Aaen046169.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aspidapion aeneum
Gene Symbol
-
Assembly
GCA_963576565.1
Location
OY755043.1:11306178-11319150[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.16 20 7.9 0.6 3 23 14 35 13 35 0.93
2 26 0.00019 0.023 17.2 1.3 1 23 57 79 57 79 0.98
3 26 8.6e-05 0.01 18.2 3.9 1 23 86 108 86 108 0.99
4 26 0.00083 0.1 15.1 1.9 2 23 115 136 114 136 0.95
5 26 0.028 3.5 10.3 0.2 1 16 142 157 142 159 0.91
6 26 0.15 18 8.0 3.4 1 23 201 224 201 224 0.96
7 26 0.0031 0.38 13.3 0.7 1 23 229 252 229 252 0.97
8 26 0.0033 0.41 13.2 0.8 2 23 259 281 258 281 0.95
9 26 0.79 96 5.8 0.3 2 23 288 310 287 310 0.93
10 26 3.1e-05 0.0037 19.7 0.8 1 23 315 338 315 338 0.98
11 26 1.9e-05 0.0023 20.3 1.8 2 23 345 366 344 366 0.96
12 26 0.27 33 7.2 0.1 3 23 373 392 371 392 0.95
13 26 3e-05 0.0037 19.7 1.1 1 23 398 420 398 420 0.99
14 26 4e-07 4.9e-05 25.6 0.4 1 23 426 448 426 448 0.99
15 26 0.34 42 6.9 0.1 1 13 454 466 454 470 0.89
16 26 1.1e-06 0.00013 24.2 1.5 1 23 694 716 694 716 0.98
17 26 8.8e-06 0.0011 21.3 1.7 1 23 722 744 722 744 0.98
18 26 0.0049 0.6 12.7 1.4 1 23 823 845 823 845 0.98
19 26 0.016 2 11.1 3.7 1 23 850 873 850 873 0.95
20 26 0.029 3.5 10.3 1.6 2 23 880 902 879 902 0.96
21 26 0.047 5.7 9.6 0.0 2 23 909 931 908 931 0.90
22 26 6.5e-06 0.0008 21.8 0.8 1 23 936 959 936 959 0.98
23 26 0.00047 0.057 15.9 4.8 2 23 966 987 965 987 0.97
24 26 0.0002 0.024 17.1 1.1 1 23 1019 1041 1019 1041 0.99
25 26 1.7e-05 0.0021 20.4 5.6 1 23 1047 1069 1047 1069 0.98
26 26 1.2 1.4e+02 5.2 1.8 1 20 1075 1094 1075 1096 0.92

Sequence Information

Coding Sequence
ATGGGGCACTTGCTGAGGCACAGGAAGGGAAAACAGCTGTGCGAAATTTGTGGAAAAGAAATGTCTAGCTCCAACTGTCTGAGGATTCATGTTCTGGAGACCCATCGTGGGatacAATCCAAAGCGTCTAAGCAGTTTGACCGAATGTACAAAGATCCGAACGGAATATATACTTGCCCAACTTGTGCCAAAGAATATTCCCATCGAGATTCTCTTGGACGCCATCTTAGAGAGCACAGAATTGGACGAAAAGTGTTCACTTGTGAGATGTGCGGGAAATGTCTTACTTCTAGCAGCAGCTTAAGaTTCCATATGCGAACTCACACTGGAGAAAAACCATGCAAATGCGAGTACTGCGAAAAAGAATTTTCTAACATCAAACTACTCAGAACTCATCTGGTAGTCCACACGAAAGAACGAAGGCACGAATGTCGAATATGTCAAAAACGATTTACACAGTCCGCTAGTCTTTCCGAAATTGTTTACATTAAAAGCGAACCTGACAGTGGTAACGATCTAGAACTCGGTAGAGAGTTTACTGAACAAATAATAAatgtaactttaaaaaatcccGATGTTCCCAATGGTGGCGAGCTAAAGTTTGATTGCAAAACTTGCAAGAAAAGTTTTCTCAGTATACGGACATTTAATAAACATATTTATACAAAccacaaagaaaaaaaatatgtttgtgaTTTATGCCCAAGTCGATTCTCATTTGCCTATTTgttaaaaaaccacaaaaatgtttatcatttaaaaaaagaaaaggtACAATGTAATTTGTGCGGGAAAATTTTGTCCAGTAGAAACTCGTTGAACTCTCACAACAAAAGCACTCATTATAGAGACTATAGTATAACATGTGATATTTGTGGTGATGGGTTTATGACGCATTCAAGATTAGACGCCCATAAAAAAGCAGTCCATGAAAAAATAACGTTTCAATGCCAGCAATGCCCAAAGGAATTCGCGTTTGAAGACTATCTAAGAAAACACATTTTAACAAATCATAACGACGTAGAAAAAATAGAATGTAAGGAATGCGATAAAACATTTTCTAACCAATATAGATACAGAAATCATATAAAGCAACACATTAAGAAAAAAGTAATTTGTGAAGTTTGTGGGAAAAGCATAAATGCATATACAATGAAAAATCATAAACTGATTCATGACGGTAAACGACCTTTTAAGTGTACCGTTTGTGAAAAGGATTTTAACAGACAAGAAATTCTCAAGGTTCACATGCGAACACATACTGGAGAGAAACCATATCAATGTGAATACTGTGACAAGTCTTTTATTCAACCGAGCCCTTTGAAAATCCACAGACGCATTCATACTAACGAAAAACCATACAGTTGTTCGAAATGCGAAAAGAAATTTATTTCTAACGCTGCTATaatttggATGGCAGAAGTTTTAGGAAAGTGTTTGGAAATATACTGCAGACTATGTCAGCGTTTTCTTATCGAATCATATACCTGTCAACATTCTAAATTTGAGAAATATAGTTGGTGCTCCAAATGCAAGAGGATTATTAAACCAGATGACCTCGAGTTTCATGAGTGctttattagtttttttcgggGTACCAACTatgaaatttattttaataatcaACCTATCGAAATTACAGAGAAATCTGAGAACAATCAGCCCGTGAAAATTGACGATATATTTGTTTATGATGAGATTAATAATGGTGATGTTAAAATTGAAACTGTCGTTGAATATATCGATGattttcaaattaaaacagAAAACGTATCTCACCAGTATATTAATGACGGTTTTGACGAAGAAAATGATATTTGCATTTACTGTAACAAAACTTTACCAATCATACAAATTGCACTCCACGAAGAGAATCATAGAAACAATCTTAAAGTTTTAGATACTAAAGGGCATAGCGataaaggtttatgtttgtattGTGGCATAGTAAGGTCGTATAGATACATAAAATCACATGAGCACAGGTTTCATACAATTCAGCCTAAAATTTGTGACATTTGTGGATTTAAAACCATACATCTAAACGCACACAAAGAAAGTCACTCTGAACTTCAAAAATACAAATGTCAAAAGTGCGAAAAGGCATTTAAAAGATACTCGGCCTTACGGAAGCATATTTTAGTACATTCTAACAAGAGCAAATATGTATGTAAcgtttgtaataaaaaatttaagatcaaatataatttaaatgTTCACAAAAGAATTCATTTTGATGTTAAACCATTTGGCTGTGACAAATGTGTAAATACATTTACTACAAAACAATGGCGCGACAAGCACGCTCTTTCGTGCTCAGAGTTTCAGAATTTAGATCATAAAAGAAACAGAAATAGAAAAACCATATCCAGCAATGTTAATCCCATAGAGTTTGTACAATTTGAATTGGCCCaagcatttattaaaaaagagaGTCCAGACGATTCCGATAATGGTACGCCAACTTTCAAGTGTGAAACTTGCGAAAAAGTTTTGCTCAGTAAACGGTTACTTTCCAGACATATGAGGAACCACAAAGAAAAAAGCCATATTTGTGATCTTTGCCCAAGGCGATTCTCATTTCTCCATTTGTTGGAACAACATAAGAAAATTTTCCATTTTAAATCTGAAAAAGTGGAATGTAATTTGTGCGGCAAAATTTTGTGTAGCCGCAATTCGTTATATATTCACAACAGAAGAACtcattataaaaattatagTGTAACATGTGATATTTGTGGTAGAGGATTCATGACGACTCCAAAATTAGTTGCTCATAAGGAAGCAGTGCACGATCGCGTTGCCTTTCAATGCGATAAATGTCCGAAAAGTTTTGCGTTAAAAGACTACCTAAGAACACATATTTTAACAAATCATAATGACATCGAACAAATACAATGTAAAGAATGTGACAAAACGTTTTCTAACAAACTTAGATATAGAAATCACATGAAACATCACAACAAGAAATATGTGATATGTGAACTTTGTGGTAAAAGTATGATTGCAGCTACAATGAAAAATCATAAACTTGTTCATAGCGGTGAACGACCCTTCAAGTGTAGCGTTTGTAATAAAGATTTTAACAAGCAACAAATACTTATTGTTCACATGCGAACACACACTAAAGAAAAACCTCATAAATGCGAATACTGTCATAAGTCTTTTAGCCAACAGAGTCCTTTAAAAATACACAAACGTATTCATACGCAGGAAAAACCATACAGTTGTTTGACATGCAAACAAAGATTTATATCTAAAAGCGTTATGGATAAACACGTGTGTCAGGCGACTAGCGATTACGACTTTTAA
Protein Sequence
MGHLLRHRKGKQLCEICGKEMSSSNCLRIHVLETHRGIQSKASKQFDRMYKDPNGIYTCPTCAKEYSHRDSLGRHLREHRIGRKVFTCEMCGKCLTSSSSLRFHMRTHTGEKPCKCEYCEKEFSNIKLLRTHLVVHTKERRHECRICQKRFTQSASLSEIVYIKSEPDSGNDLELGREFTEQIINVTLKNPDVPNGGELKFDCKTCKKSFLSIRTFNKHIYTNHKEKKYVCDLCPSRFSFAYLLKNHKNVYHLKKEKVQCNLCGKILSSRNSLNSHNKSTHYRDYSITCDICGDGFMTHSRLDAHKKAVHEKITFQCQQCPKEFAFEDYLRKHILTNHNDVEKIECKECDKTFSNQYRYRNHIKQHIKKKVICEVCGKSINAYTMKNHKLIHDGKRPFKCTVCEKDFNRQEILKVHMRTHTGEKPYQCEYCDKSFIQPSPLKIHRRIHTNEKPYSCSKCEKKFISNAAIIWMAEVLGKCLEIYCRLCQRFLIESYTCQHSKFEKYSWCSKCKRIIKPDDLEFHECFISFFRGTNYEIYFNNQPIEITEKSENNQPVKIDDIFVYDEINNGDVKIETVVEYIDDFQIKTENVSHQYINDGFDEENDICIYCNKTLPIIQIALHEENHRNNLKVLDTKGHSDKGLCLYCGIVRSYRYIKSHEHRFHTIQPKICDICGFKTIHLNAHKESHSELQKYKCQKCEKAFKRYSALRKHILVHSNKSKYVCNVCNKKFKIKYNLNVHKRIHFDVKPFGCDKCVNTFTTKQWRDKHALSCSEFQNLDHKRNRNRKTISSNVNPIEFVQFELAQAFIKKESPDDSDNGTPTFKCETCEKVLLSKRLLSRHMRNHKEKSHICDLCPRRFSFLHLLEQHKKIFHFKSEKVECNLCGKILCSRNSLYIHNRRTHYKNYSVTCDICGRGFMTTPKLVAHKEAVHDRVAFQCDKCPKSFALKDYLRTHILTNHNDIEQIQCKECDKTFSNKLRYRNHMKHHNKKYVICELCGKSMIAATMKNHKLVHSGERPFKCSVCNKDFNKQQILIVHMRTHTKEKPHKCEYCHKSFSQQSPLKIHKRIHTQEKPYSCLTCKQRFISKSVMDKHVCQATSDYDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-