Aaen003817.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755038.1:48030678-48031190[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-08 1.8e-05 26.4 0.1 7 38 21 52 20 59 0.88
Sequence Information
- Coding Sequence
- ATGCCGAGAAAACGCACCAGAAAAACAAATCGCTCAAATATTAGCGAACTACATGACAAAGAAGCCATTAAAGCCATTTTGTCCAAATGCCTAAGCCAATATCAGGCAGCGCAAGAATACCAAGTGAAACGTCAAACTCTTCAGTCACGAATTAAAAAGTTACTTGAGCACAACACGAAGGAAGAGCTGCTGCGTAGTTTGGAAGACTCTGGCAATGAAAGCGACCAATCAGATACGCCAGTTTTCTCCAACAAGTATACCGCTCACCAAGTATTTAATTTCACACAAGAAAATGAATTGGTCACATACATAATATCATGTTGCAATTTAAACTATGGACTGAACTATAAAGACATAAGAGCTCTAGCTTACGAATTTGAGAGGATACCATTGCTGTTGGAAATTTTGTCCTTGTCAAATTCGTCGTTGCAAAATCAGAAATTTATTATATTGGAAAAGTCCAGGTCTTACCTGCCGGCAACGAAGTTCAAGATTTTGAAATATCTTTTTTGA
- Protein Sequence
- MPRKRTRKTNRSNISELHDKEAIKAILSKCLSQYQAAQEYQVKRQTLQSRIKKLLEHNTKEELLRSLEDSGNESDQSDTPVFSNKYTAHQVFNFTQENELVTYIISCCNLNYGLNYKDIRALAYEFERIPLLLEILSLSNSSLQNQKFIILEKSRSYLPATKFKILKYLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00169231;
- 90% Identity
- iTF_00169231; iTF_00169202; iTF_00169207; iTF_00169208;
- 80% Identity
- -