Basic Information

Insect: Asobara japonica
Gene Symbol: -
Assembly: GCA_017141405.1
Location: JADHZF010000008.1:482274-484402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.31 50 5.4 0.8 2 23 167 188 166 188 0.96

2 11 0.00036 0.058 14.6 0.3 2 23 193 214 192 214 0.96

3 11 7.1e-05 0.011 16.8 0.8 3 23 229 249 227 249 0.95

4 11 2.3e-05 0.0037 18.4 0.2 1 23 316 338 316 338 0.99

5 11 1.4e-06 0.00022 22.2 0.9 1 23 344 366 344 366 0.96

6 11 0.00014 0.022 15.9 0.8 1 23 372 394 372 394 0.97

7 11 4.3e-06 0.00069 20.6 4.7 1 23 400 422 400 422 0.98

8 11 1.2e-07 1.9e-05 25.5 0.9 1 23 427 449 427 449 0.97

9 11 0.00043 0.069 14.4 1.7 1 23 455 477 455 477 0.97

10 11 9.1e-05 0.015 16.5 1.7 1 23 483 505 483 505 0.94

11 11 4.9e-06 0.00078 20.5 1.6 1 23 511 533 511 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.31	50	5.4	0.8	2	23	167	188	166	188	0.96
2	11	0.00036	0.058	14.6	0.3	2	23	193	214	192	214	0.96
3	11	7.1e-05	0.011	16.8	0.8	3	23	229	249	227	249	0.95
4	11	2.3e-05	0.0037	18.4	0.2	1	23	316	338	316	338	0.99
5	11	1.4e-06	0.00022	22.2	0.9	1	23	344	366	344	366	0.96
6	11	0.00014	0.022	15.9	0.8	1	23	372	394	372	394	0.97
7	11	4.3e-06	0.00069	20.6	4.7	1	23	400	422	400	422	0.98
8	11	1.2e-07	1.9e-05	25.5	0.9	1	23	427	449	427	449	0.97
9	11	0.00043	0.069	14.4	1.7	1	23	455	477	455	477	0.97
10	11	9.1e-05	0.015	16.5	1.7	1	23	483	505	483	505	0.94
11	11	4.9e-06	0.00078	20.5	1.6	1	23	511	533	511	533	0.98

Sequence Information

Coding Sequence: ATGAAAAACGAATATTCCGAGGTTATATCACCAAAGGGAATAATGGAAGACCACTTTATGAGCGTCGCCCTAAAAGAAGAGCCCGATAACCTATTGCAGAATGCTTATATCGATGAGATTTGCGCATCTCCGTATGAGAAGGTATTCCTGCCCAACGAGAACCACGAAGTCAACTTAGATGAAATGGTTAAACTAGATTTGGTGGAACAGAACATGAGTCATCAAACGTGGGTTCCCCAAATCGCGGATGCGAACCCCTCTTCTTGCAAACTAACCATGAACAGCGAGATGATTCCAAAGGTCGAGCAAGCGGAGGAAGAAGACGGAGGCGAAGAAGAAGAACTACAGGAACAAGAAGATCTCAAATTAGAAGAGCCATTCGAAGAAGGTGATGAGGATTCTGAAAAATTGCAACTAACAATATCAGAGAATACCGAAGAGGCTTTGAACTGCGAAGACACTCCTAATAGCCCCCACTCTTCAAAATTCTACAAAATTCAGTGTACATTGTGCAGCAAGTGGTTCCTAAACAACAAGTCGATGATAACCCATCTTCGACTACACACCACTTCCCTTACATGTCAAATTTGCCAGGAACAATTCACAGATGATGAAACTCTCTTTTCTCACATGCTTGAACATATGCAGCCCAACGGCTCCAACGAAACGAAAACTCTTCTTGATTGCGCAATCTGCGATAAGGTGTTTGCATTTCGATATTGTCTTCGAAATCATCTACAAGCACATTTAAATCAATCGTTGACCGACTCCTGTGCTTGTTGTCACAGTGTTCAAGAAGATCTCGATAATTCTGCCGCAGGGAAAGTGCCCTGTAAACTATGTGAGCGAAATTGTAGAGACGGACCTTCAGGAAACAAATCCAATCGAGAGCTTGGATCAAAGAGAAAGATCGCCAACAATAAATCTGAAAAAGGTGTAAAACCATTCCGTTGTGCGCTTTGTCCCCTTTCTTTCGCTCAAAGAACACCTTTGAAGAATCATATTATGACGCACAGTGAGATGCGACCATTTGCATGTAAAATTTGCAGTAAAACTTATAAAAGAAATTCAGAATTGATTAGGCACTCGATGATTCATACTGGTGAGCGTCCTCATGAATGTAAAGAGTGCCTCATGACATTTAGAGAGAAGGCTAAATTGAATGCGCATATGGTGGTTCACACAGGTGAAAAACGTTTCCAGTGTCACATTTGTCATAAATTCCTCGCCAGAAAATCTGACTTGACCAGTCACATGCTGTCGCACACCGGTGGCCAGTATGATTGTCAAATCTGTGAGAAAAAATTCACTAGGAAATCTGATCTTACTCGACATGTACTTGTGCATACGGGAGAAAAACCTTTCGCTTGTGATCTATGTCATATGGCGTTTAGGGAAAAAACGAGACTCAATAATCATTTGCTGACTCATACTAGAGATAAAAAACATGCCTGCCGAATTTGTGAGAAGAAATTCAAAGATAGACTAGGCCTGAAGAAACATATGATAGATCATGCTGGAGATAGACCGTATGAGTGCTATGTTTGTCAAAAAAATTTTAAAATGAAGAGTACTTTGTTGACTCATATGCAGGTTCATGAAGAAGAGGAAAGGGTGGGAAACCATTTCTTGGAGTTTCAAGAAGAAAATATGGAGGTTGAGTTGCAGGGGGAGGATTGA
Protein Sequence: MKNEYSEVISPKGIMEDHFMSVALKEEPDNLLQNAYIDEICASPYEKVFLPNENHEVNLDEMVKLDLVEQNMSHQTWVPQIADANPSSCKLTMNSEMIPKVEQAEEEDGGEEEELQEQEDLKLEEPFEEGDEDSEKLQLTISENTEEALNCEDTPNSPHSSKFYKIQCTLCSKWFLNNKSMITHLRLHTTSLTCQICQEQFTDDETLFSHMLEHMQPNGSNETKTLLDCAICDKVFAFRYCLRNHLQAHLNQSLTDSCACCHSVQEDLDNSAAGKVPCKLCERNCRDGPSGNKSNRELGSKRKIANNKSEKGVKPFRCALCPLSFAQRTPLKNHIMTHSEMRPFACKICSKTYKRNSELIRHSMIHTGERPHECKECLMTFREKAKLNAHMVVHTGEKRFQCHICHKFLARKSDLTSHMLSHTGGQYDCQICEKKFTRKSDLTRHVLVHTGEKPFACDLCHMAFREKTRLNNHLLTHTRDKKHACRICEKKFKDRLGLKKHMIDHAGDRPYECYVCQKNFKMKSTLLTHMQVHEEEERVGNHFLEFQEENMEVELQGED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -