Ajap026717.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- -
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000069.1:1285326-1287586[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-09 1.5e-06 28.6 0.1 5 38 1 34 1 38 0.95
Sequence Information
- Coding Sequence
- ATGGCTCGTGCAATTGATGCTTGCGTAAATCATGGAATGAGATTGCGCACCGCAGCAAGGCTATATTGTATCCCTAGATCAACGATAAGACGCAGAAAACAACTCTATCAACAATGTCCAGATATGGAGATGGTTTGTCAAAAAGGAATGGGGAGTCGCCAAGCGGTTTTCAGTCTACTCCAAGAAGAAGCTCTAGTGAAATATGTATTGGAGCCAGAGGCAAGGCTGCATGGACTCACAACTAAAGAGTTGAGAATGATTGCCTGGCAAATAGCTAAGAAGAATCATTTAATTCATCCTTTCCAAGATGGTAGAGCCGGAAGAGACTGGATGACAGGTTTCCTGGAAAGAAACCCTACTGTATCGCTGCGAAAGCCAGAGTCAGTTTCAACGTATAGGGCATCAGCGCTTTATAGGACTCTTGTAGGTAACTTTTTCGACTTACTAGAGAGCCAACTGACATTACCTGGAGTCTTCGATGGGGCGCAAGATTTCCTCCTGGTAGGATCTGGAATGTCGATGAAACCGCGGAAGGGTAAACGTCAAGTTGGGAAAGTAGTGTCCAGTGACAAAGGCCGACACATTACAGCTGAATTGTGTATTTCTGCAGCAGGTGAGGCATTGCCACCCCTAATCATTTTCCCTCGTGAGAGGATGAAAGATAGTCTACTCGAAAGCGCTTCAGAAGGGATTGTCCCATTCAATCGGGATGTATTTTCTGATGCGGATTATGCACCCGCTGAAGTTACGAACCCTCCTTCACCTGATTCACCCCATCCGCAGCCAGAATCTGAGCACCAAACATTTGGTGAGGCGGAGACGCTCGAGCGATCGTACAGGAGATTGTCTGTTCACGATGTACAGGAAGAGGTTCAGCGAGTTGAAGACGGCGACTATGAAGATGCCCCTTCGAGACGTCTCAGTCCCTTCCAGCTCTTGTCCGATTGCGATGGAAACGAATCAGACGGTGAAACAGACACCATAACCATAATAACACCAGAAAATGAGACCGATACCCCATTAGAATCCGACCCTGACGTTCATCGCTCTTCAGAAGATCCCTCATCAGCAGCGCCTGGAAGAAGAGCTGCGAAACGCAGAAAGCCGAATGGAAGCCACCAATGTCCTATATCCAGTACTGAGCCTTCATTAGATGACACTTCTCATACACGACCAAAAAGGAGCACTAATCTCCCTAAAGTGCCTGAGAGTTCAGAGGAAGAAGGGACGGTGCTACGAACCGTCGTCAATCGAGAGAAACGCACGGGGCGGCCTCGCGGAAAAACCGCTGTGCTGACCTCGGATGAGTACAGAGAAAATTTGAGTAAAGATCTGCAGGAGAAACCGAACAAAGGCAGAACAGAAGAAGACGAAATATGGATTCAGTGTGACGACTGTGGAGAATGGGCTCATGCTCTATGTGCAGGACTATCTCCCCACAACTACAGTGAAGATCCGGAAGCTTTGTCCGCGTGTTTAGTTGGGCCTAGATCGTTGCCTGTGAGATAA
- Protein Sequence
- MARAIDACVNHGMRLRTAARLYCIPRSTIRRRKQLYQQCPDMEMVCQKGMGSRQAVFSLLQEEALVKYVLEPEARLHGLTTKELRMIAWQIAKKNHLIHPFQDGRAGRDWMTGFLERNPTVSLRKPESVSTYRASALYRTLVGNFFDLLESQLTLPGVFDGAQDFLLVGSGMSMKPRKGKRQVGKVVSSDKGRHITAELCISAAGEALPPLIIFPRERMKDSLLESASEGIVPFNRDVFSDADYAPAEVTNPPSPDSPHPQPESEHQTFGEAETLERSYRRLSVHDVQEEVQRVEDGDYEDAPSRRLSPFQLLSDCDGNESDGETDTITIITPENETDTPLESDPDVHRSSEDPSSAAPGRRAAKRRKPNGSHQCPISSTEPSLDDTSHTRPKRSTNLPKVPESSEEEGTVLRTVVNREKRTGRPRGKTAVLTSDEYRENLSKDLQEKPNKGRTEEDEIWIQCDDCGEWAHALCAGLSPHNYSEDPEALSACLVGPRSLPVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -