Aaen060746.1
Basic Information
- Insect
- Aspidapion aeneum
- Gene Symbol
- -
- Assembly
- GCA_963576565.1
- Location
- OY755045.1:57038528-57053374[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-12 6.6e-10 40.6 0.1 14 45 11 43 2 43 0.90 2 2 1.2e-16 5.5e-14 53.7 0.0 1 39 50 89 50 93 0.94
Sequence Information
- Coding Sequence
- aTGTCTATTCGTTTAataagaacatccaaaaaagGTCAAACGTCCGTCCAGAAGGCGTCTACAGAATTCGGAATCCCAACAGGCACATTGTACGGAAGGTGTAAACGGGAAGGTATTGAACTGTCCAGATCCAATCCGACCCCTTGGTCTGAGGATGCAATGGGAGAGGCGTTAGAAGCTGTAAGGTTGGGCCATATGTCAATAAACCAGGCCGCAATCCACTACAACCTTCCCTACTCCTCCCTCTACGGCCGCTTTAAACGTGGCATTAAATACGATGCCGACAACATGGAAATAACGCCAGATCCTTTAGCACAAATGGAGCCACAAAATCAATTCCAAAACGTTGAATACAGCAATGGACAACAGATTCAATACCAATCGCATTCCAATAGCTGA
- Protein Sequence
- MSIRLIRTSKKGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDADNMEITPDPLAQMEPQNQFQNVEYSNGQQIQYQSHSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -