Aaen070713.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755047.1:70728327-70771293[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 0.00012 0.015 17.8 3.3 1 23 192 214 192 214 0.98 2 32 0.13 16 8.3 4.4 1 23 223 245 223 245 0.97 3 32 0.0015 0.19 14.3 1.8 1 23 254 276 254 276 0.98 4 32 0.085 10 8.8 0.6 1 23 285 307 285 307 0.97 5 32 0.1 12 8.6 2.2 1 23 316 338 316 338 0.97 6 32 0.00012 0.015 17.8 1.3 1 23 347 369 347 369 0.98 7 32 0.0018 0.22 14.1 5.8 1 23 378 400 378 400 0.98 8 32 0.092 11 8.7 4.0 1 23 409 431 409 431 0.97 9 32 0.00044 0.053 16.0 1.5 1 23 440 462 440 462 0.98 10 32 5.1e-05 0.0062 19.0 4.6 1 23 540 562 540 562 0.98 11 32 0.031 3.8 10.2 2.1 1 23 571 593 571 593 0.96 12 32 0.001 0.12 14.9 2.2 1 23 602 624 602 624 0.97 13 32 0.0021 0.26 13.9 0.4 2 23 634 655 633 655 0.97 14 32 0.037 4.6 9.9 3.2 1 23 664 686 664 686 0.96 15 32 0.00044 0.054 16.0 5.1 1 23 761 783 761 783 0.98 16 32 0.011 1.3 11.6 3.2 1 23 791 813 791 813 0.97 17 32 0.016 2 11.1 4.6 1 23 822 844 822 844 0.97 18 32 0.00093 0.11 15.0 1.0 1 23 852 874 852 874 0.97 19 32 0.0076 0.93 12.1 3.9 1 23 889 911 889 911 0.97 20 32 0.00022 0.027 16.9 6.5 1 23 920 942 920 942 0.99 21 32 0.00044 0.054 16.0 5.1 1 23 1017 1039 1017 1039 0.98 22 32 0.011 1.3 11.6 3.2 1 23 1047 1069 1047 1069 0.97 23 32 0.015 1.9 11.1 1.7 5 23 1082 1100 1080 1100 0.98 24 32 0.0015 0.18 14.4 0.9 1 23 1108 1130 1108 1130 0.97 25 32 0.007 0.85 12.2 2.9 1 23 1145 1167 1145 1167 0.97 26 32 0.0002 0.025 17.1 3.6 1 23 1176 1199 1176 1199 0.97 27 32 1.5 1.9e+02 4.9 3.3 1 23 1204 1226 1204 1226 0.96 28 32 0.00016 0.02 17.4 2.0 1 23 1235 1257 1235 1257 0.98 29 32 0.00093 0.11 15.0 1.0 1 23 1265 1287 1265 1287 0.97 30 32 0.007 0.85 12.2 2.9 1 23 1302 1324 1302 1324 0.97 31 32 0.00019 0.024 17.1 7.0 1 23 1333 1355 1333 1355 0.99 32 32 0.093 11 8.7 2.2 1 23 1364 1386 1364 1386 0.94
Sequence Information
- Coding Sequence
- ATGGAAGTACCTCCTActaaaattacaataaataatgaacCTGATACGAAGTCTGTTGAGGAAATAATCAAAGAAATTAAAGAAGAACCCCTAGATAATATGGAGGTAGTGGATCCTCTGTACTACACCCCTTCTGACGGACCAACGCAAACGAGTTTAGAGGATTCGATGACGGGATGTAGCAATATATTTGGGATGGCAGACCTAGATTCCATACTGTCTTCATCCCCTGTAAAGTTGGAACCGTTTTACTTCGAAATGAAGACAGAAGAAGATCAAGTCAAGCAGGAGGAGTTTGTTTTTGCAGACAGCCTATCTGGTTCGCATGGAAACCCAATGTGTTCAAATATTTCTCAGTGCACCAGCGACCACTCTGTAAACAAAACCGCAATTCAAATAAGTGAGAAAGATATTGAGAAACTCACAAACACTGGAAAAAGAGAATATCCTATAATAGCTATTTCAGATTTAGGCAACCAGAAGATGGACTGTGAACTGAATTTGCAAATTAACATTCAATGTAGTCATAAAAACACCAAGGATACTTCTAAGATGCACGATATTGTTGATTGGTTTCAATGCGAATACTGTGATTATAAGAGCAAATCTAGATACACTTTAAAAAGACATATAAAACTtcataaagacgaaaacgaAATAGACTGGTTTGAATGTGAACAGTGTAGTTTTAAGACCGTACATAAACACAACTTAAAAATGCATGAAATTATGCATAAGAACATTAAAGAGATTGAGTGGTTTACATGTGAGAACTGTGACTACAGAACCAGATACAAACGTGCATTAAAGCAACATGCAATGACCCATAAACACTTAAAGGAAATTGACTGGTTTCAATGTGAGCTGTGTGCCTATAAGTccatatataaaaaaaacttaaaactgcATGCAATTATGCATAATAACGTTAAAGAGATTGCGTTGTATTCGTGTGAACATTGTGATTATAAAAGTAAATACAAAGGTAGTATAAAAATGCATGCGTTAATGCATAAAGACGTAAACGATATTAGGTGGTTTCAGTGTGCTTATTGCAATTATAAAGCTatacaaaaaggtaatttaaaaaaacacatgcTTAAGCATAAAGATTTAAGTGAAATTAAGTGGTTTCAATGTACTCACTGCGATTATAAGAGCAAATCTAGATACACTTTAAAAAGACATGTAAAACTtcataaagacgaaaacgaAATAGACTGGTTTGAATGTGAACAGTGTAGTTTTAAGACCGTACATAAACACAACTTAAAAATGCATGCAATTATGCATAAGAACATTAAAGAGATTGAGTGGTTTACATGTGAGGACTGTGACTACAGAACCAGATACAAACGTGCATTAAAGCAACATGCAATGACCCATAAAGACTTGAAGGAAATTGACTGCTTTCAATGTGAGCATTTGCATACAAATCCAACCTGTTCAAATATATCTCAATACACCATCGGGCATTCCGAAAACAAAACAACAATTCAGTCAGCTGAGAAACAGAATGAACAATGTTTTCAGCACATGACCAAACGTCAAAGAAAACATCCTAAAATGGCCACTCCAGATTTAGGCAACCAGAAGATGGACAAGAATGTTGACTGGTTTCAATGTACATACTGTGATTATAAGTTCAAACATAGATACAGTTTAAAAGAGCATGTAATGATTCATCAAAACGTTGAAGAGGTTAAGTGGTTTGTATGTAAAAATTGTGATTACAAGACCATTTACAAAAGGTACTTAAAACAGCATTCATTGATCCATAAAGACTTAAATGAAATTGATTGGTTTGAATGTGAATATTGTACTTATAGGTCCAGATataagaaaaacttaaaaaaacatgtaattATTCATACGAAAGTTAAAGATACTGAGTGGGTTTCATGTCAGGACTGTGACTTCAAATCCAGAAATAAAGGTGCCTTAAAAAATCATGCGAGAATCCATAAATACGTAAACAATATTAGGTGGTTTCAGTGTATCAATTGCGATTATAAAGCCAGGACAAAAAGGCATTTAACATCACATATGCTTATGCATACAGACGCAAATGAGATTAATTGGACCTATGAATATTCGGAAAATAACAGCTCAAGTATTTCCCAATGCACCAATGAAGAAACAGCAGAATCAGATGAAAAACAGCCTGAACAAAGTTTTCAAATTACGACAGCTGAGTCGAGCTTAGGTTCAAACGAAGCGCAAACAAGTTCATCAAAACAACTGCTAGGAAAGCTGCTAAGACGTTACGTCAATAAGAGGTTTCGGTGTGTTCACTGCGATTACAAAACTAACGATAAAAGTCATCTTACCAGGCACATAACCATACATAATGAGCCAGAAGTTAAGTTGTATCAATGCAAAATGTGCAGTTATGAGACCAAGCATAAAAGAAATCTACTACAACATGAACTTATTCATAAAGATGCAAAGGAGATTGAGTGGTTTCAATGTATACATTGTGATTATATAACTAAATATAAAAGTAATTTTACAAAGCACATAACCACACATAATGACCAAGAGGTTAAGTTGTATCAATGTAAAATATGCAGTTATGAGAGCAAGCAGAAGAAAAATCTAATGCAACATGCACTTATTCATAAAGATGTAAACCAGATACATAATGAACAAGAGGTTAAGTTGTATCAATGTAAAATGTGCAGTTACAAGAGCaagcataaaaaaaatctaatgcAACATGCACTTATTCATAAAAATGCCAACGAGATCGAGTGGTTCAAGTGTGGAAATTGTGATTACAAATCCAAACATAGGAGTCATTTAACAAGACATATGATTACACATAAAGACAACAACGAGGTTCAGCTGACCTATGAATATTCGGAGAATAACAGCTCAAGTATTTCCCAATGCACCAATGAAGAAACAGCAGAATCAGATGAAAAACAGCCTGAACCAAGTTTTCAAATTACGACAGCTGAGTCGAGCTTAGGTTCAAACGAAGCGGAAACAAGTTCATCAAAACAACTGCTAGGAAAGCTGCTAAGACGTTACGTCAGTAAGAGGTTTCGGTGTGTTCACTGCGATTACAAAACTAACGATAAAAGTCATCTTACAAGGCACATAACCATACATAATGAGCCAGAAGTTAAGTTGTATCAATGCAAAATGTGCAGCTATGAGACCAAGCATAAAAGAAATCTACTACAACATGAACTTATTCATAAAGATGCAAAAGAGATTGAGTGGTTTCAAGGTATACATTGTgattataaaactaaatataaaagTAATTTTACAAAGCACATAACCACACATAATGACCAAGACGTTGAGTTGTATCAATGTAAAATATGCAGTTACGAGAGTAAGCAGAAGAAAAATCTATTGCAACATGCACTTATTCATAGAGATGTAAACCAGATACATAATGAACAAGAGCTTAAGTTGTATCAATGTAAAATGTGCAGTTACGAGAGCAAGCATAAAAAGAATCTAATGCAACATGCACTTATTCATAAAAATGCCAACGAGATCGAGTGGTTCAAGTGTGGAAATTGTGATTACAAATCTAAACATAACAGTGATTTAACAAGACATATGATTAAACAACATGAGGTTCAGCTGTTTCAATGTAAAATATGCAGTTATGAGACCAAacatacaaatttttttatgacaCACGCACTCATTCATAAAGATGTAAACGAGGTTAAGTTGTTTCAGTGTGCACGTTGCGACTATATAACTAAATATAAAAGTAATTTGACAAAGCACATAACCACACATAATGGCCAAGGGGTTAAGTTGTATCAATGTAAAATATGCAGTTACGAGAGCAAGCAGAAGAAAAATCTAATGCAACATGCACTTATTCATAAAGATGTAAACCACATACATAATGAACAAGAGCTTAAGTTGTATCAATGTAAAATGTGCAGTTACGAGAGCAAGCATAAAAAGAATCTAATGCAACATGCACTTATTCATAAAAATGCCAACGAGATCCAGTGGTTCAAGTGTGGAAAGTGTGACTACAAATCTAAACATAGAAGTCATTTAACAAGACATATGATTACACATAAAGACAACAACGAGGTTCAGCTGTTTCGATGTAAAATATGCAGTTATGAGaccaaacataaaaaaaatgttatgaCACACGCAGTTATTCATAAAGATATACACTAG
- Protein Sequence
- MEVPPTKITINNEPDTKSVEEIIKEIKEEPLDNMEVVDPLYYTPSDGPTQTSLEDSMTGCSNIFGMADLDSILSSSPVKLEPFYFEMKTEEDQVKQEEFVFADSLSGSHGNPMCSNISQCTSDHSVNKTAIQISEKDIEKLTNTGKREYPIIAISDLGNQKMDCELNLQINIQCSHKNTKDTSKMHDIVDWFQCEYCDYKSKSRYTLKRHIKLHKDENEIDWFECEQCSFKTVHKHNLKMHEIMHKNIKEIEWFTCENCDYRTRYKRALKQHAMTHKHLKEIDWFQCELCAYKSIYKKNLKLHAIMHNNVKEIALYSCEHCDYKSKYKGSIKMHALMHKDVNDIRWFQCAYCNYKAIQKGNLKKHMLKHKDLSEIKWFQCTHCDYKSKSRYTLKRHVKLHKDENEIDWFECEQCSFKTVHKHNLKMHAIMHKNIKEIEWFTCEDCDYRTRYKRALKQHAMTHKDLKEIDCFQCEHLHTNPTCSNISQYTIGHSENKTTIQSAEKQNEQCFQHMTKRQRKHPKMATPDLGNQKMDKNVDWFQCTYCDYKFKHRYSLKEHVMIHQNVEEVKWFVCKNCDYKTIYKRYLKQHSLIHKDLNEIDWFECEYCTYRSRYKKNLKKHVIIHTKVKDTEWVSCQDCDFKSRNKGALKNHARIHKYVNNIRWFQCINCDYKARTKRHLTSHMLMHTDANEINWTYEYSENNSSSISQCTNEETAESDEKQPEQSFQITTAESSLGSNEAQTSSSKQLLGKLLRRYVNKRFRCVHCDYKTNDKSHLTRHITIHNEPEVKLYQCKMCSYETKHKRNLLQHELIHKDAKEIEWFQCIHCDYITKYKSNFTKHITTHNDQEVKLYQCKICSYESKQKKNLMQHALIHKDVNQIHNEQEVKLYQCKMCSYKSKHKKNLMQHALIHKNANEIEWFKCGNCDYKSKHRSHLTRHMITHKDNNEVQLTYEYSENNSSSISQCTNEETAESDEKQPEPSFQITTAESSLGSNEAETSSSKQLLGKLLRRYVSKRFRCVHCDYKTNDKSHLTRHITIHNEPEVKLYQCKMCSYETKHKRNLLQHELIHKDAKEIEWFQGIHCDYKTKYKSNFTKHITTHNDQDVELYQCKICSYESKQKKNLLQHALIHRDVNQIHNEQELKLYQCKMCSYESKHKKNLMQHALIHKNANEIEWFKCGNCDYKSKHNSDLTRHMIKQHEVQLFQCKICSYETKHTNFFMTHALIHKDVNEVKLFQCARCDYITKYKSNLTKHITTHNGQGVKLYQCKICSYESKQKKNLMQHALIHKDVNHIHNEQELKLYQCKMCSYESKHKKNLMQHALIHKNANEIQWFKCGKCDYKSKHRSHLTRHMITHKDNNEVQLFRCKICSYETKHKKNVMTHAVIHKDIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -