Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_963576565.1
Location
OY755038.1:204405415-204437656[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-09 4.6e-06 28.7 0.1 3 43 780 820 778 823 0.95

Sequence Information

Coding Sequence
ATGATTTACATAATTGGAGAAGCACAAGATATTGCACAAATGATTCAAGACCTTAATTCGGATCTAGAAAACATTGATGAAAAGATTAAAGCAACAATCGAGAAAAAAGAAACAGTCCCACTGCAAACTGCAAGCGTCAGTGTACGCGCCCTTATTGAAGAAAAGATCATCAATAAGAGGATTAATAATGCCGTGTCTCCAATTAGTAGTACCAATCACGGATCGCCTACGTCATATTCTTCCATTTCTACTGTGGAGGATCTGGACAAGAAAATTTCTTCCTTCGTAGTCCCGGCTCCACCTCAAAGTATCGTCGAAAAAGCCAGAAGACATTCCGATGCGGAAACCATTAAAAGTACCAAAACTCAGCAAGAAGCTGAAGCTTTGGCTGAGTTAATACTGAAAAAAGACAAGGTTCCCGTAAAACGCACTACCTCGGATCCAGGGCACTTATCTCAAATTCTACAATTTAGGTCGGACTCTTTCGCCCTGGACAACTCTGATACTGGCTCTGAGGACTCACAGTTCATATCCCAGAATTTGCACGATGAGGTTTTCAGTCAGGAAAATATTCTTTTACAAGGGGTCGACCCTAATCAATTGGAGCATCTCCATTTTCGACCCGAAACGCTCCTAGATGGAGACAGTGATGGACATTTGCAGGAACTAAACCTAGAGGACATCGCCAGTCTTCAAGAAGAATCTACCGAAGATGGCTCGCCTTACCCTTCGAATCACTCCGTTAACCAGGACCTGCAAGCGGTACTGAATTCTCCCTTGCCTGAAAGTTTGGCAGATTTTAGTACCTATCATGCTGGAAGTAGCTTGGATATGCAATCACCCAGTTTTAGTCAAGCTCAGTCACCAGCGCAATACTCCCGTTCACCACACGCATCTTTAACTGCGCAGTCGCCTTTGCAGAGCCCGTTGATTACCCACGACTCCATTGGGTTTGCGTATCCAACGCCACCTGCCAGTCACGAAGGTCAAAGTCCTTTTGGGCAGGGCTTGTCGATCCCTATGGTGTCGCCTCCTCAGACTGAGTTTGGTCAGGTTGCCAAAAGAGGCATAGATGAGCCACCTCAGGCTTCCTCCCCTCTCTCCGCAGCATTTTTTACCAGCACCATGAGCAGCTCTGCAGCGGTGGAAGAAGCTATTCAAGAAGTCCTGCCAGATGAAAGTTTGACGGATGCCGACAACCTCTATCCTTTGACAGATACCCCACCTCTACAGTCTGAATCTGATTCTTTTGGTTTAACTCCGGTTCCTTCACCGGTCGTGACTACTTCAGTACCTTCACCTCATCCCTCCACTACTTATAGTCCAAACCCGAGTACCTCATCCACTACTTACGGCCTTATGCTTCCCAACTCAGACGATCCGTTGCTGTCAAGTAGCCCGAAAGATTTTGCACCCAAAAGAAGATTTGAAATCAACGGGATACCTGTTAGATTGATAAGCAACAACGGTCTTATTGACCTTAACAACACAAACTTCGCCGGCCTAATTCTTGACTCAAACGGCGAAATCAAACTGATTCAAGCTAACGGAAACACGATTCAAACCAAAAATTTCGTCGTCACAAATACGCAGCTGGTCACAACGAGCACTCAAGATAATGTCCAAGATGGCGGGCGCTTGAAGAATTCGAAAACGAATAGAATGTCAACGAATAAAATTATAACGACACAACAACGGCCTATTAAAACAGAAATTAAAACAGAACCAGGAACGCAGAGCAATACGGTGTTCCTAAGTCCAACAACGATTCCTGCAAGCAGCCCCATCCGAATACCGCGCAAGAGACAACGCACCGAACCTTTACAGCTGCCAATCCTGCACCAATCAAAATTACGAGCGACCCGAAGTAAACCGCAGGGCATCTCGCAGTACACCCCTCAACCAATCTTAAATCCTCAGAGGCATGGGACCGGATTGTTTGCCAACTTAAAGTCTAAAGGCGAAGACAGTCCAATATGGTTCAACGATCCAATACCAGAGACGGACTCAACACCCCACATCAATGTTGGACAGCAGTTCCAGTGCAAGATTCCCACCTTCACTCCACCTACAAATAAGCGGGTTCCTGATCCTCCGCCGGAAGATCTGTTGTGGGATCCTGGTATTACTAACTGCTCAGATAAAGAAGtgaATATGTATCTGGATTTTGCCTGCTGTGCTGCCGTACCTGGTGGTGGTAGAAACAAAGAGTACGCCATGCATTTGTTGCACATGTGTGGGGGAAATATTCACGACGCTATGCTGCGTCTAATGCAACCCTACCCAATCTTGCCGGCAGACCACCCACTGCTGGCTTACCAGTACACTGAAAATGATAAATGGACAGCATTGGAGACTGAAATGTTCCACAGGGCACTGCTCAAGTACGATAAGGATTTTGAAAAGATTGCGGATGAGATGAAAACCAAGTCCATGACCCAATGCATCCAGTTCTACTACATCTGGAAGAAGGTATGCCAGGACGAGTATGGTCGACTGAAAACCATAAGACAGCTCAAACGAAACCACAAACATTCTCAAATGGAAGTGGACGAGAAGCCATATCCGGATGTGAGACTTTTAGGGATTGCTGATAGTGAATCGCCGTTGAACATAAGAGGCTTCTCCTGTGAATATCCAGACTGCTCTGCGAGCTTCAACTCACGCGCAGCTTTGAACGGACACATCCGGATTCACGGCGGTACGGTTCGTACTTCCCCCACCCCCGCCGGCTCTGCGACAGCCAATGGCGGCGGAGACAAACGCGCCAGCTCAACCCCCACCAGCCACCCCTCTCTCGCAACGCCCCTGGTCAGCTCAACGATCTGTCACCCAGACTCGACAGATCAAGAGTACCCATGCAAAGTTTGCGGGAAAATTTTCAGCAAGATTAAAAGTCGTAGTGCTCACATGAAATCACATCGCCCGCCGGATGCAGAACCATCGTCAAAACGTCGTCAGTCATCGGCAGAAAATCGGTCGTCTTCGACAGACCCTCGACAATCATCGGGCGATAATCGACAGTCATCGGTTGATGCTCGCCAGCTTTCGGGCGACGTTCAGCATTCTTCGATGGATAGTCGACAGTTTTCGGGAGCGGTCGACACCAGCGTCACTTATAGAAACAGTTTAAGAAAGGATATTGGCACTAGGGAGTTGCTGTCATCTTCAAATACCAGTGGAGATTCGGAGATATGGAGGATAGATTAA
Protein Sequence
MIYIIGEAQDIAQMIQDLNSDLENIDEKIKATIEKKETVPLQTASVSVRALIEEKIINKRINNAVSPISSTNHGSPTSYSSISTVEDLDKKISSFVVPAPPQSIVEKARRHSDAETIKSTKTQQEAEALAELILKKDKVPVKRTTSDPGHLSQILQFRSDSFALDNSDTGSEDSQFISQNLHDEVFSQENILLQGVDPNQLEHLHFRPETLLDGDSDGHLQELNLEDIASLQEESTEDGSPYPSNHSVNQDLQAVLNSPLPESLADFSTYHAGSSLDMQSPSFSQAQSPAQYSRSPHASLTAQSPLQSPLITHDSIGFAYPTPPASHEGQSPFGQGLSIPMVSPPQTEFGQVAKRGIDEPPQASSPLSAAFFTSTMSSSAAVEEAIQEVLPDESLTDADNLYPLTDTPPLQSESDSFGLTPVPSPVVTTSVPSPHPSTTYSPNPSTSSTTYGLMLPNSDDPLLSSSPKDFAPKRRFEINGIPVRLISNNGLIDLNNTNFAGLILDSNGEIKLIQANGNTIQTKNFVVTNTQLVTTSTQDNVQDGGRLKNSKTNRMSTNKIITTQQRPIKTEIKTEPGTQSNTVFLSPTTIPASSPIRIPRKRQRTEPLQLPILHQSKLRATRSKPQGISQYTPQPILNPQRHGTGLFANLKSKGEDSPIWFNDPIPETDSTPHINVGQQFQCKIPTFTPPTNKRVPDPPPEDLLWDPGITNCSDKEVNMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPYPILPADHPLLAYQYTENDKWTALETEMFHRALLKYDKDFEKIADEMKTKSMTQCIQFYYIWKKVCQDEYGRLKTIRQLKRNHKHSQMEVDEKPYPDVRLLGIADSESPLNIRGFSCEYPDCSASFNSRAALNGHIRIHGGTVRTSPTPAGSATANGGGDKRASSTPTSHPSLATPLVSSTICHPDSTDQEYPCKVCGKIFSKIKSRSAHMKSHRPPDAEPSSKRRQSSAENRSSSTDPRQSSGDNRQSSVDARQLSGDVQHSSMDSRQFSGAVDTSVTYRNSLRKDIGTRELLSSSNTSGDSEIWRID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01128955;
90% Identity
iTF_00170297;
80% Identity
iTF_00170297;