCCATACCAAAGCGATATGGTAGAAAATGTGTCAAAAAATGTCATTATAAAAAATGTGCAAAACTTTCCTGCTCCAACTTTCGTGTCTGTCAAAAGTGAATCATTCTCAGAAGAAAATACTCTACCTCAACTTATTACCATTCAAAAAGCAACGAGACAAAATGCCTTTAGTAAAGGTGGCGCCAAATTGGTTATCCAAATAGAAAAGCCTCCACCAAAAGTCAAACCTGACGATGATAACAAACCGAATATTCTGAAAAAGAAACTTATTACCACATCCAATGGCACATTAATTCAGGCAGTTGAAAAAAAAGAAGACGCAGAAGAGCTTAACAAAACGACCCTTGTATTTGAAGGTCCGCCTTTAGTTTCATatttaaaagaagaaaatatataCACCTGTTTGTTGTGTTCTGGTGAAGAAGGGGTTGCTGGCGAAGCAAAAGCAATAATCGAACATATAAAGGAAGTACACGATGCTCGTCTATACATCTGCGACGTATGCGGCGAGTCTTTCACCAAACGTCAAAACATGTCGGCTCACATGAACGATCACGTGGCCACCGAGGAGGGCGATTTCCAGTGCGAAGTTTGCAACAGGATTTTTAGCAATTTGAGGCTGTTTAGAATCCATAGAAGGATGCACAACCCTCAGAACAAATCCTGGACCTGCGAAACATGTGGCAAACGGTACTCCAGCAGAAATCTACTGGAAGAACACTTAAACATTCATCTAGGTGTCAGACCTTATGTCTGTCAAACTTGCAATAAAGATTTTACTAGCAAATACGCTTTGAAGTCCCATGAGAGGATTCATGAAAGCAGAGAAAGGAATTTTGAGTGTCCAACATGTGGAAAAACGTTTCTATCCCACTCAAATTTGGCGACGCACGAAAAAACTCATCTGCCTACTGTGAAAGAGTTcaattgcaatttttgtgaaaaacaATTCTCCACTATTCATGGTTTGGAGATTCACTCAGTGGTACACACGGGCTACAGGCCGTACGTTTGCGGCGTTTGTGGCAAAGCTTTCAGTAGAAAAGGAGAAATCAGAGACCACGAAAGGATACACACGGGAGAACGACCTTTTCAGTGTGAGTTTTGTGGCGCCACCTTTAGTCAAAAGTCGAATTTGCAAAGCCACAAAAAAGCCACGCACTACGAGGAGAAAAAACATTCTTGTGAGGAATGTGGGAAAAGTTTCAAACGCAAAAGACTTCTAGACTACCATTTAAAGTCGGCCCACACTGGCGAAAGACCATTCAAATGCGACGTGTGTGAGGCGACCTTTGTTTATCCGGAACATTTCAAAAAACACAGACGGATACACACTGGAGAGAAGCCATATGTTTGTGAGGTGTGCGGAAAAGCATTCAATAGTCGAGACAACCGAAACGCGCATAGGTTCGTACATTCGGACAAGAAACCGTACGAGTGTCTGGTCTGCGCCGCCGGGTTTATGCGCAAGCCTTTGCTGTACCAACACATGCAGTTGCACGGGCATATCAACGACACCATCGTGGTCAATCAGCCAAGCTGGACTGCTCCAGATGGACAATTGATTACAATAGAAGAGTTGTCAAACGATGAAACGGACGTCGCAGAAACCAAAGTTTTCGAGATGGATGAAAACCCCGACAATGAAAAGCAGATCCATATTGTAGGAGCACATTCCGAGGAAGGAGAAATTTTGGAGGAGATGGAACAGGTTATAACTCACAAAGAAAGCCATCTAGATGAAATGATCGGCGGCGAACTGACAGAAACAGAGACTCAAATTATAGATACACCCGACGGACCAATTCAACTTGTCAAAGTCAAAATACCCAACGAAAACGGTGAAGAAGAAGAGGCTTGGATCAAGATTGTGCCTGAATGA
- Protein Sequence
- MSTSGNVCLICDAVCTSLRNTYQIFHKEATDRDPEEICLYSLLEEILEREIKEDTVHTKILCKKCYKLIDEYDHNKSRIRDIKNSIFNQYSIHCENRNEIMNHLEIIEGTGKNTSKGGASLKIVQGGNLPKKILDIPSSDEEYAHDRGDVEMSDFQEENESEEPYQSDMVENVSKNVIIKNVQNFPAPTFVSVKSESFSEENTLPQLITIQKATRQNAFSKGGAKLVIQIEKPPPKVKPDDDNKPNILKKKLITTSNGTLIQAVEKKEDAEELNKTTLVFEGPPLVSYLKEENIYTCLLCSGEEGVAGEAKAIIEHIKEVHDARLYICDVCGESFTKRQNMSAHMNDHVATEEGDFQCEVCNRIFSNLRLFRIHRRMHNPQNKSWTCETCGKRYSSRNLLEEHLNIHLGVRPYVCQTCNKDFTSKYALKSHERIHESRERNFECPTCGKTFLSHSNLATHEKTHLPTVKEFNCNFCEKQFSTIHGLEIHSVVHTGYRPYVCGVCGKAFSRKGEIRDHERIHTGERPFQCEFCGATFSQKSNLQSHKKATHYEEKKHSCEECGKSFKRKRLLDYHLKSAHTGERPFKCDVCEATFVYPEHFKKHRRIHTGEKPYVCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCAAGFMRKPLLYQHMQLHGHINDTIVVNQPSWTAPDGQLITIEELSNDETDVAETKVFEMDENPDNEKQIHIVGAHSEEGEILEEMEQVITHKESHLDEMIGGELTETETQIIDTPDGPIQLVKVKIPNENGEEEEAWIKIVPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -