Basic Information

Insect: Asobara japonica
Gene Symbol: -
Assembly: GCA_017141405.1
Location: JADHZF010000001.1:5029806-5034913[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2e-05 0.0032 18.6 0.7 1 23 150 172 150 172 0.95

2 15 0.00074 0.12 13.6 1.1 3 23 180 200 179 200 0.99

3 15 6.4e-05 0.01 17.0 0.0 1 23 298 320 298 320 0.98

4 15 0.061 9.8 7.6 0.1 1 23 326 349 326 349 0.97

5 15 5.9e-05 0.0094 17.1 1.8 1 23 374 396 374 396 0.98

6 15 1.4 2.2e+02 3.3 0.0 1 23 412 434 412 434 0.86

7 15 0.21 33 5.9 0.1 2 23 441 463 441 463 0.96

8 15 0.0031 0.5 11.7 3.0 2 19 471 488 471 492 0.95

9 15 0.00015 0.025 15.8 3.5 3 23 500 520 498 520 0.97

10 15 0.011 1.8 9.9 0.1 3 23 527 547 526 547 0.97

11 15 6.4e-06 0.001 20.1 0.4 1 23 556 578 556 578 0.98

12 15 0.0028 0.45 11.8 0.2 3 23 586 606 584 606 0.97

13 15 0.0025 0.4 12.0 0.2 3 23 614 634 612 635 0.94

14 15 0.035 5.6 8.4 0.0 1 23 649 671 649 671 0.93

15 15 0.0056 0.9 10.9 0.0 1 20 1045 1064 1045 1067 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2e-05	0.0032	18.6	0.7	1	23	150	172	150	172	0.95
2	15	0.00074	0.12	13.6	1.1	3	23	180	200	179	200	0.99
3	15	6.4e-05	0.01	17.0	0.0	1	23	298	320	298	320	0.98
4	15	0.061	9.8	7.6	0.1	1	23	326	349	326	349	0.97
5	15	5.9e-05	0.0094	17.1	1.8	1	23	374	396	374	396	0.98
6	15	1.4	2.2e+02	3.3	0.0	1	23	412	434	412	434	0.86
7	15	0.21	33	5.9	0.1	2	23	441	463	441	463	0.96
8	15	0.0031	0.5	11.7	3.0	2	19	471	488	471	492	0.95
9	15	0.00015	0.025	15.8	3.5	3	23	500	520	498	520	0.97
10	15	0.011	1.8	9.9	0.1	3	23	527	547	526	547	0.97
11	15	6.4e-06	0.001	20.1	0.4	1	23	556	578	556	578	0.98
12	15	0.0028	0.45	11.8	0.2	3	23	586	606	584	606	0.97
13	15	0.0025	0.4	12.0	0.2	3	23	614	634	612	635	0.94
14	15	0.035	5.6	8.4	0.0	1	23	649	671	649	671	0.93
15	15	0.0056	0.9	10.9	0.0	1	20	1045	1064	1045	1067	0.94

Sequence Information

Coding Sequence: ATGGACGTGCCAAGTGACCTTACCCTCCAATGGGTGGAGGAAGTGGGCAATGTCATCCACGAAGAGGTCATTTGCGGGCTCGAAGCTGACCTGGAGACTCAGGAAGGCGAGGTCATTGGTGCCTGTGAAGAGGTATGCATTGAGGAGGACATTCAGGAAGGGTCCGAGCAGGAAACCACACACAGTTTGCCACCTGATACGGAAATTCTAATGGTTCCACAATCCAGTGATATGGAGTCGATTTACATTGTTCCACAGGATCAGGGACATGATTATCTAAACATACAGGTCACTGAAGAAGTCATCACTGATAATTGGGATAGATCTGGACCGGATGATGGTGTCGAGATTCCCGAGACCAAAGTATCTCACGACAATCTCCTGGAGTACGACGACATGGAGATTCCCTTACCAATCGACCAAGACTCCTACACAAATACAAGACCTTATCCCTGCGACTTTTGCAGTCGTCGCTTTCGTAAAAAAGCTAATCTAATGAATCACATGGTTGCTCATCAAACGGATCGTCCACACGGTTGCAACTTGTGTGGTGCGCGTTACGTACGCAAATGTGATCTAATGAATCACTTAAAAATTCACGCATATGCACCACCTCGTGACGGCCTTGACGATGATTTACAATCTGAGGAGTTGCCCGATGATGACGAGCCACCGAAGGGCCGTCGAAAAAAGCCCCAAGCTCCACGAAAACGTAAGGCCCTACAAAAGCGCCCAATGCATGCGCTGGATGCCCTCGATTCCGACAAATCGCCTCAATCAAAGCTACAAAAGTCATTTGACTATGTTGATGAGGATATGCGGCTTTTGGAGGAAATGACAAGTCGTCCTAATTCATCACCACGTTGGCCAATAACTGATCCCACTAAACCTTATGTGTGTCAATATTGTGGTGTTGGTTTTGCACGGGAAAAAGCATTGGCATCACACGCCAGAATTCATGGTGGTGATAGCCCATTTGAGTGCACCAATTGTGGCGATATGTTTTGGGATGTCAATGCATTGCGGGAACATATACGAATTAAGCATGGTGTTACTTCACCAATTGATGAGTTTGAAACAACGGAGACTACTTATACTGGTGATGATAGATTTGGAGAGTTCTACTGTGAAACTTGTGGTGTACCATTTCACAGGCTGGATTTGTTGAAGAGACATAGGAAGGTGCATGTTAAGCAGGAGGCTGGGGCAGAACAGGTCGATGCTGGGAACCACCATGTTTGCAATGTTTGTGGAGAGTGGTTCGAGGAAGCGCTAGCTCTACTTGCACATGCGGAGCTTCATGCGAGATCTCCCACGAGGCGTTGTTTGCTTTGCGGCGAACGTTGTAGGGACGACGCTGAGGTGGCAGAGCACGTGAGAATAGTCCATGGAGATGATGCGCCACCGAATACCTGCACACTCTGCGGAAAAACGTGCAAGGATAAGAGAAGCCTTCTGAAACACTCTTGGGTGCATAATACTGATAAAACGTTTGGTTGCACGAAGTGCGGAAAAAGATTCCACTCGAAGGCGAGATTGAGGAGACACATGGTGAGCCACAGGAACAAAATGGTGGCGTGCGATGAATGCGGGGAGGAATTTCCGGATGGGAGGGCCCTGGTGTCGCATAGGCACTCGCATAATAAGGAACTCGGCGGCAGATCATTTCCTTGCAGGGAATGTGGCAAGACTTTTGGCAGCAGGAGCTCCCAACAGATTCATATTAGGATTCATACGGGGGAGAGACCCTATGGGTGCAGATTCTGCTGGAAGGCCTTCGCTGATGGTGGCACTCTGCGCAAACATGAGCGAATTCATACGGGTGAGAAGCCCTATGGTTGCGCAATTTGTCCAAGGGCATTTAATCAACGAGTAGTTTTGCGAGAGCACGTGAGAGCCCATCATTCGGGCCCCGATCCCAAGTGCCACGGCAGCATGACTCCCTATTTGTGCAAAGTCTGTGGGGACTCATTTGCCACATCTGAAGAGATTATTCTACACATTGTTCAGCATTGCGATGACAATACGGCCCTTCGACGACAGCCCCAAGTTGGGCCGCGCAAATATAAACGCAGGAGGAAACTGAAGCCCCACGAGAGCCCCATAATACCGCAAAGAAGTGACTTTGAGATGGGAGATGGATCAGATTCAGACGAAAACAGTAAGCGTAAGAAGAAAAGTAGCAAAAGAGCCATTGATGAGGGGTACCAATCGGTGCTCAAATCTTTCGAGAGCTCGATTCAAAATATCAACTCGATTGTTAGCAGTACCAAGGCCAGCAAGAGTGGAAAGGTAAAAAAGAAGGTTAAGAAAGACGAGAAAAAAATCCCAGAAAGTAGTACCACTTCTAATTCGGGCCGCCCAAAGATGATCCACACCCAAAAGACCCGAGTTCCTGTTGAGGTTGGTTCTGATGGCGCCAAGAAAGGTCAAAAGACCAAAACAATGGTGACACGAACGCCGAAAGTGATGCCCGGTGAGAGAGGCATTTTTCCCGGAGGCGAGAGAAATAGACCGCGAACAAAAAACGTTAGTTATCATATCGACGGCAGAAATATCATGCCCGCAACTTTCCCAACGAAGACCTTAGATGTTCCTGAGGTACCCGAAATTCCGGATGTGCCGGAATTGCCAGATGAGCCGGAAATGACAGCCATTCCGGAAACTCCACAGATTGCGCGACCAATGCTCAATGAGTTTGTTCCGATTGCGGTAAAAACTGAGCCCCACATGACCACCCGACGATCAGCTGCTAATCAGATTAATCCGTCAAATGGTGCCAGCCCAGATCTGAGGGAAGTTGAAGCTAAGAAGAAGGCGAAAAAAGGGAAGAAGGTCGGACGGCCAATCAAACAAGAGCCGCATGAGGAGCCCATAGTAATAGAGGAGCATATTCCGGAAGAGCCAATTCATGCAGTGCTCGACGATGTGCCACAGGTTGCAGAAGAAATGGAAGTTGGATTTGAGGAGACCGTCGAGGAACACGGCGAGAGCATTCTTCCAGATCTGGAGGATGTTAATCATGAAGTTATTGTGCCAGAGCGAGTTAGTCTCAGGGTTAAAGTTGAACCTGCAGCTACTCGGAGGCTCCTTATGCACGTACCCGAGACAATTATTCCAGATACCCTGGAGTATACCTGCGAAATGTGCTCAGCTGTATTCGCCAGTCGAGCCGAACTCCTTGTACATGTACCTATACATATTTGA
Protein Sequence: MDVPSDLTLQWVEEVGNVIHEEVICGLEADLETQEGEVIGACEEVCIEEDIQEGSEQETTHSLPPDTEILMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPPRDGLDDDLQSEELPDDDEPPKGRRKKPQAPRKRKALQKRPMHALDALDSDKSPQSKLQKSFDYVDEDMRLLEEMTSRPNSSPRWPITDPTKPYVCQYCGVGFAREKALASHARIHGGDSPFECTNCGDMFWDVNALREHIRIKHGVTSPIDEFETTETTYTGDDRFGEFYCETCGVPFHRLDLLKRHRKVHVKQEAGAEQVDAGNHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRIVHGDDAPPNTCTLCGKTCKDKRSLLKHSWVHNTDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGDSFATSEEIILHIVQHCDDNTALRRQPQVGPRKYKRRRKLKPHESPIIPQRSDFEMGDGSDSDENSKRKKKSSKRAIDEGYQSVLKSFESSIQNINSIVSSTKASKSGKVKKKVKKDEKKIPESSTTSNSGRPKMIHTQKTRVPVEVGSDGAKKGQKTKTMVTRTPKVMPGERGIFPGGERNRPRTKNVSYHIDGRNIMPATFPTKTLDVPEVPEIPDVPELPDEPEMTAIPETPQIARPMLNEFVPIAVKTEPHMTTRRSAANQINPSNGASPDLREVEAKKKAKKGKKVGRPIKQEPHEEPIVIEEHIPEEPIHAVLDDVPQVAEEMEVGFEETVEEHGESILPDLEDVNHEVIVPERVSLRVKVEPAATRRLLMHVPETIIPDTLEYTCEMCSAVFASRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00048143;
90% Identity: -
80% Identity: -