Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963576565.1
Location
OY755040.1:42895387-42911436[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-24 1.4e-20 75.5 0.2 1 89 152 238 152 238 0.93

Sequence Information

Coding Sequence
ATGGTTTTAGAAAATGCGATCAACACTTCTTCAGGACCTCACGTAATCATTTTGAGTTTCCCAAAGTACTGCCGCTACAGGGCAGTGATGAAAAGACTGGAAGGAGTAGAGAACCAGTACCTTAAACTAAAGATAGTCAATACTTTAGGCGGATTTTACGTCAAATATCCTAATACTAGGGTTCTCTACTGCAAGGATAATTTCGAGTACCCAGACATCGAAGGCCATGAACTCTTGTGCAATCATTTGGCGCCAAAACTTAAAGGTAGACCGAGAGGAAGACGGAAAAAGACAAGAAGCCTGTCGCCGGGCTCGGAAAGCAACGAGAGCGAATCTTCTACTAATAATTTGGGTGCAAACAATCGACCAGTTAGGGTGCTAGAGAAACAAACAGACAGACTGTCAGATTCGGCAAAAGGGACCAGAAGGAGTACCAGAACCATCGAAAATAATGAAAACAAGAAATTTATGAAAACTTTAACTGCCTATATGAAGTCCAAACAAATGCCCATGGGAAGAGTTCCTTCTTTGGGATATAAAGAACTGAACCTGCACGAGTTTTACACGAAAGTGCAAAAATTGGGAGGTTACGATTCCGTTACGAAAAATCGCTTGTGGAAAAGTATTTTCGAGGAAATTACCGGTTTGGCGAACAGTACAAGTGCTGCCACCATCGTGAGGAGACACTATGAAAGATTTTTGCTATCATACGAACGATTTACAAAAGGCGAAGATCACCGACCCCTTCCAGTGTCCGAAAGAAAACGTCTTAAAAAGGaattaaaacgcaaaaaaggAAAAAGTGCGGCAGCAAGCAAAAAAGCTAATTACGGCGCCAACAACAATGGCGAAAATGAGACACCAGGTGGCGTTAAGACTTTGCTTTCGATCAAGAAGCAACACGCTTTGCCCGTAGGCAATGAAAACAAGGACCAAAATAACCCGACCAAACCTACTTCTCTAAGACACATCCGAGTGAAACCCGAACGCCAAAAGGACAAACAGTTAATGAGACAATTAAGCAATAGTGATTTGGACAAAGAAAAGGACAACATGTTAAATATGAGTGACGTTAAAAGTGAATCAAGTTCTGTGCTTACACTTGAGGACAATATTCAGAACTCAAGCAGTAAAGTGAACATAACGGCTGTTGAAAACGAAAGTTTAAATCCTAAAGTGGAAGATTTCAAACCTGAAAGTCCAAATATCACTGAAGAAACAAACGCAGAAACTCCTTCTGAAAATGTTATAGAAAGTACACAATTAGATTCAATCGTCGTTATAACAGGGTCTCCACAAAGTGAACCTGTAGCTCAAGACCTGGAACCATTAGATGCAGAACCCATAACCTCAGCTGTAGCTCCCGTTGTTCAAGTTACGATACCAGAACAGAGTTCTTCACCAGTTGAGGGTAAAGAAAATATTCCTCTGGTTAAAGAGGATGAAGCCAGTTTGCCTGAAAATGAAGGAGATACACAGGAAGCCAACAATGATAATTCTAAACCAAATTCACCTGACTTACAAATTTCTCAAGTAGATTCAAATCTGGTAAAGCCAGAAAATaaagattttcataaaaaagttAAGTTAGACATCTTACGGGACCAAGGTCTAGAAGTTACACCGATTAAAGGTTCGGCTGGTGTTTCTATAGTAAAAGATATTAGACCTTCTGTTATTCAATCTTCAGTTGCAAAAAGCTTGATGCCACCTCCCGGACTGCCGAAAAAGATAAATGTTTCGATCACTCCTGCTACGCCGATCAAGTCTAATATACCCAATATTGCCAAATCGCCTAGTCCTGTGAAAGACTTTAAGTTTATGAATGGAGGGACTCCTCCTAAGGTTGTTCAATCGAAGTCAATTTACTCTACCGACAGGCAAACCTGGTACGGAAATCCCAAAGATATATTTGCTCAACCAACTATGGTACCAAGATTCCCCACTTCAGTCCCTCCAAGATTAAGTGGTGGAAACCCTATGGCCATCGATTTAAGCGTTACAAGTCCCGTTAAGCCTGTTTTGGAAATAAGTCCAATTCCTCAAAGTTCAAACTCGAATCAATCAATGCCAATGTCTGGCCGGATAAGTGTATccaaaaatttgtataaaaacgATACTAATACAATTTTCGGTGGTAAGCGAGTAGGGTCAAATTTGGAAATCACCCTAGTTGGACCTACGAATTCCCAGTCCATGAAGCCTGTCAACAGCAGTTCGCATAAGAGATCGTCTAGTGAAACTTACGCgcacaaaattgcaaaattaaGAATGAGTGACCACAATTTACCTATGCAAGATAAATACAGTGTTCCTTTACCAAGAAGGACTGATTTGAGCATTACTGGTGGACCTAGTACTAGTAGTACAAGTAGACATTCTAATAACTTTAGAAGTAGCAGTAGTGATGTAAGATTAAATTATTCCTCATCAAAAAACAGTAGTAGTGGTTCTAAGTTGTCTTCTTCTAGTAGTAAATCAATGGTGCCCCAGATTTCCTCCTTCCCTGAAAGTGCTTCATCAAACGGTGCTCTTGCTGGCCTATCTAGTGGTTTGCCTATAATACCTCCAAGTTTGGGGCTGGACATTTACGCTTACCAAGCGGCCATGCAGAGTTTGTATAACAGCTTGCCAAACATGTCAAATTTACCTAGTTTACCGCCGCCTGTTCTGCCCATTCCTACTCCCGAGCAGTTGAAATTTTATGCTGAGTTGATGGCCGGCAACAGATTGGGTTTTAACCCATTCTTAGCACAAAATGGAGTAAATAATGGTggaaaaaattcttaa
Protein Sequence
MVLENAINTSSGPHVIILSFPKYCRYRAVMKRLEGVENQYLKLKIVNTLGGFYVKYPNTRVLYCKDNFEYPDIEGHELLCNHLAPKLKGRPRGRRKKTRSLSPGSESNESESSTNNLGANNRPVRVLEKQTDRLSDSAKGTRRSTRTIENNENKKFMKTLTAYMKSKQMPMGRVPSLGYKELNLHEFYTKVQKLGGYDSVTKNRLWKSIFEEITGLANSTSAATIVRRHYERFLLSYERFTKGEDHRPLPVSERKRLKKELKRKKGKSAAASKKANYGANNNGENETPGGVKTLLSIKKQHALPVGNENKDQNNPTKPTSLRHIRVKPERQKDKQLMRQLSNSDLDKEKDNMLNMSDVKSESSSVLTLEDNIQNSSSKVNITAVENESLNPKVEDFKPESPNITEETNAETPSENVIESTQLDSIVVITGSPQSEPVAQDLEPLDAEPITSAVAPVVQVTIPEQSSSPVEGKENIPLVKEDEASLPENEGDTQEANNDNSKPNSPDLQISQVDSNLVKPENKDFHKKVKLDILRDQGLEVTPIKGSAGVSIVKDIRPSVIQSSVAKSLMPPPGLPKKINVSITPATPIKSNIPNIAKSPSPVKDFKFMNGGTPPKVVQSKSIYSTDRQTWYGNPKDIFAQPTMVPRFPTSVPPRLSGGNPMAIDLSVTSPVKPVLEISPIPQSSNSNQSMPMSGRISVSKNLYKNDTNTIFGGKRVGSNLEITLVGPTNSQSMKPVNSSSHKRSSSETYAHKIAKLRMSDHNLPMQDKYSVPLPRRTDLSITGGPSTSSTSRHSNNFRSSSSDVRLNYSSSKNSSSGSKLSSSSSKSMVPQISSFPESASSNGALAGLSSGLPIIPPSLGLDIYAYQAAMQSLYNSLPNMSNLPSLPPPVLPIPTPEQLKFYAELMAGNRLGFNPFLAQNGVNNGGKNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-