Ajap021237.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- -
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000035.1:342462-346053[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-08 1.3e-05 25.5 0.0 2 33 10 40 9 45 0.93 2 2 8.4 4.8e+03 -1.9 0.0 4 13 330 339 328 340 0.83
Sequence Information
- Coding Sequence
- ATGGTCTCCAAAGAGCGAAATTATACTGCAGAAGCGCTGGAAAAAGCACTGGACGCTTTGGAAACTGGCCTAACTCTTAGATCAGCGAGTAAGCTCTACGGTGTACCCAAATCGACGCTTTTCAGCAAAGCAACCGGCCAAACCGCCCCCGTGATAATGAAAAAAGGCCCCGCATCTGTCATAAGCGCTGTGGACGAGGCTAAATTAGTCGATTGGATATTATCCCTGAACCACCGCGGTTGCCCCATCTCCAAAGCCCAGTTACTGGACAGCGTGGAAATGCTCACTAACCCAAAAAAGCAAGATGCCGGATGCAAAGAGTACCGTCCCGGCCGTCACTGGTACGAGAATTTCCTGAAAAGACATCCTCAATTGCATGGAAAGTTATCACAAAAACCGCTAAATGGTTCGACTGTAACTGAAGCCCATATTCGAGATTGGTTTGATAGAACGAAGAGCTACCTAGAGAAACGCAATCTCCAGAATGTGGATCCATCACGTGTTTTCAATTGTGCTGAGTCGTCATTTAGTTTGTCCCCACCAGAGACATCATCGAAGCCCCACCAGGGAAATGAACCTCCAATCCTTGCAGAGAATAACAATCAGGATAGTCAAACTGTACTTTTTTGTGCAAATGCTAGAGGAGACTTGGTTGATCCTATGATTGAGCTGATAGTATTGCAACCAAGTACGAGGTATATGATGCAACCGTGGGACGTAAGCTGCTTTGGCTCCTTGAGGTCTTCCTGGAGAAATGAGGTGCATCAGTGGAGGGTGAAAAATCAGGGAGATCACATGAGGAAGGGCGATTTTGTTGTGGTTTTAAAACGTGCTATGGACACTATGGACTGGAGGTCGATTCTGCCTCGGGCATTTCAAGCAGCGGGACTTCATCCGTTCACACCGAAGGGAATTCATTTCCAGAAGCATTTTGGGACGACTACATGCCACAAGATTGAGGAGACATCTGTGACAAATATTGAGATGACCCTTTTGGAAGCTGTCGAGAGCTACATGGAGGCTGATATTGTCTGTCAGTTTAGACTTGTTGGCGATGAGGAAGAGTGGGCTGGGAATGAATTATATCGAGTGCATTTTGAGTTCTGGAGACGAGTGAAGCTCCAAACACCGATAGAACATGATTGCTCAAGGGTGAACGAGTACGAGTTTCAGGATACGAACGACGGAAGCTGTATGATGAAGCTCTTTTATGATGACTCTGCCAGTCCTGTAAATCATCTCAATGATGATACTGGAGAATCTTCAACGGGGGAAAAAAATTGTCTATCGCAACACTCAATGTTGTTGGCAAAATCTGACGATGCTCTTAGTTTTCATCTTATGGACAACGGAGAGTTGAGGTTGATTGACGATTGA
- Protein Sequence
- MVSKERNYTAEALEKALDALETGLTLRSASKLYGVPKSTLFSKATGQTAPVIMKKGPASVISAVDEAKLVDWILSLNHRGCPISKAQLLDSVEMLTNPKKQDAGCKEYRPGRHWYENFLKRHPQLHGKLSQKPLNGSTVTEAHIRDWFDRTKSYLEKRNLQNVDPSRVFNCAESSFSLSPPETSSKPHQGNEPPILAENNNQDSQTVLFCANARGDLVDPMIELIVLQPSTRYMMQPWDVSCFGSLRSSWRNEVHQWRVKNQGDHMRKGDFVVVLKRAMDTMDWRSILPRAFQAAGLHPFTPKGIHFQKHFGTTTCHKIEETSVTNIEMTLLEAVESYMEADIVCQFRLVGDEEEWAGNELYRVHFEFWRRVKLQTPIEHDCSRVNEYEFQDTNDGSCMMKLFYDDSASPVNHLNDDTGESSTGEKNCLSQHSMLLAKSDDALSFHLMDNGELRLIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -