Ajap021718.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- stc
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000021.1:28337-33420[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 3e+04 -4.1 1.6 15 19 349 353 348 353 0.81 2 14 0.16 2.5e+03 -0.6 0.3 4 10 382 388 381 390 0.93 3 14 2.5e-05 0.38 11.5 13.9 3 18 398 413 384 414 0.88 4 14 0.0026 39 5.1 10.2 1 19 450 468 450 468 0.94 5 14 0.34 5.1e+03 -1.6 1.3 7 13 472 478 472 479 0.83 6 14 1.2e-09 1.8e-05 25.4 14.6 1 19 506 524 506 524 0.99 7 14 0.75 1.1e+04 -2.8 2.4 5 10 553 558 553 558 0.96 8 14 0.016 2.5e+02 2.6 17.4 4 19 571 586 564 586 0.87 9 14 1.3 2e+04 -3.6 2.0 5 10 615 620 615 620 0.93 10 14 0.6 9.1e+03 -2.4 15.7 1 11 626 636 626 648 0.88 11 14 3.2e-10 4.8e-06 27.2 12.7 1 18 653 670 653 671 0.97 12 14 2 3e+04 -11.1 15.7 10 19 718 728 704 728 0.77 13 14 1.1e-06 0.017 15.9 13.1 1 16 764 779 764 790 0.85 14 14 9.3e-06 0.14 12.9 15.5 1 19 796 815 796 815 0.97
Sequence Information
- Coding Sequence
- ATGGCCACCTGGGATGGCTCTTATCAGGGCGGCTCGAGCGAGGATCCAAACTACCGCCTGGGTCAACCTCAATCCTCCTCTCAGGCATACTACAACTACAACTACCCCCAGACAAACGGATACCAAAATCCACCACCTTCCACTCATTTCGATAGCAATCGCTCGAGAAATCCTCCAAATTCCACTCTAGCATCCCAATCCAATCTCCACGCTGGGGCTGATGAATTTGTCCCCGCTGATCCCTCAAAAGTCTACTTTGCGGATAATCGAAACCGAAATACCAGGCCCAAAAGAGGCGGTCAATACATGCGTCAAGAGGATTACACGAGGAACTATCGAAGCGATAAAAATCGTCGACAAACCTCCAATCACTATTCGAACACCGATTACGATCAGAATTACGCCAATTATCCCGAGGACGATCCGCCGAATAACACGCAGTCCCCTCGAGGTGCTTACAGCAGTCGCCGTCCGCGTAGCCACGGAAGATTCGCCAACGATCGTTACAATCAATTTTCCCAATTCCCCCAATCCAACGATCAAACGCGCAGCTCAGATGACAATCAGAAGCTCCCGAAGTCTCGTCAGAAGTACAAAGACTACAGTGATGATCCACGCGACGAGACATACCGAAGAGCTCCCCAAAATGAGGAACCAATTCGAACTGATCGTCGTCGACGGCCCGATTACTACGAGGACAAGTCATCCTCATCTAGACGAGATAAACGAAAGCACTATCAGGAGTCAAAAGACGTAAATGGCTACCGAAATTATCAGGACAAGAGGGAGGACAAAAAGAGCGTAGATAGTGTTGAAAAAAATTGGAGAAAGGGCCAGAAGAAGCGAAGTGAAATGGAAGATTCTATGACGCAGAAGGACAGGCTTACAGATCAGTTGAATATAGGAAAACTAGAGTGCTTAGTATGCTGCGATCATATTAGGCAGAATGATGGAATTTGGGCATGCAATAATTGCTACCACGTATTGCACTTGAAGTGTATTAAAAAATGGGCAGAGTCTTCGCAGAGTGAAAGTGGCTGGCGATGCCCAGCTTGTCAGAATATGAATCTGGTTATACCTGATGAGTACTATTGTTTCTGTGGAAAAACAAGAGATCCAGAGTGGAATAGGCGTGATGTGGCGCACTCATGTGGTGACGTCTGTGGCAGAACTAGGACCAAGAACAGATGCATCCACAAGTGTACTCTGCTATGTCATCCTGGTAGTTGTCCACTTTGCATTGCAATAGTATCAAGATATTGCGGTTGTGGACGAACTTCCCAGAGTTTGGCATGCAGCACTGATGCAGATGTTGCTTGTGATGATGTCTGTGGAAAAGAGCTGAATTGTGGCGTGGACAAATGCGAGAAAAAGTGCCATCAAGATGCTTGTGGTGATTGTCCTAAGAAGGTGGAGCAAATCTGCCATTGTGGGAAAAATCAGCGCGAGGTGGAGTGCCAGAAAGGTGTGTCCAAGTTTTTCAGCTGTGGCGGCATATGCAGTAAGAAACTCGAGTGCGGTAATCACGAATGCCAGGAAGCGTGTCATTCTGGACCCTGTGCGAGCTGTCCCCTGCAGCCCAATGTTGTGACCCACTGTTGCTGTGGTCAGACTCCCCTAACCACTCCTCGCACTTCCTGTCTCTCGCCAGTACCAACCTGTGAAAAAACATGCTCCAAGCCCCTGCGTTGTGGCCAACCAAGTTCCCCACACAGATGCGCACATCCTTGCCATCCCAATACCTGTCCCTCTTGCCCCTCATCCACCTGGGTGAAATGTCGTTGTGGTAATATGGACCGAGAGCTTCCCTGCGCCGATCTCCGTAGCAAAGCGGATGATGCTCGTTGCGAGAAGAAGTGCACAAAAAAGCGTTCCTGCGGTAAGCACAAGTGCAATCAACACTGTTGCATTGACATCGAGCACATCTGCCCTCTGCCCTGCTCCAAGAACTTGAGCTGCGGTCGACATAAGTGCGAATTAACCTGTCACAAGGGCCGATGTCAACCGTGTTATCGAAGTAGCTTCGAAGAGCTCTTTTGCGAATGCGGAGCTGCAGTTATATACCCTCCAGTTCCATGTGGTACTAGGAAGCCCACGTGCTTTCGACCCTGCTCCAGACAACACTCCTGTAGTCATGAGGTCCTTCACCACTGTCACAGCGAGCCTAATTGTCCCCCTTGCACAGTCCTCACGCAAAAGTGGTGCTATGGCAAGCATGAGTTGCGAAAAGCCGTTCCATGCTATCTGAACGAGATGTCATGTGGTTTGCCCTGTGGCAAGCCAATTTCTTGCGGCAGGCACAAGTGCATCACTCTGTGTCATCCTGGGGCTTGTGAAAGAGAGGGCCAAGTGTGTGTACAACCTTGTACAACACCTCGTGAAATGTGCGGACATCCTTGTGCATCTACTTGTCACGAGGGCAAGTGTCCTGACACTCCTTGCAAAGAGGCTGTCAAGGTAACATGCACTTGTGGACATAGAAGTACAACAAGAGCTTGTGCTGAGAACTCCAAGGAGTATCAGCGAATAGCCAGTGGTATTTTAGCAAGTAAAATGGCGGATATGCAATTGGGCCATTCGGTTGATCTTGAAGAGGTATTTGGACAAGGTGCTAAAAAACAGAATCAGCTGAAAACACTTCCCTGCAATGACGAGTGCTCACTCATTGAACGTAATAGGAAGCTTGCACTTGGACTGCAAATTGTTAATCCAGATTTGAGTGGTAAATTACTGCCTAGGTACAATGAGCATATGAAAACTTGGGCGAAGAAGGATCCACACTTTTGCCAGATGGTTCATGATAAGCTTACTGAACTTGTACAACTTGCTAAGACTTCCAAGCAGAAGAGCAGAAGCTATTCTTTTGATAGTATGAATAGGGATAAGAGACAGTTTGTTCATGAGAGTTGTGAACACTTTGGATGTCAGAGCCAGGCGTACGATCAGGAGCCGAAGAGAAATGTGGTGGCCACTGCTGTTAAGGATAAGTGCTGGTTACCTAGTTATAGTTTGTTGGAGATGATTCAGAGGGAAAACGGCCAACGCAAAGTGCCGAGACCTATGCTCAATACTGTGAGGACCAACACTTTAACTTCTCGTACTTCAGAAGTGCTGCCATCAACTGCCAAAATGAGTCAAAAGCTCCAGCCAACAGCTGCCTCACGACGATCTCCAGAGCCAGAGATTGACTACTTCGACTTTCCAAACTCCAGATTCAACTAA
- Protein Sequence
- MATWDGSYQGGSSEDPNYRLGQPQSSSQAYYNYNYPQTNGYQNPPPSTHFDSNRSRNPPNSTLASQSNLHAGADEFVPADPSKVYFADNRNRNTRPKRGGQYMRQEDYTRNYRSDKNRRQTSNHYSNTDYDQNYANYPEDDPPNNTQSPRGAYSSRRPRSHGRFANDRYNQFSQFPQSNDQTRSSDDNQKLPKSRQKYKDYSDDPRDETYRRAPQNEEPIRTDRRRRPDYYEDKSSSSRRDKRKHYQESKDVNGYRNYQDKREDKKSVDSVEKNWRKGQKKRSEMEDSMTQKDRLTDQLNIGKLECLVCCDHIRQNDGIWACNNCYHVLHLKCIKKWAESSQSESGWRCPACQNMNLVIPDEYYCFCGKTRDPEWNRRDVAHSCGDVCGRTRTKNRCIHKCTLLCHPGSCPLCIAIVSRYCGCGRTSQSLACSTDADVACDDVCGKELNCGVDKCEKKCHQDACGDCPKKVEQICHCGKNQREVECQKGVSKFFSCGGICSKKLECGNHECQEACHSGPCASCPLQPNVVTHCCCGQTPLTTPRTSCLSPVPTCEKTCSKPLRCGQPSSPHRCAHPCHPNTCPSCPSSTWVKCRCGNMDRELPCADLRSKADDARCEKKCTKKRSCGKHKCNQHCCIDIEHICPLPCSKNLSCGRHKCELTCHKGRCQPCYRSSFEELFCECGAAVIYPPVPCGTRKPTCFRPCSRQHSCSHEVLHHCHSEPNCPPCTVLTQKWCYGKHELRKAVPCYLNEMSCGLPCGKPISCGRHKCITLCHPGACEREGQVCVQPCTTPREMCGHPCASTCHEGKCPDTPCKEAVKVTCTCGHRSTTRACAENSKEYQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLPCNDECSLIERNRKLALGLQIVNPDLSGKLLPRYNEHMKTWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNRDKRQFVHESCEHFGCQSQAYDQEPKRNVVATAVKDKCWLPSYSLLEMIQRENGQRKVPRPMLNTVRTNTLTSRTSEVLPSTAKMSQKLQPTAASRRSPEPEIDYFDFPNSRFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -