Ajap023274.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- ZFX
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000030.1:397295-402319[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1 1.6e+02 3.8 0.1 3 23 15 35 14 35 0.94 2 15 3.6 5.8e+02 2.0 1.2 1 11 846 856 846 869 0.78 3 15 0.0085 1.4 10.3 0.3 2 23 953 975 952 975 0.95 4 15 0.00076 0.12 13.6 0.1 2 23 988 1009 987 1009 0.97 5 15 1.2e-05 0.0019 19.2 3.1 2 23 1012 1033 1011 1033 0.97 6 15 0.0014 0.22 12.8 0.3 1 23 1039 1061 1039 1061 0.97 7 15 2e-05 0.0032 18.6 4.5 2 23 1068 1089 1067 1090 0.95 8 15 0.088 14 7.1 3.7 5 23 1103 1121 1102 1121 0.97 9 15 1.8e-05 0.0028 18.7 1.5 3 23 1128 1149 1127 1149 0.97 10 15 0.023 3.7 8.9 0.5 2 23 1165 1185 1164 1185 0.97 11 15 5.4e-05 0.0086 17.2 0.7 1 20 1191 1210 1191 1213 0.92 12 15 4.6e-05 0.0074 17.4 2.6 1 23 1221 1243 1221 1243 0.99 13 15 0.0019 0.3 12.4 3.2 1 23 1249 1271 1249 1271 0.97 14 15 3.4e-06 0.00054 21.0 3.9 1 23 1277 1299 1277 1299 0.99 15 15 0.00024 0.039 15.1 7.2 1 23 1305 1327 1305 1328 0.96
Sequence Information
- Coding Sequence
- ATGGATTTAAATCTAGCATCAGACACAGGTGGTGCTGTGGCCTGTCCAGTTTGTACCCTATACCTCCGTGAAGGTATAAGTTTGCAGCGCCACTTGGACACCCATCCAAAAGAGCAAGTGATAGAAGCACTGATAAAAGCAAGTAGTACTAGCAATGGATCTAGTATAAGTCCAGCGCTGCCGCCAGCATCGCCCCAGCTACCTCAGGCACCAGGTCCCCCAGTGACCCCGGTCACCCAGGTCAGCCCACCACACTTGCCCCAAAATCAATCACACCTGCCCCAATCAACATATCCAATAGCACCAGTCTTCGAATATCCACCAATGAACACAATGATGCCACCCCAATTCGCCTCATTCAGCTATCAACAATTTGTCAATAATGGTACAATGATGATACCACAGTATTCAATACCACCGCCACCCCAGGCAAATCAAATGATGCAAATGCTGTATAATCCTTACAGTATGTATCAGCAGCAACAGGTACATCAAGTACCAACAGTACAAATGTTATCACCAGTAACAACAATTCCAACAACTAGAATAAGACCAGTTAGTGTTGCTGATAATAGTCCAAGAACTATGATAATACCTGGTGAAGAGTCTGGTGGTGATGGCAAGCAAACTATACCGGATATGCCTGTTATACCTGGTGGTGATAATGGCTTACCTGATATGGCTGACAATCAGCAAAGTATTCTACCGGATATTGGTAATTCGGAGAGTATTTTGCCGGATATTGAAGCGGCTGAAAGCGAAGGGACAAATGGGAGGAGTGAGGAGAGACTGGACAGGGATCAGACCATTGCTAATCGTAGGATAGAACCGGAAGTTGGAAGAGATGATGGTAATGATGAGGAGCAAGAGACTGGTGGTGAATGTATTGTGCCGGAGATTGAGGAGCCCAGGGATGAGATTTTGGAAAGATTTACTGGGTATGGTAAAGATGAGAGGATTGATAGCAATGATAGTGTTGAGAATGATGAACCAAGTGAGAGTAATGGTAGAGGTGAGATTGTTGGTAAGGACAAATGCCAGGATGAGAAGATGGAGGAGGCCCAGTCGAATTTGTCAATGCAATCAGTACCCAATGATGATGGATTTATGGAGGAGAGCAATAAGAATGATGAGGAATTGAGGGAGATCCACCATCATGGGGTTGAGCATTTGGAGAGATTCCTTATGAATATGATGGAAGCTAATCTTGATAGGGGTGAATCTTTGAAGGCTGAAGAAGGTGGGGATGGTCTTGCACCTGAGGACATGCAGATTTTGCATGACGTTCAAGAGGATGTTCCGTTGGATTTGCAGACATGCCAGAGTGAGGAGATCTTGGAGAATTTTAAAGGGTTATCACCTTACAGGTACAGAAGCAGTCTAAGTGCTCCAGGATCTCCAGCATCCCGTAAAAAGCTCAAAATCCATCAGGCTTACTCCAGATCAGAATGTAATCTATGTGGATCCAACGAGAATCTAAATGTCTACCCAGTTGGATTCGAAGCATCAGCTCTGCAGGAAGACCTGCAGGATGATCTTGATGAAGATCCTGATGACGAACTTGATGAAAAAACTATGCCCGACAATTTCGAAGAAGAAGACATGGAGATTGAGGAGATTGCAAGTCCCCATACACCTTTTATCAAGCGCATTAAGGAGGCAAGATCTCATACTCCACTGTCAGTTATCAGTGGTATATCTGGGCTTAGAGTAAGGAGTAGTATTAGCAAACCAGGATCACCAACGTCCATGCAGTCATTCAGATTGAATGAGACTGATGATGATGTTAGCAGGGACCAGCAGAAAAATCCTCTAGACTGTTCACAAGCTGAGAGTGAAGTAATTCGGGATAAACGATTTGAAGATAATCATCAATCGGTTATTACTGAACATGTTAGCTCATTTCCTGCTATTCACACAAGTGGACAAATTGAGGCGCATAACTATATGTCGAGTAAGAGCCAATTGCAGGATCTTGGTATTGAAATGGATCCAACAACTAGTGCTGAATCCAAAAGCTTTCAATCCATCAATTTGGCTAAGTGCGTTAATCAACTACCCACAGCTGAGTTGTTGAATATCAATGAGGATGCACATTCTGGACCAATGAATGTTTTTGAGTTTGATGGACTTCAGATTCTGGTGCCTAGCACATTCATCAGTGAATCCAGTCAGAAGGCTATCAGTGCTACTAGTCAACAGTCTATGGCGAGTAGCGAAGGGGGTGGAGGTATTGATGAAGAGGTGAAGAGTGTCAATATGAGGGCTGATGAGACAATGCCACCTAGGGGAGAACTTTCCGAGCAGGAGAGCAATGGGTGTACAGAACATTCTGCTTGGCAGCTATACGTCGGCCAAGAGTCCTCGAGAATGTCTACCTCCTACGATTTGATGGCACGTGAATCCTGGGAGGAGTCAGAGGGCTCAGACAATGAGTCTGGTGTGCCCCTCCTGGACAGTCGTTCCCTAGCTACCCACTTCACATCGTCCCTCTTCTTAGATCGCGATCGCAAGACACCCACCAAAACGCGAACGTTCAAATGCTCATTGTGCACAGAGGTCTTCGATTGTCCTAAAGAGCGTAGAGTGCACAGTACCGCGGTGCATAAAGAGGCGGGACCTTCTAATAGCAGTAGCACCAGTGGACCTCCTGAAGTCCAAGAGGCTAAGGACATTAAGCTGCTGGATGGAAGGATGAATGTGTTTGAGGATATATTTGTACCTGGCATTCATGTTAGTCCAAATTATCCTAATCAACAGCAACCCCTGCTGCATCAGCTCCAGCCCCCACAGCAGCCTTCGGATTTGTCGAAACCTGATGATGAGAAAATTGAACCACCCACGACCCTTGAAATCTCTTGCGCAATGTGCGCTCAGCGTTTTTCATCCGAACGTTCATTACAGGTGCACAATCGTCGGGTCCACGGTACAGAAGTAGCCAAGCGTTTGCACGACATCTCAAAATGCCAAATCTGCAACGAAGAATTTCCCTCAGTTGTCCAATTCAATGCCCACTTAAAGATCCACCCATTGGAGTGCTCCCAGTGCGGCAAGTACTTCTACCGAAAGCAAAATTTTAAACTACACATGAAACGCCATTTGGGAATCAAGCCCTTTCCCTGCACCGTATGTGACAAGGCATTTTTGACAAAGCAAAAGCTCGACGAGCACATGAATGGTCATACGGGTAATGCGCCAGTTAAATGCAATTTGTGCAATGAAACATTTAGGCGTTATTCAAACTTGACACAACATAAAAATCGCCATCACTTGAATATTAAACGCAAATTGAAGGACTATATATGCCACTGTGGTGAAGTGTTTCACACGAAGAAGAAGTTAGCTTGGCATAAGGAGACACACGATGAAAAGCCAAAAGCTTGTACGTATTGTAACGAAAGATTTATACATATGGCAAGTTTAACAAGGCACATGAGGCGCGCCCACAATAAGCGTTTTGTACCCGATGCACAGCGTGAAAATGAAAATGTTGAGTGTCCAATATGCAAGTGTATTTATCTAAGATCGTCACTCTCTGTTCATATGAAGGTGCACAATGGGGAAAGACCATACGAATGTCAAGTTTGCTCAAAAGCATTTAGTACAAAATGGAATTTGCAATTACATAAGTGGACACATGCAGCTAGAAGCACTAAGCCTTATAAGTGTAATCAATGCAGTGCTGCATTCTATCGGCATAGTGATTATACTGCCCATATGAATTCACATAGAAATGTTAGGCCGTATACTTGTAATTATTGCGGTGCGCAGTTCATTAGGAAGTATAATTGCTTGAGACATGTTAAGGAGCATGAGGAGAATAAGCAGTATACTTGTGATGTTTGTAATAAGACATTTCATAGGTCTTATTATCTTAAGGAACATTTGAGGGTGCATAGTGGAGCGAGACCTTATACTTGTCATATTTGTGGGAAGAGCAGTAGTACTAAGAGCAATCATAATAAGCATGTGAGGATACATCATGCTAGGGAACCAGTTAATACGGAAAATTGA
- Protein Sequence
- MDLNLASDTGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSTSNGSSISPALPPASPQLPQAPGPPVTPVTQVSPPHLPQNQSHLPQSTYPIAPVFEYPPMNTMMPPQFASFSYQQFVNNGTMMIPQYSIPPPPQANQMMQMLYNPYSMYQQQQVHQVPTVQMLSPVTTIPTTRIRPVSVADNSPRTMIIPGEESGGDGKQTIPDMPVIPGGDNGLPDMADNQQSILPDIGNSESILPDIEAAESEGTNGRSEERLDRDQTIANRRIEPEVGRDDGNDEEQETGGECIVPEIEEPRDEILERFTGYGKDERIDSNDSVENDEPSESNGRGEIVGKDKCQDEKMEEAQSNLSMQSVPNDDGFMEESNKNDEELREIHHHGVEHLERFLMNMMEANLDRGESLKAEEGGDGLAPEDMQILHDVQEDVPLDLQTCQSEEILENFKGLSPYRYRSSLSAPGSPASRKKLKIHQAYSRSECNLCGSNENLNVYPVGFEASALQEDLQDDLDEDPDDELDEKTMPDNFEEEDMEIEEIASPHTPFIKRIKEARSHTPLSVISGISGLRVRSSISKPGSPTSMQSFRLNETDDDVSRDQQKNPLDCSQAESEVIRDKRFEDNHQSVITEHVSSFPAIHTSGQIEAHNYMSSKSQLQDLGIEMDPTTSAESKSFQSINLAKCVNQLPTAELLNINEDAHSGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGGGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNESGVPLLDSRSLATHFTSSLFLDRDRKTPTKTRTFKCSLCTEVFDCPKERRVHSTAVHKEAGPSNSSSTSGPPEVQEAKDIKLLDGRMNVFEDIFVPGIHVSPNYPNQQQPLLHQLQPPQQPSDLSKPDDEKIEPPTTLEISCAMCAQRFSSERSLQVHNRRVHGTEVAKRLHDISKCQICNEEFPSVVQFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNKRFVPDAQRENENVECPICKCIYLRSSLSVHMKVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPYKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKQYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -