Aaen060769.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755045.1:57657300-57662308[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-09 2.9e-06 28.9 0.0 1 38 14 51 14 55 0.93 2 2 3.3e-07 0.00016 23.4 0.0 2 37 429 464 428 472 0.87
Sequence Information
- Coding Sequence
- ATGTCCATGCTTCGTTGGAAAAAGTCGAGGCAAAATTATACCGAAGAGGACTTTGTTAATGCCCTTCGTGCAATACGAAGTAACGAGCTATCAGTCAGAGCTGCATCAATTAAATTCAAAGTGCCTAGAAGAACTCTTAGTACTCGCATTTCCGGTTTTAGACCTGACAAAATGTTAAAACTTGGATCGCCACCAGTACTATCACAAGATACTGAAACACAAATAGAAGAGTGGTTAATTGAAATTGCCGATCGCGGTTTTCTTTTAAAAAGACAAATGGTCATAGATACAGCAGGCGTGATCGCAAACATTCAGCCAAAAAGATATTGGTGTATGAATTTCTTAAAAAGACATCCCACGGttgataaattaataaaaaaatcagaaaattcTCTAAGAACTACCCTAACTGAAAAGTCAATTAGACTTTGGTTTAAAGGGTTCGTTGGATTTTTACGTCAGAAAAACTTAATAGATATTCTTCAGGATCCGCGTAGGATATTTGTGCAAAACAAAACCGAGTACTTGGTATGTTCACGAACCACAATAATCGAAAAACCAAAACTACACAGAAATCTTTGTGACGGAAAAGAGAACATGACTATTGTGGTTACACTTAATGCAAACGCCAATATTGCTCCACCATTAGTCATTTTTAATTACGACTCAACTTCTGACGATTTGGGCGAGGATATACCAGAAGGTTGGATTCTAGAAAAGTCAGATCAAGGTAATTTGACATCAGATATATTATTTGACTACACTGTTAATTCATTAAACAACTGGTTAATAAAGGAAGATATAACTCGACCAATTATTTTGCTTATGGATGGAAGTAATTCTCATCTACCGATAGGTGTGGCCCAGTGGTGTGAAGAAAACGAAATAGTTTTATTCGGTTTACCACCCAATAGCATGTATATTTTGCATCCAATTAATGAAGTCCTAAAACCTTTGCAATCTGACTTTATTAGTACCGCACGTGAGTGGCAAAATAGGCCGGAAAACATGGGTGACCCAGTTACCAAACATAATATTTGTAATGTATTTAACGAAGTGCTTACTAGATCTAAAGAAATTCAGTCTAAGATTTTAAAGTCTAAGTACTTTTTAGTACCGATATCTTGTATTTCAAAATCTAGAAGAAGAGGCCGTCCTAAAAAATATGAAGAAATAGTTGAGAAAACGAAATTTGCTGTTGCGAAAAAGAAAAACCTTAAAGTTTTTCGAGGACCAAAGCTGTTAAAATCCAAAGGATGCGAAAAATCTAGACAAAACTATACTGACCAGGATTTAGTAAATGCACTTCGTGCGATACGAAACAACGAGCTCTCAGCCAGAGCTGCATCAATTAGGTttaaagttcctagatccacGCTTAGAACTCGAATTCATGGCGTTAAACCTGATAGAATGTTAAAAGCTGGATCACAAACTGTATTATCAGGAGATACtgaaatacaaataaaagattGGTTAATTGAATTGACCAATCGCgggttttgtttaaaaaagacAATTATTATGGACACAGCCGGCATACTGGCAAATTTCGAGCCAAAAAGGAAATGgtattcaaattttttaaaacgaCACCCCGAAATTACTGTTTTGCTAGAAAAATCGGAAACTGGCATGAGAGCTAAAATCACAGAGAAAACAATTAGAGCGTGGTTTGAAGGATTTATTCAATATCTACGTGAGAACAATATACTTGATGTACTTCAGGATCGGCGTAGGATATTTTTGCAAAGTAAAACTGAATAtttgatttgtttaaaaactgGAAATATTCAAAGGCcaaaattgcataaaaatatttctgctgAGATAGAAAATATGACTGTTTTAGTGACACTTAATGCAAACGCAAATATCGCCCCGCCTTTAGTTATTTTTCCTTACGAAACCACTTCCGATGAAATGAGTGACAACTTACCACAAGGCTGGGTTCTAGAAAAGACTGACCATGGTAATCTAACCTCAGATATTTTATTTGATTATACCGTTAACTCATTAAACAACTGGCTAATGAAGGAAGACATTCCGCGACCAATCATCTTACTTATGGATGGAAGCAATTCTCATCTAATGATGGGTACTACCCAGTGGTGTGAAGAAAATGGAGTTATCCTGTATGGGTTACCACCTAATAGCATGCACGTCTTAAATCCGACTAATGAAGCTTTAAAACCTATGCAGTCTGATTTTATAAGCACCGCACGACAGTGGCAGGATCGACCTACAAATATGGGCGATCCTGTTACCAAATACAGTATTTGTAATGTTTTAAACGAAGTGCTTGCTAGATCTCCAGAGTTTCAATGTAAAGTTACAAATGGGTTTCGAGATAGTGGTATTTTTCCGTTAAATACAGAGGCAGTCGATTATTCTAAATGCAGTgcaatAGGCCGCATTCAGCAGTTCTTATCTAGGTTTTCAGGCGAGAGCAAGGTTATAGGTCACGGTCGTGTCGAGAATAGCTCCAATCAAAAGGAAACAACTTTGACCATAAATGCATTAAAGAGTGGTAGCGTTACTGGAAAAGATTTAGCTCTGAAGTATGAAGTGGGCACAATCAGCGATATTCACACAGTGTACCTGAATGAAGaatag
- Protein Sequence
- MSMLRWKKSRQNYTEEDFVNALRAIRSNELSVRAASIKFKVPRRTLSTRISGFRPDKMLKLGSPPVLSQDTETQIEEWLIEIADRGFLLKRQMVIDTAGVIANIQPKRYWCMNFLKRHPTVDKLIKKSENSLRTTLTEKSIRLWFKGFVGFLRQKNLIDILQDPRRIFVQNKTEYLVCSRTTIIEKPKLHRNLCDGKENMTIVVTLNANANIAPPLVIFNYDSTSDDLGEDIPEGWILEKSDQGNLTSDILFDYTVNSLNNWLIKEDITRPIILLMDGSNSHLPIGVAQWCEENEIVLFGLPPNSMYILHPINEVLKPLQSDFISTAREWQNRPENMGDPVTKHNICNVFNEVLTRSKEIQSKILKSKYFLVPISCISKSRRRGRPKKYEEIVEKTKFAVAKKKNLKVFRGPKLLKSKGCEKSRQNYTDQDLVNALRAIRNNELSARAASIRFKVPRSTLRTRIHGVKPDRMLKAGSQTVLSGDTEIQIKDWLIELTNRGFCLKKTIIMDTAGILANFEPKRKWYSNFLKRHPEITVLLEKSETGMRAKITEKTIRAWFEGFIQYLRENNILDVLQDRRRIFLQSKTEYLICLKTGNIQRPKLHKNISAEIENMTVLVTLNANANIAPPLVIFPYETTSDEMSDNLPQGWVLEKTDHGNLTSDILFDYTVNSLNNWLMKEDIPRPIILLMDGSNSHLMMGTTQWCEENGVILYGLPPNSMHVLNPTNEALKPMQSDFISTARQWQDRPTNMGDPVTKYSICNVLNEVLARSPEFQCKVTNGFRDSGIFPLNTEAVDYSKCSAIGRIQQFLSRFSGESKVIGHGRVENSSNQKETTLTINALKSGSVTGKDLALKYEVGTISDIHTVYLNEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -