Basic Information

Insect: Asobara japonica
Gene Symbol: Prdm15
Assembly: GCA_017141405.1
Location: JADHZF010000010.1:1164401-1167127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.8e-05 0.0093 17.1 3.5 2 23 431 453 430 453 0.94

2 7 1.7e-06 0.00027 21.9 0.5 1 23 464 486 464 486 0.98

3 7 1.1e-05 0.0018 19.3 1.3 1 23 492 514 492 514 0.98

4 7 0.00032 0.051 14.8 0.2 3 23 523 543 521 543 0.92

5 7 4.8e-05 0.0077 17.4 3.7 1 23 552 574 552 574 0.97

6 7 2.2e-07 3.5e-05 24.7 0.3 1 23 580 602 580 602 0.97

7 7 2.8e-05 0.0045 18.1 0.4 2 23 613 635 612 635 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.8e-05	0.0093	17.1	3.5	2	23	431	453	430	453	0.94
2	7	1.7e-06	0.00027	21.9	0.5	1	23	464	486	464	486	0.98
3	7	1.1e-05	0.0018	19.3	1.3	1	23	492	514	492	514	0.98
4	7	0.00032	0.051	14.8	0.2	3	23	523	543	521	543	0.92
5	7	4.8e-05	0.0077	17.4	3.7	1	23	552	574	552	574	0.97
6	7	2.2e-07	3.5e-05	24.7	0.3	1	23	580	602	580	602	0.97
7	7	2.8e-05	0.0045	18.1	0.4	2	23	613	635	612	635	0.95

Sequence Information

Coding Sequence: ATGGAGGCGTCGGATATACAGGCAATTTTAGAAGACAAGGATGTAGATATGGAACAACGCGAGGAGATTATTTACGCTGATCAAGAGGAGACCGAGCAACTTGAGCAGCTTGATGAGCTTGATGAGCACACTGAAGAAATTGTTGAGATAATTGAGGAAATTGAAGTTATTGAAGATGAAGAGGAGGATGAGACGGAGGAGGCAAGTGTCACTGAGCTTCAAAATGTCACTAAAAAAGAGGAAACTTTACTAGAGTCCCAGGAGGGTAACAGTCAGGAAGAGGAGGAGGAAGTGCTGGAAGAGGGAGAAGAGGAAGTGGAACAAACGAATTTGCAAAGTAATGAGAGGAGGGAGAAAGGTAAGAAAGTCATGACTTATGATGCTGAGGACGATTGGGAAGACGAGGAGAACGATCCTTTGGAGACTGGACGAGCTGGAAAATCTAAAAATTCAAATGTGGCAATGAGGAAAGTCACGGTTAATGGGAATAGGGGGGATTCAAGTGTAAATGGAGAGCAACAGGAGTACGAGCCTCCTAGGACTCGAGCCAGAGCTACTGCTGTAGAGTATCAGACCGAAATGAAAATTCCCAGGCATGATGATGATGACGATAATCCTCATGAAATTGTAAAGAATATTGACAATGATTTGATCTATACGGTTCTTGGATCTAAAAAGCCCCAGGAAGTGAAGAATTCGCAAGAGCGTCCATCTTACATAAAGATGGAGAAGTTAGAAGAAGATACAATTCCCATTGAGGGGACAATTTACTATGAGGGAGATGATATGGGAACATTATATGTTGCTCACACCATGAATGAAGGTGAACAATATGAATTAGAAGGTGAATCCGTAATGGAACAAGAGGAGCAGCAAATTGAACAACCTGAGCAATGGGACGGATCGAACCAGATTATGATGGCTGAGGAAGAGACAGAGCAGGAAAATGTACAGGACCAAATATTTCTACATGAAGATGAGGACGGCCAGTTGTTTTTCAAAGACGAGAATGGCCAGATGCAGCCAGTTTACCTGACTGAAGATGGAAATTATGCAATAGCCAGCAACAGCAGTGATGAACAAGAGGGGCATGAGGGAATGAATAAGAAAATTATGGAGGATGAACAAGATATGGAAACAATTACCAATAGACAGACCTCGATGTCTCCATCTGCAATGAACAATGATCCAGATAACGAGGATAACACAGTAACAATTTCATTAATAATCTCAGAGGATGAGAATGGCTTAAAGAGAACCCAAGTAATAATTCCCACAGCAGATGCCCTAAAATGTCAACTCTGTCAAAAGACATTCAAAACTCAATTTCAATTGCTAAGACACAATAGGCTAAAGCATGCAAGTGAGGATGACATTACAGTGAGGAATTTCCCCTGTGATTTGTGCCCCAAACGCTTTCCTGATCAGAATACATTAGCCAAACATAGGAAAACACATACAGGGGATCGACCATTCCAGTGTCTCGAGTGTCACGAACAATTTCCAACTGCCAATTCCCTTCGACGTCATATGATTCAGCACAATCCTGATTCTAAACCTCTGCCATGTATCTACTGCGGCAGAAGATTTATCGATAAACCAACATTGCAAAAACACGAACAGTCTCATCTTGCTGCTGAACAACAGCGTGCACATACATGTGACATATGTCATAAAACATTTATCACTGCTACTGATCTTTCAGTTCATAAGAAAAATCATGATCCTGATAAAAAGTTTGATTGCGAGGTTTGTGGACGTGAATTTAATCGTCTTAATAATTTACAACGCCATATGCTTGTACATCAACAGCAAGGACAAAATCAGGAGATATTGTCCTGTGACGTATGTGGGATAACTTATAAATTCATGAGTTCCCTTACAAGACATATGGTCACGTCCCACATGAATCCAGAAAAATTACGACAACAGGCTGAGGAGCAGCGACGCAAACGAGAGAATAATTATAAACGGTATCTGGAGAATCGTAAGATGTACGAGACTCAGCACGTTCCAGTGTACGGAAAGCGCATATGCAGAGGTGGAGTTAGTGATGATCCCGACGATGATTTAGCCTGA
Protein Sequence: MEASDIQAILEDKDVDMEQREEIIYADQEETEQLEQLDELDEHTEEIVEIIEEIEVIEDEEEDETEEASVTELQNVTKKEETLLESQEGNSQEEEEEVLEEGEEEVEQTNLQSNERREKGKKVMTYDAEDDWEDEENDPLETGRAGKSKNSNVAMRKVTVNGNRGDSSVNGEQQEYEPPRTRARATAVEYQTEMKIPRHDDDDDNPHEIVKNIDNDLIYTVLGSKKPQEVKNSQERPSYIKMEKLEEDTIPIEGTIYYEGDDMGTLYVAHTMNEGEQYELEGESVMEQEEQQIEQPEQWDGSNQIMMAEEETEQENVQDQIFLHEDEDGQLFFKDENGQMQPVYLTEDGNYAIASNSSDEQEGHEGMNKKIMEDEQDMETITNRQTSMSPSAMNNDPDNEDNTVTISLIISEDENGLKRTQVIIPTADALKCQLCQKTFKTQFQLLRHNRLKHASEDDITVRNFPCDLCPKRFPDQNTLAKHRKTHTGDRPFQCLECHEQFPTANSLRRHMIQHNPDSKPLPCIYCGRRFIDKPTLQKHEQSHLAAEQQRAHTCDICHKTFITATDLSVHKKNHDPDKKFDCEVCGREFNRLNNLQRHMLVHQQQGQNQEILSCDVCGITYKFMSSLTRHMVTSHMNPEKLRQQAEEQRRKRENNYKRYLENRKMYETQHVPVYGKRICRGGVSDDPDDDLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -