Aaen016273.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755039.1:701843-704575[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.018 2.2 11.0 1.2 1 23 13 35 13 35 0.97
2 29 0.014 1.7 11.3 7.4 1 23 44 66 44 66 0.97
3 29 0.024 3 10.5 3.8 1 23 75 97 75 97 0.97
4 29 0.014 1.7 11.3 7.2 1 23 106 128 106 128 0.97
5 29 0.0033 0.41 13.2 2.1 1 23 137 159 137 159 0.97
6 29 0.063 7.7 9.2 2.4 2 23 169 190 168 190 0.95
7 29 0.021 2.6 10.7 7.8 1 23 199 221 199 221 0.97
8 29 0.00099 0.12 14.9 1.2 1 23 230 252 230 252 0.98
9 29 0.025 3 10.5 2.0 1 23 261 283 261 283 0.95
10 29 0.0037 0.45 13.1 1.6 1 23 292 314 292 314 0.97
11 29 0.0019 0.24 14.0 6.6 1 23 323 345 323 345 0.98
12 29 0.036 4.4 10.0 3.4 1 23 354 376 354 376 0.97
13 29 0.014 1.7 11.3 8.9 1 23 385 407 385 407 0.97
14 29 0.0012 0.15 14.6 2.8 1 23 416 438 416 438 0.98
15 29 0.11 14 8.4 3.5 1 23 447 469 447 469 0.95
16 29 0.0053 0.64 12.6 1.7 1 23 478 500 478 500 0.97
17 29 0.014 1.7 11.3 7.4 1 23 509 531 509 531 0.97
18 29 0.0018 0.22 14.1 1.5 1 23 540 562 540 562 0.97
19 29 0.022 2.7 10.6 6.8 1 23 571 593 571 593 0.97
20 29 0.018 2.2 11.0 1.2 1 23 602 624 602 624 0.97
21 29 0.0023 0.28 13.7 5.1 1 23 633 655 633 655 0.97
22 29 0.018 2.2 11.0 1.2 1 23 664 686 664 686 0.97
23 29 0.021 2.6 10.7 7.8 1 23 695 717 695 717 0.97
24 29 0.00099 0.12 14.9 1.2 1 23 726 748 726 748 0.98
25 29 0.024 2.9 10.6 3.6 1 23 757 779 757 779 0.94
26 29 0.0066 0.81 12.3 2.3 1 23 788 810 788 810 0.97
27 29 0.0053 0.65 12.6 1.1 1 23 819 841 819 841 0.96
28 29 0.0026 0.32 13.6 4.0 1 23 850 872 850 872 0.97
29 29 0.036 4.4 10.0 3.4 1 23 881 903 881 903 0.97

Sequence Information

Coding Sequence
ATGCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTGACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAGGCCAAACAAAAAGGTCATTTAAGAACTCATATGCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTCACTTAAATACGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCAAACAAAAAGGTCATTTAAGATCTCATATGCTTAGACATAAAGACAAGAGTGAAGTTCAACAGTTTGAATGtaaaaaatgtagttttaagACCAAATACAGAAGCAACCTAAACCAGCATGCAATTATCCATAAAGACGTGGATAAAATCAAGTGGCTTTATTGTGCTCATTGCGATTATAAGACAAGATTCAATGGTCACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCaaacaaaaaggtaatttaaaaagtCATATGCATAGACATAAGGACATAAATGACattaagtggttttattgtgctAACTGCGATTATAAAGCCAAACGACAAGCTTATTTAAGATCTCATATGCTTAGACATAAAGACAAGAGTGAAGTTCAACAGTTTGAATGtaaaaaatgtagttttaagACCATACGCAGAAGAAGCCTAAACAAGCATGCAATACTCCATAAAGACGTGGACAAAACcaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTGACTTAAATAGGCATGCGCTAATCCATACAGACATAAATGACattaagtggttttattgtgcCCATTGCGAGTATAAAACCAAACAAAAAGATCATTTAAGAACTCATATGCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTCACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTACCCATTGCGATTATAAAGCCaaacaaaaaggtaatttaaaaagtCATATGCATAGACATAAGGACATAAATGACattaagtggttttattgtgctAACTGCGATTATAAAGCCAAACAAAAAGGTCATTTAAGATCTCATATGCTTAGACATAAAGACAAGAGTGAAGTTCAACAGTTTGAATGtaaaaaatgtagttttaagACCATACACAGAAGAAGCCTAAACAAGCATGCAATACTCCATAAAGACGTGGACAAAACcaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTGACTTAAATAAGCATGCGCTAATCCATAAAGACACAAATAACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCAAACAAAAAGGTCATTTAAGAACTCATATGCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATACAATGGTGACTTAAATAGGCATGCGCTAATCCATAAAGACACAAATAACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCAAACAAAAAGGTCATTTAAGAACTCATATTCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTGACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCaaacaaaaaggtaatttaaaaagtCATATGCTTAGACACAAAGACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTGACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTGGTTTTGTTGTGCCCATTGCGATTATAAAGCCaaacaaaaaggtaatttaaaaagtCATATGCATAGACATAAGGACATAAATGACattaagtggttttattgtgctAACTGCGATTATAAAGCCAAACGACAAGCTTATTTAAGATCTCATATGCTTAGACATAAAGACAAGAGTGAAGTTCAACAGTTTGAATGTAAAAAATGCAGTTTTAAGACCAAATACAGAAGCAACCTAAATACACATGCATTATTTCATACAGACGAACACAAAACCAAGTGGTTTTATTGTACTCATTGCGAGTATAAGACCAGTTTCAATGGTGACTTGAATAAGCATGCGCTAATCCATAAAGAAACAAATAACattaagtggttttattgtgctTCTTGCAATTATAAGTCCAGAAGGAATGATAATTTAAAGACGCATGCGCTAATCCATAAAGACATAAATGACattaagtggttttattgtgctAACTGCGATTATAAAGCCAAACGACAAGATCATTTAAAATCTCATATGTTTAGGCATAAGAACATAAATGACattaagtggttttattgtgctcATTGCGATTATAAGACAAGATTCAATGGTCACTTAAATATGCATGCGCTAATCCATAAAGACACAAATGACATTGAGTAG
Protein Sequence
MLRHKDINDIKWFYCAHCDYKTRFNGDLNMHALIHKDTNDIEWFCCAHCDYKAKQKGHLRTHMLRHKDINDIKWFYCAHCDYKTRFNGHLNTHALIHKDTNDIEWFCCAHCDYKAKQKGHLRSHMLRHKDKSEVQQFECKKCSFKTKYRSNLNQHAIIHKDVDKIKWLYCAHCDYKTRFNGHLNMHALIHKDTNDIEWFCCAHCDYKAKQKGNLKSHMHRHKDINDIKWFYCANCDYKAKRQAYLRSHMLRHKDKSEVQQFECKKCSFKTIRRRSLNKHAILHKDVDKTKWFYCAHCDYKTRFNGDLNRHALIHTDINDIKWFYCAHCEYKTKQKDHLRTHMLRHKDINDIKWFYCAHCDYKTRFNGHLNMHALIHKDTNDIEWFCCTHCDYKAKQKGNLKSHMHRHKDINDIKWFYCANCDYKAKQKGHLRSHMLRHKDKSEVQQFECKKCSFKTIHRRSLNKHAILHKDVDKTKWFYCAHCDYKTRFNGDLNKHALIHKDTNNIEWFCCAHCDYKAKQKGHLRTHMLRHKDINDIKWFYCAHCDYKTRYNGDLNRHALIHKDTNNIEWFCCAHCDYKAKQKGHLRTHILRHKDINDIKWFYCAHCDYKTRFNGDLNMHALIHKDTNDIEWFCCAHCDYKAKQKGNLKSHMLRHKDINDIKWFYCAHCDYKTRFNGDLNMHALIHKDTNDIEWFCCAHCDYKAKQKGNLKSHMHRHKDINDIKWFYCANCDYKAKRQAYLRSHMLRHKDKSEVQQFECKKCSFKTKYRSNLNTHALFHTDEHKTKWFYCTHCEYKTSFNGDLNKHALIHKETNNIKWFYCASCNYKSRRNDNLKTHALIHKDINDIKWFYCANCDYKAKRQDHLKSHMFRHKNINDIKWFYCAHCDYKTRFNGHLNMHALIHKDTNDIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-