Ajap010963.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- bab2
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000007.1:4087541-4093856[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-07 0.00041 20.7 0.1 2 39 290 327 289 333 0.89 2 2 4.5 2.6e+03 -1.0 0.0 33 42 330 339 327 341 0.85
Sequence Information
- Coding Sequence
- ATGGAGACAAATAGCAATTTACCGGCAGCCGCCAATTACCCAGGTGGTGATCGTCAACAATTCTGCGTATCCTGGAATTCTCACCAGTCTAATATGCACAGTGCATTTCCAAAATTATTGAGCTCGGAACAGTTTGTCGATGTGACACTGGCCTGCGATGGTGGCTCGATAAAGTGCCATAAAGTCGTATTGTCAGCGTGCAGTGATTATCTGGAGAGACTTCTTTTGGAAATTCCCTGCACTCATCCCATCATTTTCCTCAGGGATATGCGTATGTGGGAGCTGCAGGCACTCGTTGAGTTCATGTATCGTGGCGAGGTCTATGTTGAGCAGCAGCAGCTCACTAGGCTCATGCAAGCTGCTGAGGCACTACAGGTGCGTGGATTGTCATCCCAGGGGCGAGAAGGTACCCAAGGAGAGACTCCAACAGCACCGAGTGCCTCAAGCAACCCACCAACGCCTGCATCACCCTCAAAGCATCCCCAACCAACTTACACCAAGACCGAAGAGACCTCTACAGTAAACTCCACCGAGAACTTTGTTGACACTCCCGCTAGCGTAACACCAGCCACGATAAACAATGCATCAGCAACAGGCCCTCAAAATAATCCACCAGCTGCAAATTCCTCAACATTCATGAACATTGAGCACACCGAAGCACTTCAACATCTTGAAAAGGCTTTGAGCTCGTGCGAGGCTACACTTACAGAAACAACTGGACTCGTGAAAATGGAGCCGGATGAACAATTTTCCCAGCAGGACAAGCCTTATTCAATTAGTATGGTACCAACGAGCAATTCAAATTGCAGCAATCCCAACAGCCCTTTCCCAGCTATTGAAGGATATCAAAGACGACAGCGCCGTTCTGAGGCCGAGCTAAAGCAGGCATCGGACATGGTTGCACGTGGCATGACGTTTCAAGTTGCTTCCGAAAAATACAACATTCCGATCTCAACCATACGCTTTTACATGGTCAGAAAGGGCATTTTGCAGAGGCGAAAACGTGGACGTGGCTCGAGTAACTTAGGTGCGTCCAACAGTCAGCCTGGTAGTCCAGCAAGTCCGCCGTTTCACATGATGAATTATCGTTTGCCCGAGAGTCTGAACTCGAGTCTCCAATAG
- Protein Sequence
- METNSNLPAAANYPGGDRQQFCVSWNSHQSNMHSAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLEIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLTRLMQAAEALQVRGLSSQGREGTQGETPTAPSASSNPPTPASPSKHPQPTYTKTEETSTVNSTENFVDTPASVTPATINNASATGPQNNPPAANSSTFMNIEHTEALQHLEKALSSCEATLTETTGLVKMEPDEQFSQQDKPYSISMVPTSNSNCSNPNSPFPAIEGYQRRQRRSEAELKQASDMVARGMTFQVASEKYNIPISTIRFYMVRKGILQRRKRGRGSSNLGASNSQPGSPASPPFHMMNYRLPESLNSSLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001518;
- 90% Identity
- iTF_00168635;
- 80% Identity
- iTF_00168635;