Basic Information

Insect: Asobara japonica
Gene Symbol: -
Assembly: GCA_017141405.1
Location: JADHZF010000010.1:2857723-2860304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0013 0.2 12.9 0.4 2 23 126 147 125 147 0.96

2 11 0.015 2.4 9.5 4.3 2 23 200 221 199 221 0.92

3 11 2.1e-06 0.00034 21.6 4.4 1 23 302 324 302 324 0.98

4 11 5e-08 7.9e-06 26.8 2.9 1 23 330 352 330 352 0.98

5 11 1.7e-07 2.8e-05 25.1 0.9 1 23 358 380 358 380 0.98

6 11 1.5e-05 0.0024 19.0 1.8 1 23 395 417 395 417 0.98

7 11 1.4e-08 2.2e-06 28.5 3.5 1 23 423 445 423 445 0.98

8 11 8.3e-06 0.0013 19.8 1.4 1 23 451 473 451 473 0.98

9 11 2.9e-08 4.6e-06 27.5 1.7 1 23 479 501 479 501 0.98

10 11 7.5e-06 0.0012 19.9 4.7 1 23 507 529 507 529 0.97

11 11 4.6e-07 7.4e-05 23.7 1.8 1 23 535 557 535 557 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0013	0.2	12.9	0.4	2	23	126	147	125	147	0.96
2	11	0.015	2.4	9.5	4.3	2	23	200	221	199	221	0.92
3	11	2.1e-06	0.00034	21.6	4.4	1	23	302	324	302	324	0.98
4	11	5e-08	7.9e-06	26.8	2.9	1	23	330	352	330	352	0.98
5	11	1.7e-07	2.8e-05	25.1	0.9	1	23	358	380	358	380	0.98
6	11	1.5e-05	0.0024	19.0	1.8	1	23	395	417	395	417	0.98
7	11	1.4e-08	2.2e-06	28.5	3.5	1	23	423	445	423	445	0.98
8	11	8.3e-06	0.0013	19.8	1.4	1	23	451	473	451	473	0.98
9	11	2.9e-08	4.6e-06	27.5	1.7	1	23	479	501	479	501	0.98
10	11	7.5e-06	0.0012	19.9	4.7	1	23	507	529	507	529	0.97
11	11	4.6e-07	7.4e-05	23.7	1.8	1	23	535	557	535	557	0.99

Sequence Information

Coding Sequence: ATGTTTATTGTAACGAAACATATTGACAGTGAAAATATAACTAAACTGTGTCGTACGTGTTTGAGAGAAGATGGGGAAAAAATGGTGTGTTTGTTTGTTGGTCCAGCAGGCTCATCATTGGCTGCAAAATTGAGATCCTTATCTTGTTTAGAGGTGTGGCAAGGAGATGGACTCCCTGAAAAATTATGCGATCGTTGTGTTACACGTGCCGAGTCGGCTCTACTGTTTCGAGAACAATGCAGAGCTGCTGATCGTGCGCTCAGACATGCAGCATCAAAGGTATCCGACCTGACCCGACCTGCGCCAGCCTCGAGTTGCAAATTGTACGAGCAAGTTCAAAATTTCGTCACCCCCAACTTCCCCCCCAGGCCCCTAAAATGCGTCGATTGTGGCTCTACCTTCCCAACCTACCAAGAGCTCTACACACACAGTAGACTGCACTCTCAATTTCTCCCTGACTCAGTCTCCATGCAACACATGCACATAGTTGAATCAACTCCCCCCTACTTCCCCCCAGAATCATCAATACCAAGTCCCGTAATAGAGCCCAATGGATCCCTAGACATGTCGAAGAACGAGAGACCAGCATGTGCACTTCACTGTTCCCTCTGCAACCACACCTTCCCCAATCGCAACCAGCTGATCAATCACAATTTTTCCCACACCAACGACAACCTCGACATATCCTGCGACAACGACAGCATTGACATCGGTGAAGACTGTCCAGAAATGGCAGAGAACCTGAGCTTCCACCAATACCCCAGAGACACCGATCAGACTATCTTAAATATGACCTACCCCCAAAACCTAACAGTTCCTGATTCACAAAGAATCCCACCGTCAGATATAATTTCCGACAGCACAGAAAACTTGAACTCCAAGTTTTCCCATGACAAAAAGAACCACAAATGCTCATTCTGCGGCAAAACATTTGCCCAAAAATCTAAACTAAAAACTCACGAGCTCACGCACACTGGGCAGCGACCTTTCAAGTGCAACGATTGCAACAAAAAATACACTTCCAAGAGTAAATTAAATGCACATATGAGATTACACAGCAGAACTAGTGTGTACGAATGCAAAGTCTGTGATAAAACCTTCACCTATCCATCCTATTTAAAGGAACACGAGAAGGTGCATAAAATTGGAGATAAGAAGATTGTGGAGAACAAGGAAAGAAAATTTGAATGTTCAATCTGTTCCAAGCAATTTCGATTGAAAAAAAATTTGAAAGGGCATTTAAGATTGCACAGTGGTGAGGGATTATTTCACTGTGAAATTTGTAATAAAGTTTTCAGTCAAAAATACAATCTTAAAAGCCACATGAGAATTCATAAAGGTGTTAAATTGCACAAGTGTGAGTATTGCTCGAAAGCATTTGCTGAGAGGGGAAATTATACGGAGCATTTGAGGATTCATACGAAGATTAAACCATTTGTTTGTAATGTATGTGGAAAAAGTTTTTCACAATCTAGTCATTTGAAGAGCCATGAGGCAACACATGAATCTGCAAGACCCCATCAGTGCACCTTGTGCGGCAAAACATTCAAGCTTCTTTCACATTTGAAGAGACATGCTAATTTACATTCTGCTGTCAAGAGTTTTAAGTGCAATCTTTGCGGGCAAATGTTTTCACAAGCGTTTAGTTTGAGGCGACATGTAAAAAGGCATACTGAGAGTTAG
Protein Sequence: MFIVTKHIDSENITKLCRTCLREDGEKMVCLFVGPAGSSLAAKLRSLSCLEVWQGDGLPEKLCDRCVTRAESALLFREQCRAADRALRHAASKVSDLTRPAPASSCKLYEQVQNFVTPNFPPRPLKCVDCGSTFPTYQELYTHSRLHSQFLPDSVSMQHMHIVESTPPYFPPESSIPSPVIEPNGSLDMSKNERPACALHCSLCNHTFPNRNQLINHNFSHTNDNLDISCDNDSIDIGEDCPEMAENLSFHQYPRDTDQTILNMTYPQNLTVPDSQRIPPSDIISDSTENLNSKFSHDKKNHKCSFCGKTFAQKSKLKTHELTHTGQRPFKCNDCNKKYTSKSKLNAHMRLHSRTSVYECKVCDKTFTYPSYLKEHEKVHKIGDKKIVENKERKFECSICSKQFRLKKNLKGHLRLHSGEGLFHCEICNKVFSQKYNLKSHMRIHKGVKLHKCEYCSKAFAERGNYTEHLRIHTKIKPFVCNVCGKSFSQSSHLKSHEATHESARPHQCTLCGKTFKLLSHLKRHANLHSAVKSFKCNLCGQMFSQAFSLRRHVKRHTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -