Basic Information

Insect: Asobara japonica
Gene Symbol: -
Assembly: GCA_017141405.1
Location: JADHZF010000064.1:1264098-1266303[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0013 0.21 12.8 1.3 2 23 57 78 56 78 0.90

2 18 0.0028 0.45 11.8 0.9 2 23 83 104 82 104 0.97

3 18 0.00067 0.11 13.7 0.6 1 23 110 132 110 132 0.97

4 18 1e-05 0.0016 19.5 3.1 1 23 138 160 138 160 0.97

5 18 3e-05 0.0048 18.0 0.1 2 23 170 191 170 191 0.97

6 18 0.045 7.1 8.0 0.5 3 23 199 218 198 218 0.96

7 18 2.5e-07 4e-05 24.6 0.8 3 23 226 246 225 246 0.97

8 18 0.0063 1 10.7 1.8 1 17 252 268 252 269 0.91

9 18 0.00041 0.065 14.4 10.3 1 23 342 364 342 364 0.98

10 18 6.5e-06 0.001 20.1 0.3 2 23 371 393 371 393 0.96

11 18 7.5e-06 0.0012 19.9 0.5 1 23 399 421 399 421 0.97

12 18 0.11 17 6.8 0.1 1 23 425 447 425 447 0.96

13 18 7e-06 0.0011 20.0 0.9 3 23 455 475 453 475 0.97

14 18 1.9e-05 0.0031 18.6 0.3 1 23 481 503 481 503 0.97

15 18 0.91 1.5e+02 3.9 6.6 1 23 510 532 510 532 0.97

16 18 1.2e-06 0.00019 22.4 0.3 1 23 538 560 538 560 0.98

17 18 4.4e-07 7e-05 23.8 0.9 1 23 566 588 566 588 0.98

18 18 3.6e-07 5.8e-05 24.0 1.1 1 23 594 616 594 616 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0013	0.21	12.8	1.3	2	23	57	78	56	78	0.90
2	18	0.0028	0.45	11.8	0.9	2	23	83	104	82	104	0.97
3	18	0.00067	0.11	13.7	0.6	1	23	110	132	110	132	0.97
4	18	1e-05	0.0016	19.5	3.1	1	23	138	160	138	160	0.97
5	18	3e-05	0.0048	18.0	0.1	2	23	170	191	170	191	0.97
6	18	0.045	7.1	8.0	0.5	3	23	199	218	198	218	0.96
7	18	2.5e-07	4e-05	24.6	0.8	3	23	226	246	225	246	0.97
8	18	0.0063	1	10.7	1.8	1	17	252	268	252	269	0.91
9	18	0.00041	0.065	14.4	10.3	1	23	342	364	342	364	0.98
10	18	6.5e-06	0.001	20.1	0.3	2	23	371	393	371	393	0.96
11	18	7.5e-06	0.0012	19.9	0.5	1	23	399	421	399	421	0.97
12	18	0.11	17	6.8	0.1	1	23	425	447	425	447	0.96
13	18	7e-06	0.0011	20.0	0.9	3	23	455	475	453	475	0.97
14	18	1.9e-05	0.0031	18.6	0.3	1	23	481	503	481	503	0.97
15	18	0.91	1.5e+02	3.9	6.6	1	23	510	532	510	532	0.97
16	18	1.2e-06	0.00019	22.4	0.3	1	23	538	560	538	560	0.98
17	18	4.4e-07	7e-05	23.8	0.9	1	23	566	588	566	588	0.98
18	18	3.6e-07	5.8e-05	24.0	1.1	1	23	594	616	594	616	0.98

Sequence Information

Coding Sequence: ATGAGAATAGTCGACGTAAAATCAATTGCTCTACCGAGACTTGTACCAATAAGAGGACTCAAACTAATACCAGTAAAAGCACTTAGACCTGCACCCCTAAAACCAGTTAAAACTCAGAAAAAGAAGCGATACAGATATCCAGACCCGCCGGAGGATCCTGAAAAATTGAAGTGTCCAATTTGCAGTAAAACATTTAAAAAAAGAGTATACCTAAATTTCCATGAGAAGGCCCACTATTCTCAATTGTCATGCCACTTATGCGATGCAAAATTGCCATCAAAATATTACCTAGATATTCATTTACGAAGGCATAATAAAGAGTTTCTCTATTTTTGTAAAGTGTGCGATAAAGGTTTTTACATAAGAGCATCGCTGGACTATCATATGGCTAAGCATACGGATGAAAAGCCATTTAATTGTGACATTTGTCATAAAGCTTTTGGTAACAAGGTCTATCTCCACAAGCACATGCTCATTCATAAGCCACCTAAAGAGATGGAGGAGCGTGTTTGTGAGATTTGCGGATATGTAACAAATCGTGCTGAATATTACAAGAGACATATGGCTAAGCACACTGGTGAGAGTAAGAAGGCCTGCACATTTTGTGGTAAATTAATAACAAAAGCTTACATGACGACACACATAAGGACTCACACTGGTGAGAAAACCGAGATTTGTGAATTTTGTGGTAAAACATTTTCATCGAAGGCTTATCTGGAGAAGCACAGAAGAGTGCACACTGGTGAGCGGCCATTTGAATGTAAAGTATGCCAAAAGAGATTCACCCAAAGAGAATGCCTAGAAGATGAGGATCTAATGTACTCACAGGCCGATTCATCGAATGTGGAGTACGAGTTGTACAGAATTGAAACAGTTCCAGCAGCTGATACAACTGGACTTTACCAAATAATTGAAAATGATGAAGATACTGGTTTAGCTGGAGATTGTTTGGTGCCCGCAGACTCGGAGCATTGTGAGCCACTCACTGATCCTCTACAGAAATCTCTCCCAAAGCCCCAGATTCATGAGTGCCACAGTTGTCCCAAAAAATTCCGAAAGAAGCATCAATTTTTGAAACACCTGCGCACTCATGATAAGAAAACAGATGAAACGTGTACAGAGTGTGATCAAACATTCCCCGATAATGAGAGACTACAGAGACACATGATCAGGGCTCATCAGAAGGACCGTCCCTTTCCGTGTGAGTTGTGCGGGAAAGCCTTCAAAACTGAGGAGTTCCTGAAAATTCACACTAAACAACACAACAAACGATTCATATGCGACATATGCGGCATTCCCAAGGTTTCCGGTTACGATCTTCGCTTGCATACCAAACGACATAATCAGGAATATACAACATTCTGCGATATATGCAACAAGGGCTTCTACACAAATCAAACGCTCGAGAGACACTTGTTGACGCACACTGGTGAAAAGCCCTTCATATGTAAAATATGCAACACTGCCTACTCCAGTGCCGCTTATCTCAATACTCATGTGAAGTCTCATGGTGTACAAAGGGAGAAACACAAATGTCATATTTGTCATTTTGAGAGTCACTGGAAAGCGGCATTGAAGGTCCACATGAAAATCCATACTGGTGACAATCAGTTTAATTGTGACTTGTGTGGTAAAGCAGTATCCAGTAAGACTTATTTGCGTATTCACATGAGAATTCATACGGGTGAGAGGCCACATGTGTGTGAAATTTGTGGACGTGCATTTACTGTTAAGAAGTATTTGATGGTTCACTTGAGGACACACACTGGGGAGAAGCCCTATGAGTGTAAAGTGTGTCAGAAAAGGTTTTCACAGCAAGGCAGTTTGAATTCCCATGTCAGGTTGCACAGTGAGGGAAAGTAG
Protein Sequence: MRIVDVKSIALPRLVPIRGLKLIPVKALRPAPLKPVKTQKKKRYRYPDPPEDPEKLKCPICSKTFKKRVYLNFHEKAHYSQLSCHLCDAKLPSKYYLDIHLRRHNKEFLYFCKVCDKGFYIRASLDYHMAKHTDEKPFNCDICHKAFGNKVYLHKHMLIHKPPKEMEERVCEICGYVTNRAEYYKRHMAKHTGESKKACTFCGKLITKAYMTTHIRTHTGEKTEICEFCGKTFSSKAYLEKHRRVHTGERPFECKVCQKRFTQRECLEDEDLMYSQADSSNVEYELYRIETVPAADTTGLYQIIENDEDTGLAGDCLVPADSEHCEPLTDPLQKSLPKPQIHECHSCPKKFRKKHQFLKHLRTHDKKTDETCTECDQTFPDNERLQRHMIRAHQKDRPFPCELCGKAFKTEEFLKIHTKQHNKRFICDICGIPKVSGYDLRLHTKRHNQEYTTFCDICNKGFYTNQTLERHLLTHTGEKPFICKICNTAYSSAAYLNTHVKSHGVQREKHKCHICHFESHWKAALKVHMKIHTGDNQFNCDLCGKAVSSKTYLRIHMRIHTGERPHVCEICGRAFTVKKYLMVHLRTHTGEKPYECKVCQKRFSQQGSLNSHVRLHSEGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -