Aaen046187.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755043.1:11469239-11473153[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.025 3.1 10.5 1.9 1 23 10 33 10 33 0.97 2 20 0.001 0.13 14.8 0.5 3 23 80 100 78 100 0.96 3 20 0.022 2.7 10.6 0.4 1 23 119 141 119 141 0.98 4 20 0.00066 0.081 15.5 2.1 1 23 144 166 144 166 0.98 5 20 1.2 1.4e+02 5.2 1.0 2 23 173 195 172 195 0.94 6 20 0.031 3.8 10.2 3.1 1 23 199 221 199 221 0.98 7 20 0.0052 0.64 12.6 0.3 2 23 227 249 226 249 0.94 8 20 0.0013 0.16 14.5 1.6 1 23 292 314 292 314 0.96 9 20 2.7e-06 0.00034 22.9 1.7 1 23 320 342 320 342 0.99 10 20 0.00034 0.041 16.4 6.8 1 23 348 370 348 370 0.98 11 20 0.0055 0.67 12.6 0.3 1 21 376 396 376 397 0.95 12 20 7.9e-05 0.0097 18.4 0.8 2 23 439 461 438 461 0.95 13 20 2.2e-05 0.0027 20.1 0.8 1 23 467 490 467 490 0.97 14 20 0.012 1.5 11.5 1.9 1 23 495 518 495 518 0.98 15 20 0.24 29 7.4 2.6 2 23 526 548 525 548 0.93 16 20 5.1e-06 0.00062 22.1 1.7 2 23 555 577 554 577 0.97 17 20 0.0042 0.51 12.9 3.6 1 23 601 623 601 623 0.98 18 20 4.3e-05 0.0053 19.2 1.1 1 23 630 652 630 652 0.98 19 20 2.2e-05 0.0027 20.1 0.7 1 23 658 680 658 680 0.97 20 20 0.012 1.4 11.5 5.8 1 23 686 709 686 709 0.95
Sequence Information
- Coding Sequence
- ATGAGGCACCACACTGGGGAGAAACCTTATAGCTGCAACCTATGCGAAGATAGGTTTGTCAGCAAATGGGACCTGGACAAGCATCACAAGAGGGATCATGAAACCCAGCAGTTTGTGACCAAATCTAAAGACGACAATCAATTTTCAGATGACTCAGATGCTATTAAAAAAGGTGCTGAAATTTCTGCAGATCCTATTAAGAAGAAAAAACTAAGGAAAAAAGAACCATCTCTAGATTGTAAAGTATGCAATGAAATTTTCGACACCATGAAGGAATTCAAATTACACATGAAAATTCATCAAATTAGTACTCTTCCCATTTTTTCATACAGATTTGAcgaagagaaaaatgtgtaTATATGCAACGAATGTTCCGCTGAATtcgaagaaaaattttcaacagAAACGCATATAAAAACGCACAAACGCTTTTCATGCACTGTATGTGATAAAAGTTTCGAATCCTGCTTTGATTTAGGTATTCATACCAGCACACATGAAACAGACTTGAAGATCAAATGTCCAATGTGCACGTTTACAACTTTTAAAGAAAAGCCATTTCAAAAACATCTAGATAGGGTTCATTTAAAGTCGTTTTACTGTTTGACTTGCTCAAAAACTTTCTACGATTTCCGAGTGTTTCAACAACATCAAAACATTCATCTTGGTATCAAGTGGCCTTGTGTTGTTTGTGACCGAACCTATTTTTCCGAACAAAAATTAGAGAGACATCAACAGCAAAACCATTACGCGGTTGTTTTTGGACAGGGGAATAACTGCATTCATTGTCTGGCATATTTCTACTATCCAGAATCTTGCAAAAAACATGAAGCCCAATGCTTAGTGAAAGCACCCAGAATTAGAGAACGCACATACCTGTGCAACTTTTGTGGAAGTAGTTTTACTGATACGTTCAAACTTCGAGAACACACAAGAATTCACACCGGAGAAGCTCCCTACGTATGTACTGTTTGCCAAAAGACATTTAGGAAAAAAGAATCTTTCCAAGTTCATTTAAGGGTTCACACTGGTGAAAAACCATACTCATGCGAATACTGTGGCAAAAATTTTAGACGTCACCAACATATACGAACTCACAAAAGGATTCATACTGGTGAAAGGCCTTATGTTTGCTCCTTTTGCAATCAAGGTTTTATAACAAATCAAGTTTTGAAGGCTCACCAGCAAAAATGTGTGAATGGTCAGTTATCCGAATATAACTTATACAATAGATTTAATTTTAGGAATAATTCAAACGGATATTTCCAAACATTAAATACTACTAATAAATCATTATTTATAAAAGAAATGTTAATCTGTAATGATTGTGGGAACAAATTTAAGACAAAACTGACACTACGGCAGCATATGAAATGGGTTCACCTTAGACAACAGGTTTTTAGCTGtgataaatgtcaaaaatcATTCCCATCTGCAGCTCATCTTAATGGTCACATTCAGATTAAACATAACGGAATTAAATACTCTTGTGAATTCTGCGAAAACTCCTTTAATTCCAATACTTGGTTAAAATTTCATATTAGAACTCGACACAGTGGAGAAAACCAAAGTGTAACTTGCCCTATTTGCAACATATTGTTAGCCCATCAGCGATCATTGAAAAACCACACGAACTTTTGTCACAACAAATATTACGAGAAACAGTGTCAATTTTGTGGTAAAGTGTATAGCTCCAGCACAAGTCTTAAAAAACATATCAAAATGATGCACACTGAGCCGCGAAAAAAACTGAAAGCTGTCAAAAAACTACAGTTGGAATATCAAGACGAAACCGGTGCTTATATTTGTAAAACTTGCGGACACCGATCCATTCATCCGGTATCGTTCAAACGCCACCTTCGCGAACATATCAAAGGTCGCAAAACATATTCCTGCGAAATTTGTGGAAAAAGTGTTACGAGCCTTCAAAGCTTTAACAATCACAAAAGAAGCCATACCGGCGAGAGGCCGTATTCTTGTGAAAAATGCAAGAAAACTTTTGTGTCTAGAGCCGGGTTGAGAACACATCAAGTCGTGCATTCAGGCGAGAAAAACCACGTATGTCAAATTTGTGGTAAAAGCTACAGTCAACGATCACCTTTAAAATGCCATATCTTAAAATGTCATGCTGATCAGTTGGAAAATGGCGTACTAAGAAATGATTTGGATTTATCAttaaaaagcaaataa
- Protein Sequence
- MRHHTGEKPYSCNLCEDRFVSKWDLDKHHKRDHETQQFVTKSKDDNQFSDDSDAIKKGAEISADPIKKKKLRKKEPSLDCKVCNEIFDTMKEFKLHMKIHQISTLPIFSYRFDEEKNVYICNECSAEFEEKFSTETHIKTHKRFSCTVCDKSFESCFDLGIHTSTHETDLKIKCPMCTFTTFKEKPFQKHLDRVHLKSFYCLTCSKTFYDFRVFQQHQNIHLGIKWPCVVCDRTYFSEQKLERHQQQNHYAVVFGQGNNCIHCLAYFYYPESCKKHEAQCLVKAPRIRERTYLCNFCGSSFTDTFKLREHTRIHTGEAPYVCTVCQKTFRKKESFQVHLRVHTGEKPYSCEYCGKNFRRHQHIRTHKRIHTGERPYVCSFCNQGFITNQVLKAHQQKCVNGQLSEYNLYNRFNFRNNSNGYFQTLNTTNKSLFIKEMLICNDCGNKFKTKLTLRQHMKWVHLRQQVFSCDKCQKSFPSAAHLNGHIQIKHNGIKYSCEFCENSFNSNTWLKFHIRTRHSGENQSVTCPICNILLAHQRSLKNHTNFCHNKYYEKQCQFCGKVYSSSTSLKKHIKMMHTEPRKKLKAVKKLQLEYQDETGAYICKTCGHRSIHPVSFKRHLREHIKGRKTYSCEICGKSVTSLQSFNNHKRSHTGERPYSCEKCKKTFVSRAGLRTHQVVHSGEKNHVCQICGKSYSQRSPLKCHILKCHADQLENGVLRNDLDLSLKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -