Aaen062799.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755046.1:5912161-5915961[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 0.0027 0.33 13.5 3.7 2 23 17 38 16 38 0.97 2 39 0.084 10 8.8 4.0 2 23 49 70 48 70 0.97 3 39 0.084 10 8.8 4.0 2 23 81 102 80 102 0.97 4 39 0.00066 0.081 15.4 2.3 1 23 115 137 115 137 0.95 5 39 0.0053 0.64 12.6 4.4 2 23 148 169 147 169 0.97 6 39 0.084 10 8.8 4.0 2 23 180 201 179 201 0.97 7 39 0.00019 0.023 17.2 3.9 2 23 212 233 211 233 0.97 8 39 0.019 2.3 10.9 2.5 1 23 242 264 242 264 0.98 9 39 0.00042 0.051 16.1 4.5 1 23 273 295 273 295 0.98 10 39 0.00042 0.051 16.1 4.5 1 23 305 327 305 327 0.98 11 39 1.2 1.5e+02 5.2 0.5 2 23 333 355 332 355 0.95 12 39 0.00063 0.078 15.5 4.7 1 23 360 382 360 382 0.98 13 39 0.52 64 6.3 1.7 1 23 391 413 391 413 0.98 14 39 0.00083 0.1 15.1 4.3 1 23 421 443 421 443 0.98 15 39 0.58 71 6.2 5.2 1 23 456 478 456 478 0.98 16 39 0.0028 0.34 13.5 5.3 1 23 491 513 491 513 0.98 17 39 0.075 9.2 9.0 6.6 2 23 524 545 523 545 0.97 18 39 0.21 26 7.6 6.3 1 23 554 576 554 576 0.98 19 39 0.00042 0.051 16.1 4.5 1 23 585 607 585 607 0.98 20 39 1 1.3e+02 5.4 1.2 2 23 613 635 612 635 0.94 21 39 0.00063 0.078 15.5 4.7 1 23 640 662 640 662 0.98 22 39 3.1 3.8e+02 3.9 2.8 1 23 671 693 671 693 0.97 23 39 0.00025 0.03 16.8 3.7 1 23 701 723 701 723 0.98 24 39 0.027 3.3 10.4 2.6 1 23 732 754 732 754 0.98 25 39 0.0006 0.074 15.6 4.0 1 23 763 785 763 785 0.98 26 39 0.00063 0.078 15.5 4.7 1 23 803 825 803 825 0.98 27 39 2.6 3.1e+02 4.2 2.4 1 23 834 856 834 856 0.97 28 39 0.026 3.2 10.4 2.9 1 23 864 886 864 886 0.98 29 39 0.00037 0.045 16.2 5.7 1 23 899 921 899 921 0.98 30 39 0.00034 0.042 16.4 5.0 2 23 932 953 931 953 0.97 31 39 0.092 11 8.7 6.3 2 23 964 985 963 985 0.97 32 39 0.16 19 8.0 7.0 2 23 996 1017 995 1017 0.98 33 39 0.00032 0.039 16.4 6.7 1 23 1057 1079 1057 1079 0.98 34 39 0.03 3.7 10.2 4.3 1 23 1088 1110 1088 1110 0.98 35 39 0.00095 0.12 15.0 4.7 1 23 1119 1141 1119 1141 0.98 36 39 0.53 65 6.3 0.6 1 23 1146 1169 1146 1169 0.97 37 39 0.00063 0.078 15.5 4.7 1 23 1174 1196 1174 1196 0.98 38 39 0.31 39 7.0 3.1 1 23 1205 1227 1205 1227 0.98 39 39 0.51 63 6.4 5.5 1 23 1235 1257 1235 1257 0.97
Sequence Information
- Coding Sequence
- ATGAGTGAAGTAGAATGGCTTCAAGAACGAAAGGACGAAAACGCAATTAAGTGCAAACATTGCACATATCAAACGAAACGGAAAGATGTTTTAAGGAGACACATGCTAATACATAAAGACATCCATAAGGACGAAAACGTGATTAAGTGCAAACATTGCACATTTAAAACGAAATGGAAAGATTCTTTAAGAAGACACATGCTAATACATGAAAACATCCATAAGGACGAAAACGCGATTAAGTGCAAACATTGCACATTTAAAACGAAATGGAAAGATTCTTTAAGAAGACACATGCTTATACATGAAGTCATCTGTAGAGAGAAAAATGAGATTAATTGGTTTCTATGTAAAAATTGTACATATAAAACGAAACGGAAAGATGGTTTAAGGAGACACATGCTAATACATGAAGACATCCATAAGGACGAAAACGTGATTAAGTGCAAACATTGCACATTTAAAACGAAACGGAAAGATGTTTTAAGGAGACACATGCTAATACATAAAGACATCCATAAGGACGAAAACGTGATTAAGTGCAAACATTGCACATTTAAAACGAAATGGAAAGATTCTTTAAGAAGACACATGCTAATACATGAAAGCATCCATAAGGAAGAAAACGCGATTAAGTGCAAACATTGCACATATAAAACAAAACGGAAAGATGCTTTAAGAAGACACATGCTAATACATAAAGACATGAGTAAAGTAGAATGGTTTCGATGTGAACAATGTACTTATAGGACTCAATATAAGCCTTACTTACGAAGGCATATGATCAACCATAAAGACGAGAACCAGATTAAGTGGTTTTACTGTCCTAAATGCAATTTCAAAGCTAAAAGAAATTATCATTTAACAAATCACATGCTAACACATAACAAAGACGAGAACCAGATTAAGTCGTTTTATTGTCCTAAATGCAATTTCAAAGCTAAAAGAAATTATCATTTAACAAATCACATGCTAACACATAATATAGTTCTGCTTCAATGTGCACAGTGTATGTATAGAACTATATAtaagaattatttaaaaacgCATATAATGATCATGCATAAAGACGAACAGTTTCAATGCTTCCACTGCAATTATAAAACGAAACTGAAAAGTAATTTAGCAAGACACATGCTTAGCCATAAACATATAAGTGATTTTAGGTGTTTCCAGTGTGAAAAGTGTAGTTTTAAGACAGAATACAGTAgagtccttaaacagcatgAGATAACACATAAAGTTAATCAAGTTGAGTTgtttccatgcaaacattgtacatttaaaacgAAACGGAAAAATGCTTTAAGAAGACACATGCTTATACATGAAGTCATCTCTAGAGaggaaaataaaattaattggtttTCATGCAAACATTGCGCATATAAAACGAAATGGAAACATGGTTTAAGAAGACACATGCTCATACATGAAGACATCTCTAGAGAGGAAAATAAGATTAATTGGTTTTCATGCAAACATTGCACATATAAAACGCAACGGAAAGAAACTTTAAGAAGACACATGCTAATACATGAAAACATCCATAAGGACGAAAACGCGATTAAGTGCAAACATTGCACATATAAAACGAAATGgaaacataatttaaaaagacaCATGCTAATACATAAAGACATGACTGAAGTAGAGTGGTTTCGATGTGAACATTGTACTTATAGGACTCATTATAAGCCTTACTTACGAAATCATATGATCAACCATAAAGACGAGAACCAGattaagtggttttattgtCCTAAATGCAATTTCAAAGCTAAAAGAAATTATCATTTAACAAATCACATGCTAACACATAATAAAGTTCTGCTTCAATGTGCACAGTGTATGTATAGAACTGAGTATAAGAATAACTTAAAAACGCATATAATGCAAAAGCATAAAGACGAACAGTTTCAATGCTTCCATTGCAATTATAAAACGAAACTGAAAAGTAATTTAGCAAGACACATGCTTAGCCATAAACACATAAGTGATTTTAGGTATTTCAAGTGTGAAAAGTGTAGTTTTAAGACAGAATACAGTAGAGTCTTTAAACAGCATGAGATAACACATAAAGTTAATCAAGTTGAGTTgtttccatgcaaacattgtacatttaaaacgAAACGGAAAGATGCTTTAAGAAGACACATGCTAATACATAAAGACATGAGTAAAGTAGAGTTGTTTCGATGTGAACAATGTACTTATAGGACTCAATATAAGCCTTACTTACGAAAGCATATGATCAACCATAAAGACGAGAACCAGATCAAGTGGTTTTATTGTCCTAAATGCAATTTCAAAGCTAAAAGAAATTATCATTTAACAGATCACATGCTAACACATaataagaattattttaaaacgcATACAATGATCATGCATAAAGCCGAACAGTTTCAATGCTTCCATTGCAATTATAAAACGAAACTCAAAAGTAATTTAGCAAGACACATGCTTAGTCATAAACACATAAGTGATTTTAGGTGTTTCCAGTGTGAAAAGTGTAGTTTTAAGACAGAATACAGTAGAGTCTTTAAACAGCATGAGATAACACATAAAGTTAATCAAGTTGAGTTgtttccatgcaaacattgtATATATAAAACGAAACGGAAAGATGTTTTAAGAAGACACATGCTCATACATGAAGACATCTCTAGAGAGGAAAATAAGATTAATTGGTTTTCATGCAAACATTGCACATATAAAACGAATCGGAAAGATACTTTAAGAAGACACATGCAAATACATGAAAACATCCATAAGGACGAAAACGCGATTAAATGCAAACATTGCACATATAAAACGAAAAGGAAAGATACTTTAAGAAGACACATGCTAATACATGAAAACATCCATAAGGACGAAAACGCGATTAGGTGCAAACATTGCACATATAAAACGAAATGGAAACATAATTTAAGAAGACACATGCTTATACATGAAAACATCCATAAGGACGAAAACGCGAATAAGTGCAAACATTGCACATATAAAACGAAATGGAAACATAATTTAACAAGACACATGCTAATACATAAAGACATAAATAAAGTGGAATTGTTTCGATGTGATAAGTGCTGTTATAAGACCAAATATAAGCATTGCTTAAAAACCCATATGAACATCCATGAAGACGAAAACGAGATGAATTGGTTTTCATGCAAACATTGCACATATAAAACGAAACGGAAAGTTAACTTAAGAAGACACATGCTAAAACATAAAGACATAAGTGAAGTAGAGTGGTTTCGATGTGAACATTGTACTTATAGGACTCAATATAAGCCTTACTTACAAAAGCATATGATCAACCATAAAGACGAGAACCAGATTAAGTCGTTTTATTGTCCTAAATGCAATTTCAAAGCTAAAAGAAATTATCATTTAACAAATCACATGCTAAGACATAATAAAGTTCTGTTTCAATGTGCACAGTGTATGTATAGAACTATATATAAGAATTATTTAGAAACGCATATAATGATCATGCATAAAGACGAACAGTTTCAATGCTTTCATTGCAATTATAAAACGAAACTGAAAAGTAATTTAGCAAGACACATGCTTAGCCATAAACACATAAGTGATTTTAGGCGTTTCCAGTGTGAAAAGTGTAGTTTTAAGACAAACTACAGAAGAGCCTTTAAACAGCATGAAATAACACATAAAGTTAATCAAGTTGAGTGGTTTCACTGCGCTCATTGCTATTTTAAAACTGAACGAAAAAGTCGTTTAAGAGAGCACATGCTTATACATAAAGTTATAAGTGAAGTTAAGTGGTTTTAA
- Protein Sequence
- MSEVEWLQERKDENAIKCKHCTYQTKRKDVLRRHMLIHKDIHKDENVIKCKHCTFKTKWKDSLRRHMLIHENIHKDENAIKCKHCTFKTKWKDSLRRHMLIHEVICREKNEINWFLCKNCTYKTKRKDGLRRHMLIHEDIHKDENVIKCKHCTFKTKRKDVLRRHMLIHKDIHKDENVIKCKHCTFKTKWKDSLRRHMLIHESIHKEENAIKCKHCTYKTKRKDALRRHMLIHKDMSKVEWFRCEQCTYRTQYKPYLRRHMINHKDENQIKWFYCPKCNFKAKRNYHLTNHMLTHNKDENQIKSFYCPKCNFKAKRNYHLTNHMLTHNIVLLQCAQCMYRTIYKNYLKTHIMIMHKDEQFQCFHCNYKTKLKSNLARHMLSHKHISDFRCFQCEKCSFKTEYSRVLKQHEITHKVNQVELFPCKHCTFKTKRKNALRRHMLIHEVISREENKINWFSCKHCAYKTKWKHGLRRHMLIHEDISREENKINWFSCKHCTYKTQRKETLRRHMLIHENIHKDENAIKCKHCTYKTKWKHNLKRHMLIHKDMTEVEWFRCEHCTYRTHYKPYLRNHMINHKDENQIKWFYCPKCNFKAKRNYHLTNHMLTHNKVLLQCAQCMYRTEYKNNLKTHIMQKHKDEQFQCFHCNYKTKLKSNLARHMLSHKHISDFRYFKCEKCSFKTEYSRVFKQHEITHKVNQVELFPCKHCTFKTKRKDALRRHMLIHKDMSKVELFRCEQCTYRTQYKPYLRKHMINHKDENQIKWFYCPKCNFKAKRNYHLTDHMLTHNKNYFKTHTMIMHKAEQFQCFHCNYKTKLKSNLARHMLSHKHISDFRCFQCEKCSFKTEYSRVFKQHEITHKVNQVELFPCKHCIYKTKRKDVLRRHMLIHEDISREENKINWFSCKHCTYKTNRKDTLRRHMQIHENIHKDENAIKCKHCTYKTKRKDTLRRHMLIHENIHKDENAIRCKHCTYKTKWKHNLRRHMLIHENIHKDENANKCKHCTYKTKWKHNLTRHMLIHKDINKVELFRCDKCCYKTKYKHCLKTHMNIHEDENEMNWFSCKHCTYKTKRKVNLRRHMLKHKDISEVEWFRCEHCTYRTQYKPYLQKHMINHKDENQIKSFYCPKCNFKAKRNYHLTNHMLRHNKVLFQCAQCMYRTIYKNYLETHIMIMHKDEQFQCFHCNYKTKLKSNLARHMLSHKHISDFRRFQCEKCSFKTNYRRAFKQHEITHKVNQVEWFHCAHCYFKTERKSRLREHMLIHKVISEVKWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -